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The map label for this gene is amaB [H]

Identifier: 150397566

GI number: 150397566

Start: 2444076

End: 2445326

Strand: Direct

Name: amaB [H]

Synonym: Smed_2366

Alternate gene names: 150397566

Gene position: 2444076-2445326 (Clockwise)

Preceding gene: 150397564

Following gene: 150397567

Centisome position: 64.63

GC content: 64.03

Gene sequence:

>1251_bases
ATGGCAGCACCTGGCGAGAATAGGCGCGTCAATGCCGATCGCCTGTGGGATTCGTTGATGGAAATGGCGAAGATCGGCCC
CGGCGTTGCCGGCGGCAATAACCGCCAGACCTTGACGGATGCGGACGGTGAAGGCCGCCGGCTTTTCCAGTCCTGGTGCG
AAAAGGCGGGGCTCTCCATGGGTGTCGACAAGATGGGCACCATGTACATGACCCGCCCGGGTACCGATTCGGATGCGCTG
CCCGTCCATATCGGCTCTCACCTCGACACGCAGCCGACGGGCGGCAAGTTCGACGGTGTGCTCGGCGTTCTGAGCGGTCT
CGAAGTCGTACGCACGATGGACGACCTCGGGATCAGGACGAAGCACCCGGTCGTCGTGACCAACTGGACCAACGAGGAAG
GCGCCCGCTTCGCGCCTGCCATGCTCGCCTCCGGCGTCTTTGCCGGCGTCCACACGCTTGATTACGCCTATGCCCGAAAG
GACCCGGAAGGGAAGAGCTTCGGCGACGAATTGAAGCGCATCGGCTGGTCCGGCGACGAAGAGGTGGGCGCGCGCAAGAT
GCACGCCTATTTCGAATACCACATCGAACAAGGCCCGATTCTCGAGGCCGAGAACAGGCAGATCGGCGTCGTCACACACT
GCCAGGGCCTCTGGTGGCTGGAGTTCACGCTGACGGGCAAGGAGGCGCATACGGGCTCGACGCCGATGGAGATGCGCGTC
AATGCGGGCCTTGCCATGGCGCGCATTCTCGAAATGGTTCAGACCGTCGCGATGGAAAACCAGCCGGGCGCTGTCGGCGG
TGTCGGCCAGATGTTCTTTTCGCCAAATTCCCGCAACGTGCTGCCCGGCAAAGTGGTGTTCACGGTCGATATCCGCTCGC
CCGACCAGACCAAGCTCGACCGCATGCGGGCCCGGATCGAAGCCGAAGCGCCCAAAATCTGCGAGCGGCTCGGGGTTGGC
TGTTCGATCGAGGCGGTCGGGCACTTCGATCCCGTCACCTTCGATCCGAAGCTGGTCGAAACCGTGCGCGGCGCCGCCGA
GAAGCTCGGCTACAGCCACATGAACCTCGTCTCGGGCGCGGGCCACGATGCCTGCTGGGCCGCGAAGGTCGCGCCGACCA
CCATGATCATGTGCCCCTGCGTCGATGGGCTCAGTCATAACGAGGCGGAGGACATCTCCAAGGATTGGGCGGCCGCCGGC
GCGGACGTCCTCTTTCATGCCGTCCTCGAGACGGCGGAAGTCGTGGAATGA

Upstream 100 bases:

>100_bases
CGCCCGATCGAAGGGCATACAAACAAGCTCGCGATTTGGCCGAAGGGAACAAGAGGGCTATCCCCCGGGGAGGGACCGGC
CGGCAAAAGAGGAGAACGCC

Downstream 100 bases:

>100_bases
GTTTTGCGGGCGGAACGGTGGTTCCGCCCTTTTTACTGCATGCTCCTTTGATCGTAGCCGGCCAATGGACAAAGCATGCA
GCAATTCAAAGGATGCAGCG

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MAAPGENRRVNADRLWDSLMEMAKIGPGVAGGNNRQTLTDADGEGRRLFQSWCEKAGLSMGVDKMGTMYMTRPGTDSDAL
PVHIGSHLDTQPTGGKFDGVLGVLSGLEVVRTMDDLGIRTKHPVVVTNWTNEEGARFAPAMLASGVFAGVHTLDYAYARK
DPEGKSFGDELKRIGWSGDEEVGARKMHAYFEYHIEQGPILEAENRQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMEMRV
NAGLAMARILEMVQTVAMENQPGAVGGVGQMFFSPNSRNVLPGKVVFTVDIRSPDQTKLDRMRARIEAEAPKICERLGVG
CSIEAVGHFDPVTFDPKLVETVRGAAEKLGYSHMNLVSGAGHDACWAAKVAPTTMIMCPCVDGLSHNEAEDISKDWAAAG
ADVLFHAVLETAEVVE

Sequences:

>Translated_416_residues
MAAPGENRRVNADRLWDSLMEMAKIGPGVAGGNNRQTLTDADGEGRRLFQSWCEKAGLSMGVDKMGTMYMTRPGTDSDAL
PVHIGSHLDTQPTGGKFDGVLGVLSGLEVVRTMDDLGIRTKHPVVVTNWTNEEGARFAPAMLASGVFAGVHTLDYAYARK
DPEGKSFGDELKRIGWSGDEEVGARKMHAYFEYHIEQGPILEAENRQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMEMRV
NAGLAMARILEMVQTVAMENQPGAVGGVGQMFFSPNSRNVLPGKVVFTVDIRSPDQTKLDRMRARIEAEAPKICERLGVG
CSIEAVGHFDPVTFDPKLVETVRGAAEKLGYSHMNLVSGAGHDACWAAKVAPTTMIMCPCVDGLSHNEAEDISKDWAAAG
ADVLFHAVLETAEVVE
>Mature_415_residues
AAPGENRRVNADRLWDSLMEMAKIGPGVAGGNNRQTLTDADGEGRRLFQSWCEKAGLSMGVDKMGTMYMTRPGTDSDALP
VHIGSHLDTQPTGGKFDGVLGVLSGLEVVRTMDDLGIRTKHPVVVTNWTNEEGARFAPAMLASGVFAGVHTLDYAYARKD
PEGKSFGDELKRIGWSGDEEVGARKMHAYFEYHIEQGPILEAENRQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMEMRVN
AGLAMARILEMVQTVAMENQPGAVGGVGQMFFSPNSRNVLPGKVVFTVDIRSPDQTKLDRMRARIEAEAPKICERLGVGC
SIEAVGHFDPVTFDPKLVETVRGAAEKLGYSHMNLVSGAGHDACWAAKVAPTTMIMCPCVDGLSHNEAEDISKDWAAAGA
DVLFHAVLETAEVVE

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=393, Percent_Identity=31.2977099236641, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 45029; Mature: 44898

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAPGENRRVNADRLWDSLMEMAKIGPGVAGGNNRQTLTDADGEGRRLFQSWCEKAGLSM
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCC
GVDKMGTMYMTRPGTDSDALPVHIGSHLDTQPTGGKFDGVLGVLSGLEVVRTMDDLGIRT
CHHHHCCEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KHPVVVTNWTNEEGARFAPAMLASGVFAGVHTLDYAYARKDPEGKSFGDELKRIGWSGDE
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCH
EVGARKMHAYFEYHIEQGPILEAENRQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMEMRV
HHHHHHHHHHHHEECCCCCEEECCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEE
NAGLAMARILEMVQTVAMENQPGAVGGVGQMFFSPNSRNVLPGKVVFTVDIRSPDQTKLD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCCCCEEEEEEECCCCCHHHHH
RMRARIEAEAPKICERLGVGCSIEAVGHFDPVTFDPKLVETVRGAAEKLGYSHMNLVSGA
HHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCC
GHDACWAAKVAPTTMIMCPCVDGLSHNEAEDISKDWAAAGADVLFHAVLETAEVVE
CCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AAPGENRRVNADRLWDSLMEMAKIGPGVAGGNNRQTLTDADGEGRRLFQSWCEKAGLSM
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCCCC
GVDKMGTMYMTRPGTDSDALPVHIGSHLDTQPTGGKFDGVLGVLSGLEVVRTMDDLGIRT
CHHHHCCEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
KHPVVVTNWTNEEGARFAPAMLASGVFAGVHTLDYAYARKDPEGKSFGDELKRIGWSGDE
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCH
EVGARKMHAYFEYHIEQGPILEAENRQIGVVTHCQGLWWLEFTLTGKEAHTGSTPMEMRV
HHHHHHHHHHHHEECCCCCEEECCCCEEEEEEECCCEEEEEEEEECCCCCCCCCCEEEEE
NAGLAMARILEMVQTVAMENQPGAVGGVGQMFFSPNSRNVLPGKVVFTVDIRSPDQTKLD
CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHEECCCCCCCCCCEEEEEEECCCCCHHHHH
RMRARIEAEAPKICERLGVGCSIEAVGHFDPVTFDPKLVETVRGAAEKLGYSHMNLVSGA
HHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCC
GHDACWAAKVAPTTMIMCPCVDGLSHNEAEDISKDWAAAGADVLFHAVLETAEVVE
CCCCEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]