| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397637
Identifier: 150397637
GI number: 150397637
Start: 2517192
End: 2518064
Strand: Reverse
Name: 150397637
Synonym: Smed_2437
Alternate gene names: NA
Gene position: 2518064-2517192 (Counterclockwise)
Preceding gene: 150397638
Following gene: 150397636
Centisome position: 66.58
GC content: 62.31
Gene sequence:
>873_bases GTGGATAGGCTAGGCAATTCCGGCTCGGTAAAAGAGAGACTTGCGGAAATCTGCGATGCGCAGCCTTTCGTGACGCGTTT CCTCGTCCGCAATCTCAAGACGGGCGAGACGATCGAACGCGGCGCGGAGGAGGAAACGCCTTCCGCCAGCACCCGTAAGA CCTCCATCATGATGGCGGCGCTGAAGGCGGTGCACGAGCGGCGGCTCGACCTCGAAGAGCCGATCACCTACGAAGCCCGC TTTGCCGAGGAAGTGGCAAGCGGCATGTTCCGCTACCTCACGCCCGGAATCGTGATTTCGTTGCGCGATGCGATTACCGG AATGATGGTGCTGAGCGACAATGTCTGCACCAGGATGGTGTTCGAGCGGCTGACGCTGGAGGAGGTCGACTGCTACTGCA AGTCGATCGGCATGAAAGGCACGCATCATCGCTTTCTCATTCCGCCCTTGGCTCTGCCGCCGGATCATGCGCTGACCTCG GTGACGACCACGACTGCCCGCGACCAGGCCTTTCTGCTGCAGACGATCCTGGACGCGCAGGCCTCTCCCGAAGCGGCCGC AAAGCTCGGCACGTCACCGGAGCTCTGCGCCTATGCCCTGCAGACTCTCAAGAACCAGATCCTGCGCTACGCAATTCCGT CGCGCCTGCCTTTCGGCACGGTGGTGGCGCATAAGGGCGGCACGGGCAAGCGCGGCCGCATGAATGCCGGCATCGTCTAT CGCGACGGCGCTCCCTTCTACATCATCTGCGCCTATACCGATGACGTGCCGCAGGTCATGCCGGACGGCACGCCGGGTTA CACGGTGGCGCTCGAGACCATCGGCAGGCTCTCGCGGGCCTGCTGGGACGGATTCAGTCATAACGATCAATAA
Upstream 100 bases:
>100_bases CCGAAGGAGGCCTATACGCGCCGGCTTCTTTCGGCGATTCCCGCCCTCGACCAGAATGAAAACGGCGGCGTGACTCTCAA ATGGTGTCTGGAGAATTGAT
Downstream 100 bases:
>100_bases GAGGGTAGAACAAATGAAAACGCTTCTTCTTGCGGGCACCGCCCTGCTTGCCATGACCGGTATCGCAACGGCACGCGACA TCACCGTCGCGCAAAGTTCT
Product: putative beta-lactamase protein
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Protein; Peptidase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MDRLGNSGSVKERLAEICDAQPFVTRFLVRNLKTGETIERGAEEETPSASTRKTSIMMAALKAVHERRLDLEEPITYEAR FAEEVASGMFRYLTPGIVISLRDAITGMMVLSDNVCTRMVFERLTLEEVDCYCKSIGMKGTHHRFLIPPLALPPDHALTS VTTTTARDQAFLLQTILDAQASPEAAAKLGTSPELCAYALQTLKNQILRYAIPSRLPFGTVVAHKGGTGKRGRMNAGIVY RDGAPFYIICAYTDDVPQVMPDGTPGYTVALETIGRLSRACWDGFSHNDQ
Sequences:
>Translated_290_residues MDRLGNSGSVKERLAEICDAQPFVTRFLVRNLKTGETIERGAEEETPSASTRKTSIMMAALKAVHERRLDLEEPITYEAR FAEEVASGMFRYLTPGIVISLRDAITGMMVLSDNVCTRMVFERLTLEEVDCYCKSIGMKGTHHRFLIPPLALPPDHALTS VTTTTARDQAFLLQTILDAQASPEAAAKLGTSPELCAYALQTLKNQILRYAIPSRLPFGTVVAHKGGTGKRGRMNAGIVY RDGAPFYIICAYTDDVPQVMPDGTPGYTVALETIGRLSRACWDGFSHNDQ >Mature_290_residues MDRLGNSGSVKERLAEICDAQPFVTRFLVRNLKTGETIERGAEEETPSASTRKTSIMMAALKAVHERRLDLEEPITYEAR FAEEVASGMFRYLTPGIVISLRDAITGMMVLSDNVCTRMVFERLTLEEVDCYCKSIGMKGTHHRFLIPPLALPPDHALTS VTTTTARDQAFLLQTILDAQASPEAAAKLGTSPELCAYALQTLKNQILRYAIPSRLPFGTVVAHKGGTGKRGRMNAGIVY RDGAPFYIICAYTDDVPQVMPDGTPGYTVALETIGRLSRACWDGFSHNDQ
Specific function: Unknown
COG id: COG2367
COG function: function code V; Beta-lactamase class A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 31908; Mature: 31908
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRLGNSGSVKERLAEICDAQPFVTRFLVRNLKTGETIERGAEEETPSASTRKTSIMMAA CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHH LKAVHERRLDLEEPITYEARFAEEVASGMFRYLTPGIVISLRDAITGMMVLSDNVCTRMV HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHH FERLTLEEVDCYCKSIGMKGTHHRFLIPPLALPPDHALTSVTTTTARDQAFLLQTILDAQ HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHEECCCHHHHHHHHHHHHHCC ASPEAAAKLGTSPELCAYALQTLKNQILRYAIPSRLPFGTVVAHKGGTGKRGRMNAGIVY CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEE RDGAPFYIICAYTDDVPQVMPDGTPGYTVALETIGRLSRACWDGFSHNDQ ECCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDRLGNSGSVKERLAEICDAQPFVTRFLVRNLKTGETIERGAEEETPSASTRKTSIMMAA CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHH LKAVHERRLDLEEPITYEARFAEEVASGMFRYLTPGIVISLRDAITGMMVLSDNVCTRMV HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCHHHHHHH FERLTLEEVDCYCKSIGMKGTHHRFLIPPLALPPDHALTSVTTTTARDQAFLLQTILDAQ HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHEECCCHHHHHHHHHHHHHCC ASPEAAAKLGTSPELCAYALQTLKNQILRYAIPSRLPFGTVVAHKGGTGKRGRMNAGIVY CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCEEE RDGAPFYIICAYTDDVPQVMPDGTPGYTVALETIGRLSRACWDGFSHNDQ ECCCCEEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA