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The map label for this gene is coxM [H]

Identifier: 150397625

GI number: 150397625

Start: 2503024

End: 2503968

Strand: Direct

Name: coxM [H]

Synonym: Smed_2425

Alternate gene names: 150397625

Gene position: 2503024-2503968 (Clockwise)

Preceding gene: 150397624

Following gene: 150397626

Centisome position: 66.18

GC content: 59.47

Gene sequence:

>945_bases
ATGGCCGTGGTAGTGATTCTGGTTCTGCTGGCCGTCGGCTCAGTGTTGTTCCATTTGCTCAGTCCTTGGTGGTGGACTCC
AATCGCCTCCAATTGGATTTACATCGACAATACGATCACCATCACCTTCTGGATCACCGGCATCGCCTTCACCGCCGTCG
TCCTGTTCATGGCCTATTGTGTCCTGCGATTCCGCCACCGTCCGGGCAATATTGCCGCTTATGAGCCCGAGAACAGAAGG
CTCGAAGGCTGGCTGGCGACCGGTACCACCTTCGGTGTCGCGGCAATGCTGGCTCCGGGCCTCTTCGTTTGGAACCAGTT
CGTCACCGTCCCGCAGGATGCATCCGAAGTGGAGGTGATCGGCCAGCAATGGCTGTGGAGCTTCCGGCTGCCCGGGGCGG
ACGGGAAGCTCGGCACCACCGAAACGCGCAATATCGTGCCGGAAAATTCGCTCGGGCTGAATACGAACGATGCCGCCGGA
CAGGACGACCTCATCATCGAAGGCGGCGAGCTTCACCTGCCTGTCGGCAAACCGGTCAAGATGCTGCTGCGGTCGGTCGA
CGTCCTGCATGATTTCTACGTCCCCGAATTCCGCGCCAAGATGGATATGGTGCCCGGCATGATCACCTATTTCTGGTTCA
CGCCGACGCGGACCGGAACTTTCGAGATACTCTGCGCCGAACTCTGCGGCGTCGGTCACCCGCAGATGCGCGGCACCGTC
GTGGTGGACACCGAAGAGGATTACCAGGTCTGGCTCGCCGAGCAGCAGAGTTTTTCGCAACTCTCCGCATCGACGGAAAC
AAGAGCAATTCCAGGAAAAGTATGTAGCGGTGTTCCGTCCGGAGTTGCGACTGAACAAGGAACTGGAGCATTCACGCTTT
TCGAAGAAGAGCGTGAATGCTCCAGCCCCACGGCGACAGCGGTCGCCGCCTCAGCGGCGCAGTAG

Upstream 100 bases:

>100_bases
CGATGAATTGCCAGTATTTTCCGTTCGTGTAATAATTGTGATCGGAACTCTGCGGATTGCGTATTCGTCTCACGGCCGAT
GACGGCGGGGAGGACAGGAA

Downstream 100 bases:

>100_bases
GAGGCGCCGTGCAGTAGCCCCTGGGAGGAGATATGATGGTCGACGTCCGGTCCGGTATTGGCGAGGCACTCCCGCCTCCC
GAAGTCGAGGATGTTGAGCT

Product: cytochrome c oxidase subunit II

Products: NA

Alternate protein names: Alternative cytochrome c oxidase polypeptide II; Cytochrome BB3 subunit 2; Oxidase BB(3) subunit 2 [H]

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MAVVVILVLLAVGSVLFHLLSPWWWTPIASNWIYIDNTITITFWITGIAFTAVVLFMAYCVLRFRHRPGNIAAYEPENRR
LEGWLATGTTFGVAAMLAPGLFVWNQFVTVPQDASEVEVIGQQWLWSFRLPGADGKLGTTETRNIVPENSLGLNTNDAAG
QDDLIIEGGELHLPVGKPVKMLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWFTPTRTGTFEILCAELCGVGHPQMRGTV
VVDTEEDYQVWLAEQQSFSQLSASTETRAIPGKVCSGVPSGVATEQGTGAFTLFEEERECSSPTATAVAASAAQ

Sequences:

>Translated_314_residues
MAVVVILVLLAVGSVLFHLLSPWWWTPIASNWIYIDNTITITFWITGIAFTAVVLFMAYCVLRFRHRPGNIAAYEPENRR
LEGWLATGTTFGVAAMLAPGLFVWNQFVTVPQDASEVEVIGQQWLWSFRLPGADGKLGTTETRNIVPENSLGLNTNDAAG
QDDLIIEGGELHLPVGKPVKMLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWFTPTRTGTFEILCAELCGVGHPQMRGTV
VVDTEEDYQVWLAEQQSFSQLSASTETRAIPGKVCSGVPSGVATEQGTGAFTLFEEERECSSPTATAVAASAAQ
>Mature_313_residues
AVVVILVLLAVGSVLFHLLSPWWWTPIASNWIYIDNTITITFWITGIAFTAVVLFMAYCVLRFRHRPGNIAAYEPENRRL
EGWLATGTTFGVAAMLAPGLFVWNQFVTVPQDASEVEVIGQQWLWSFRLPGADGKLGTTETRNIVPENSLGLNTNDAAGQ
DDLIIEGGELHLPVGKPVKMLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWFTPTRTGTFEILCAELCGVGHPQMRGTVV
VDTEEDYQVWLAEQQSFSQLSASTETRAIPGKVCSGVPSGVATEQGTGAFTLFEEERECSSPTATAVAASAAQ

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A ce

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6226540, Length=144, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR002429
- InterPro:   IPR011759 [H]

Pfam domain/function: PF00116 COX2 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 34484; Mature: 34353

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVVVILVLLAVGSVLFHLLSPWWWTPIASNWIYIDNTITITFWITGIAFTAVVLFMAYC
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEEHHHHHHHHHHHHHHHH
VLRFRHRPGNIAAYEPENRRLEGWLATGTTFGVAAMLAPGLFVWNQFVTVPQDASEVEVI
HHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHCHHHHHHHEEECCCCCHHHHHH
GQQWLWSFRLPGADGKLGTTETRNIVPENSLGLNTNDAAGQDDLIIEGGELHLPVGKPVK
HHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCHHH
MLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWFTPTRTGTFEILCAELCGVGHPQMRGTV
HHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEE
VVDTEEDYQVWLAEQQSFSQLSASTETRAIPGKVCSGVPSGVATEQGTGAFTLFEEEREC
EEECCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECHHHC
SSPTATAVAASAAQ
CCCCHHHHHHCCCC
>Mature Secondary Structure 
AVVVILVLLAVGSVLFHLLSPWWWTPIASNWIYIDNTITITFWITGIAFTAVVLFMAYC
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEEEEHHHHHHHHHHHHHHHH
VLRFRHRPGNIAAYEPENRRLEGWLATGTTFGVAAMLAPGLFVWNQFVTVPQDASEVEVI
HHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHCHHHHHHHEEECCCCCHHHHHH
GQQWLWSFRLPGADGKLGTTETRNIVPENSLGLNTNDAAGQDDLIIEGGELHLPVGKPVK
HHHHEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEECCCCHHH
MLLRSVDVLHDFYVPEFRAKMDMVPGMITYFWFTPTRTGTFEILCAELCGVGHPQMRGTV
HHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEE
VVDTEEDYQVWLAEQQSFSQLSASTETRAIPGKVCSGVPSGVATEQGTGAFTLFEEEREC
EEECCCCCEEEEHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECHHHC
SSPTATAVAASAAQ
CCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1444719; 12597275 [H]