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The map label for this gene is ydeD [C]

Identifier: 150397631

GI number: 150397631

Start: 2510557

End: 2511483

Strand: Reverse

Name: ydeD [C]

Synonym: Smed_2431

Alternate gene names: 150397631

Gene position: 2511483-2510557 (Counterclockwise)

Preceding gene: 150397635

Following gene: 150397616

Centisome position: 66.41

GC content: 60.63

Gene sequence:

>927_bases
ATGGAGCACCACTTGACCCCTATCGAGACCTTCATGACCGACCTGCCGTCGTCCTGGCCAGCCGCTGGCCGCCACTTCCT
CTGGCCTTTAATGGCAACACTGCTGGTGATCGGCTGGAGTTCGGGCTTCGTCGGTATCCGCTATGCGAGCGAAGAAGCCA
CCGTCGTACTGGTGCTGTTCTGGCGGACGCTGTTGTCAGGCGTGATCCTGCTGCCCTTCGCCTTTGCCATCGGGCCGCGA
ATGCGGCTGCGCGGGGTGCTGGAGCAGATGCTCTTCGGTGTGATGTCGGTGTTTCTCTATCTGGGCGGCTTCGCATTGGC
GATCGAGCAACGGGTGCCGACAGGCCTGGTCGCATTGATTTCGGACCTCCTGCCTTTGGCGATAGCGGCCCTGTCGCAGT
CTGTCCTGGGCGAGCGACTAAGCGCGCGGCAGTGGCTGGGAACGTCGATCGCGGTGCTGGGTGTGCTCATCGTCTCGTTC
GACAGCCTGAGCCTCGGCGTAGCTCCTTTGTGGGCCTATGCGCTGACAGCCGGCTCGATGCTGGTCTTTGCGCTCGCCTC
CGTGCTGCATAAACGGCAACGGACTTCGCACATGCCGCTTCACCAGAGCCTTTGCATTCATACGCTCACAGGTGCTTTGC
TGTTCGGATTTTGCGCCATGATGCAGGGCGGTGTTGTCCCGCCGATGACACGCAATTTCGCCGTGGGAATGGTATGGCTG
GTATTGATTGCAACCTTCGCCGCCTATTCCGTCTACTATAGCAGTCTGCGCCTTTTCCCGGTGGCGAAGGTCAGCGCGGT
GATCTATCTCAGCCCGCCGGTCACCATGCTGTGGGCATGGGTATTGTTTTCCGAGCCTCTGACCTTAGCGATGTTCATCG
GACTGGCAGTGACACTGCTGGGCGTCTGGATGACCTCGCGCGCTTGA

Upstream 100 bases:

>100_bases
ACACCCGGGCCGTGTTGCAAATGGGCATTACATTGATGACTGCACTGTCATGCTTTCATCGATATTTGTCATGTGCAAGC
GCAACAGGTGCATCCTATTC

Downstream 100 bases:

>100_bases
ACCGGGCGACCCATCGTCGACCGCGCCGGTAAGCATGATACGTTTGATCGGATAACGCTGGCAGAAACGTTTCAGTGCTT
CAAGGAACACCGAAACGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Permease DMT Superfamily; DMT Family Permease; Transmembrane Protein; DMT(Drug/Metabolite Transporter) Superfamily Permease; Drug/Metabolite Transporter Superfamily Permease; Integral Membrane; Permeases Of Drug/Metabolite Transporter

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MEHHLTPIETFMTDLPSSWPAAGRHFLWPLMATLLVIGWSSGFVGIRYASEEATVVLVLFWRTLLSGVILLPFAFAIGPR
MRLRGVLEQMLFGVMSVFLYLGGFALAIEQRVPTGLVALISDLLPLAIAALSQSVLGERLSARQWLGTSIAVLGVLIVSF
DSLSLGVAPLWAYALTAGSMLVFALASVLHKRQRTSHMPLHQSLCIHTLTGALLFGFCAMMQGGVVPPMTRNFAVGMVWL
VLIATFAAYSVYYSSLRLFPVAKVSAVIYLSPPVTMLWAWVLFSEPLTLAMFIGLAVTLLGVWMTSRA

Sequences:

>Translated_308_residues
MEHHLTPIETFMTDLPSSWPAAGRHFLWPLMATLLVIGWSSGFVGIRYASEEATVVLVLFWRTLLSGVILLPFAFAIGPR
MRLRGVLEQMLFGVMSVFLYLGGFALAIEQRVPTGLVALISDLLPLAIAALSQSVLGERLSARQWLGTSIAVLGVLIVSF
DSLSLGVAPLWAYALTAGSMLVFALASVLHKRQRTSHMPLHQSLCIHTLTGALLFGFCAMMQGGVVPPMTRNFAVGMVWL
VLIATFAAYSVYYSSLRLFPVAKVSAVIYLSPPVTMLWAWVLFSEPLTLAMFIGLAVTLLGVWMTSRA
>Mature_308_residues
MEHHLTPIETFMTDLPSSWPAAGRHFLWPLMATLLVIGWSSGFVGIRYASEEATVVLVLFWRTLLSGVILLPFAFAIGPR
MRLRGVLEQMLFGVMSVFLYLGGFALAIEQRVPTGLVALISDLLPLAIAALSQSVLGERLSARQWLGTSIAVLGVLIVSF
DSLSLGVAPLWAYALTAGSMLVFALASVLHKRQRTSHMPLHQSLCIHTLTGALLFGFCAMMQGGVVPPMTRNFAVGMVWL
VLIATFAAYSVYYSSLRLFPVAKVSAVIYLSPPVTMLWAWVLFSEPLTLAMFIGLAVTLLGVWMTSRA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33589; Mature: 33589

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHHLTPIETFMTDLPSSWPAAGRHFLWPLMATLLVIGWSSGFVGIRYASEEATVVLVLF
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
WRTLLSGVILLPFAFAIGPRMRLRGVLEQMLFGVMSVFLYLGGFALAIEQRVPTGLVALI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SDLLPLAIAALSQSVLGERLSARQWLGTSIAVLGVLIVSFDSLSLGVAPLWAYALTAGSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVFALASVLHKRQRTSHMPLHQSLCIHTLTGALLFGFCAMMQGGVVPPMTRNFAVGMVWL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VLIATFAAYSVYYSSLRLFPVAKVSAVIYLSPPVTMLWAWVLFSEPLTLAMFIGLAVTLL
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
GVWMTSRA
HHHHHCCC
>Mature Secondary Structure
MEHHLTPIETFMTDLPSSWPAAGRHFLWPLMATLLVIGWSSGFVGIRYASEEATVVLVLF
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHH
WRTLLSGVILLPFAFAIGPRMRLRGVLEQMLFGVMSVFLYLGGFALAIEQRVPTGLVALI
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SDLLPLAIAALSQSVLGERLSARQWLGTSIAVLGVLIVSFDSLSLGVAPLWAYALTAGSM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVFALASVLHKRQRTSHMPLHQSLCIHTLTGALLFGFCAMMQGGVVPPMTRNFAVGMVWL
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VLIATFAAYSVYYSSLRLFPVAKVSAVIYLSPPVTMLWAWVLFSEPLTLAMFIGLAVTLL
HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHH
GVWMTSRA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA