Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is 150397591

Identifier: 150397591

GI number: 150397591

Start: 2467002

End: 2468108

Strand: Direct

Name: 150397591

Synonym: Smed_2391

Alternate gene names: NA

Gene position: 2467002-2468108 (Clockwise)

Preceding gene: 150397576

Following gene: 150397598

Centisome position: 65.23

GC content: 56.28

Gene sequence:

>1107_bases
ATGCGCAAGGGTGGCGTTAGATCTACCGTCGAAGCAGAGAATACACTGGTGTTCGAACTTCGCCGCGGCGCGATTACGAA
TAACGGCGCCACACCATGGTGGGTTTCCGCCACTGTTGGGACGAGCACCGTACCGCAGACTTTCAAGTTCATGATGGACA
CCGGAACAACCAACACATGGGTTACGGCGAAGAGCTGCTCCACCAGTGAATGCACACAGCACGATTCCTTCGACGAAACC
GCGTCCTCGACCTTCGTCTGGCAAGACCAGTCACTGACACCCATCGACTTCAGCGGTTGGGGGAACATGGACGTCAACCT
CGGAAATGACGTATGGGTTCTGTCTGACAAGAACGCCATCGACCAGGACGTCACCGTCGACTTCTGGCTCAGCCAGTCCT
ATTCCGGGGCCCGTTTTGGCGAACTTATCCAGGATGGGTTCATCGCCTGCGGTCCCTACGGTGACAATTCCCGGTCGAAT
TTGATTTTCGACGCGCTGTGGTACTCCGGTGCACTGGCTTCGCCGTGGATGTCCTATTGGGTCGATTACACGATCGACGG
TGCAGCAGTCGACAGCGGCGAGATGATTTTTGGCGGCAGCAATGCCGACAAATACGACCCGGACACTGTTATCTCCCTCG
ATATCGTACCGGGAATCTGGACTCACATGGGCGATTCGATCGTCGTTGACGGTGCCGAGATATTTACGTCTCCCGCACTG
CTGATCGACACGGGTGCCTCTGAAATCAAAGGAGAGCAGGCGGAGATCGATAAATTGATTGCCGCAGTAACGCTGGACGG
GCAGCTGCCGCTTTCTCCCGACAACCCGGATCACTATGCCTATCCCGACCTGGTCTTCAATCTTGGAAAGACCAGCGACG
GCAGCACCGGGCAGTTGGTCTTCCCGCCCCGCGCCTATTTCAACTATATCGAGGCAGGCACAGACCAAGGAAAATGGCAG
ATTGCGATGACCGTTCTTGAAGACCTTGGAGAAAACTCCCTGATCTTCGGCCGCAATCTTCTCGATCGGCTGTATTCGGA
GTGGGAATACGACACCTCGGGCACGTCGGTCGCCGGGAAAACCATCCGGCTGGCACAACGGGTCTAG

Upstream 100 bases:

>100_bases
ATTGCAAAATGTCAAGTATGAAAAAGCTAGTAGCAATGAAAGAACGAACATGAAAAAGAACGAAATTATACTTTCGCAAA
GAGAGGTGTATCGGACAAAG

Downstream 100 bases:

>100_bases
TTTAACCAGGCGCCGGGAGGACATGTCCTCCCGGCGCGCCCAAAACGATGGAAGGCCCGGCGCTTGGCGCCGGGCCTTCT
GGATTACCTTCGAAAAGAAC

Product: peptidase A1 pepsin

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MRKGGVRSTVEAENTLVFELRRGAITNNGATPWWVSATVGTSTVPQTFKFMMDTGTTNTWVTAKSCSTSECTQHDSFDET
ASSTFVWQDQSLTPIDFSGWGNMDVNLGNDVWVLSDKNAIDQDVTVDFWLSQSYSGARFGELIQDGFIACGPYGDNSRSN
LIFDALWYSGALASPWMSYWVDYTIDGAAVDSGEMIFGGSNADKYDPDTVISLDIVPGIWTHMGDSIVVDGAEIFTSPAL
LIDTGASEIKGEQAEIDKLIAAVTLDGQLPLSPDNPDHYAYPDLVFNLGKTSDGSTGQLVFPPRAYFNYIEAGTDQGKWQ
IAMTVLEDLGENSLIFGRNLLDRLYSEWEYDTSGTSVAGKTIRLAQRV

Sequences:

>Translated_368_residues
MRKGGVRSTVEAENTLVFELRRGAITNNGATPWWVSATVGTSTVPQTFKFMMDTGTTNTWVTAKSCSTSECTQHDSFDET
ASSTFVWQDQSLTPIDFSGWGNMDVNLGNDVWVLSDKNAIDQDVTVDFWLSQSYSGARFGELIQDGFIACGPYGDNSRSN
LIFDALWYSGALASPWMSYWVDYTIDGAAVDSGEMIFGGSNADKYDPDTVISLDIVPGIWTHMGDSIVVDGAEIFTSPAL
LIDTGASEIKGEQAEIDKLIAAVTLDGQLPLSPDNPDHYAYPDLVFNLGKTSDGSTGQLVFPPRAYFNYIEAGTDQGKWQ
IAMTVLEDLGENSLIFGRNLLDRLYSEWEYDTSGTSVAGKTIRLAQRV
>Mature_368_residues
MRKGGVRSTVEAENTLVFELRRGAITNNGATPWWVSATVGTSTVPQTFKFMMDTGTTNTWVTAKSCSTSECTQHDSFDET
ASSTFVWQDQSLTPIDFSGWGNMDVNLGNDVWVLSDKNAIDQDVTVDFWLSQSYSGARFGELIQDGFIACGPYGDNSRSN
LIFDALWYSGALASPWMSYWVDYTIDGAAVDSGEMIFGGSNADKYDPDTVISLDIVPGIWTHMGDSIVVDGAEIFTSPAL
LIDTGASEIKGEQAEIDKLIAAVTLDGQLPLSPDNPDHYAYPDLVFNLGKTSDGSTGQLVFPPRAYFNYIEAGTDQGKWQ
IAMTVLEDLGENSLIFGRNLLDRLYSEWEYDTSGTSVAGKTIRLAQRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4506475, Length=279, Percent_Identity=26.5232974910394, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI119372298, Length=284, Percent_Identity=29.2253521126761, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI23943854, Length=285, Percent_Identity=29.1228070175439, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI119372302, Length=284, Percent_Identity=29.2253521126761, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI4503145, Length=262, Percent_Identity=27.0992366412214, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28573989, Length=321, Percent_Identity=26.791277258567, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI20129385, Length=343, Percent_Identity=26.2390670553936, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19921120, Length=301, Percent_Identity=26.2458471760797, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40230; Mature: 40230

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGGVRSTVEAENTLVFELRRGAITNNGATPWWVSATVGTSTVPQTFKFMMDTGTTNTW
CCCCCCCCEECCCCEEEEEEECCEEECCCCCCEEEEEECCCCCCHHHHHHEEECCCCCEE
VTAKSCSTSECTQHDSFDETASSTFVWQDQSLTPIDFSGWGNMDVNLGNDVWVLSDKNAI
EEECCCCCCHHCCCCCCCHHCCCEEEECCCCCCCEEECCCCCEEEECCCEEEEEECCCCC
DQDVTVDFWLSQSYSGARFGELIQDGFIACGPYGDNSRSNLIFDALWYSGALASPWMSYW
CCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEHHHCCCCCCCHHHHE
VDYTIDGAAVDSGEMIFGGSNADKYDPDTVISLDIVPGIWTHMGDSIVVDGAEIFTSPAL
EEEEECCEEECCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCCEEEEECHHHHCCCEE
LIDTGASEIKGEQAEIDKLIAAVTLDGQLPLSPDNPDHYAYPDLVFNLGKTSDGSTGQLV
EEECCHHHHCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCEEE
FPPRAYFNYIEAGTDQGKWQIAMTVLEDLGENSLIFGRNLLDRLYSEWEYDTSGTSVAGK
ECCHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCC
TIRLAQRV
EEEEECCC
>Mature Secondary Structure
MRKGGVRSTVEAENTLVFELRRGAITNNGATPWWVSATVGTSTVPQTFKFMMDTGTTNTW
CCCCCCCCEECCCCEEEEEEECCEEECCCCCCEEEEEECCCCCCHHHHHHEEECCCCCEE
VTAKSCSTSECTQHDSFDETASSTFVWQDQSLTPIDFSGWGNMDVNLGNDVWVLSDKNAI
EEECCCCCCHHCCCCCCCHHCCCEEEECCCCCCCEEECCCCCEEEECCCEEEEEECCCCC
DQDVTVDFWLSQSYSGARFGELIQDGFIACGPYGDNSRSNLIFDALWYSGALASPWMSYW
CCCCEEEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEHHHCCCCCCCHHHHE
VDYTIDGAAVDSGEMIFGGSNADKYDPDTVISLDIVPGIWTHMGDSIVVDGAEIFTSPAL
EEEEECCEEECCCCEEEECCCCCCCCCCCEEEEECCCCHHHHCCCEEEEECHHHHCCCEE
LIDTGASEIKGEQAEIDKLIAAVTLDGQLPLSPDNPDHYAYPDLVFNLGKTSDGSTGQLV
EEECCHHHHCCCHHHHHHEEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCEEE
FPPRAYFNYIEAGTDQGKWQIAMTVLEDLGENSLIFGRNLLDRLYSEWEYDTSGTSVAGK
ECCHHHHHHHHCCCCCCCEEEHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCC
TIRLAQRV
EEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA