| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cyaA [H]
Identifier: 150397564
GI number: 150397564
Start: 2441307
End: 2442983
Strand: Direct
Name: cyaA [H]
Synonym: Smed_2364
Alternate gene names: 150397564
Gene position: 2441307-2442983 (Clockwise)
Preceding gene: 150397563
Following gene: 150397566
Centisome position: 64.55
GC content: 63.98
Gene sequence:
>1677_bases TTGACGATACTCTCCGCCAGCACGCGCAAGAAGATGCACCTGATCTCCGGGGCTGTGCTCGGCATATTCGTGCTCTGTCA CTTCTCAAATCATGCGCTTGGACTCGTCTCGATCGGCGCGATGGAAGTGGGGCGGCGGATTTTTACCTCAGTCTGGCACA GCGTACCGGGTACCGTCGTGCTTTACGGAGCGCTGCTCCTGCATTTCCTTATGGCGCTCGACAGCCTCTATAGGCGGCAG ACATTCAGAATGCCTGCCGGAGAAGCCCTGAAGATCGTCTTTGGCCTGAGCCTGCCGTTTCTGCTCGTCCCTCACGTGGT CGCCACCCGCGTGGAGCCGCTCCTTACGGGCATTTACCCGGATTATGCTGGAATTCTGCGAACCCTGTGGTCAAGCTCGA TCAACGCCTCCCGGCAGTCGCTGGCGCTGATCGTCGTCTGGGGCCATGCCTGTCTTGGCGCCTGGTTCTGGATGCGCGGC CGCGCATGGTTTCCGCGATATGAGACCCTGCTCTATACCGTCGCGCTTCTGGTGCCGATCTTTGCGCTTCTCGGCTTCGT GAACGGCGCGCGTTCGCTCGAGCGGGACTATGCCGAACATGGAGGTTACGGCGACCGTGCCTATGCCGGCGCGTCGCAGG AAAGGGCCGATCCCGCTGTGCTCGAAAGCATCCGGCTCGCATTTTACGGCGGCTTCGCAGCCCTCATCGGCGCAACGCTC GCGCTGCGCGCCATGCCTGCGCGTGGCCGCATCCGCATCCGTTATCCGGACGGGCGGGTCGCTGCCGTCAGCCTCGGCTT CAGCGTGCTCGAGGCGAGCCGGGCAGCCGGCATTCCGCATGTTTCGGTCTGCGGCGGACGCGGCCGCTGCTCGACCTGCC GCGTCCGGATCACCCAGGGGCTCGAGAATCAGCCCGCACCTGAAGCAGCGGAGCTCGCGACGCTGACCCGCATCGGCGCG CCCGAAAACATACGCCTCGCCTGTCAGTTCCGGCCCGTTCACAATGTGAGCGTCGTACCGATCCTCAATACCGATAGTAT TGGGGTCAAGACGCAGATCGCCCGCCAGAATGCCGGCGGCCGCGAGCGCCGCGTGGCGGTGCTCTTTTGCGACCTGCGCG ACTTCACCCGAATTGCCGAGCACAGGCTGCCCTACGACACCGTCTTCCTGCTCAACCGCTACTTCGAAGTCGTCGGCGAA GCCGTCGAAGGTTCGGGCGGCGTAATCGACAAGTTCATCGGCGACGGGGCACTCGCGATCTTTGGTCTGAAGACCCCCTT GCCGGAAGCCTGCCGGCAGGCACTTTCGGCCGCTGCCCGATTGTCGCAGGGCATCCGCGCGCTGAACCAGACATTCGAAG GGGAGCTCGACCAGCCACTGAGGCTCGCCATCGGCCTGCATGCGGGCCCGGCGATCATCGGCGAAATGGGATACGGTCAG GCAACGTCGCTCACCGCCGTCGGCGACACCATCAACACCGCGAGCCGCCTGGAAGGCCTTGCAAAAGAGCACGACGCCGA GCTTGCGGTTTCCGCCGAACTGGTCCAGCGCGCCGGTCTTGCCTTTGAAGGCCATAGACGCCTAGAAATCAGTCTGCGCG GCCGCCAGGCGACGCTGGAAACCTGGATAGTGGGTGACGCGTCACAGCTCTCGCTTTCGCTACCGTCACCGAGCTGA
Upstream 100 bases:
>100_bases AGTTTGTACAAAAAACGTAAGTTGCCGGCACCAGTGATCTGGTTGATAAGGAAGATACCGAAGCGGGCCGCTCCGCGGTC GCCAGAGCCAGGCAAATTAT
Downstream 100 bases:
>100_bases CCGGCCTCTCATCCGCCTGCCGGCACCTTCTCGCCGCAAGCGGGGCAAAGGGATATGCCGCGCCGTCCAACTCCCTCTAC AGAGATGAAGGCCGTCCGCG
Product: putative adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MTILSASTRKKMHLISGAVLGIFVLCHFSNHALGLVSIGAMEVGRRIFTSVWHSVPGTVVLYGALLLHFLMALDSLYRRQ TFRMPAGEALKIVFGLSLPFLLVPHVVATRVEPLLTGIYPDYAGILRTLWSSSINASRQSLALIVVWGHACLGAWFWMRG RAWFPRYETLLYTVALLVPIFALLGFVNGARSLERDYAEHGGYGDRAYAGASQERADPAVLESIRLAFYGGFAALIGATL ALRAMPARGRIRIRYPDGRVAAVSLGFSVLEASRAAGIPHVSVCGGRGRCSTCRVRITQGLENQPAPEAAELATLTRIGA PENIRLACQFRPVHNVSVVPILNTDSIGVKTQIARQNAGGRERRVAVLFCDLRDFTRIAEHRLPYDTVFLLNRYFEVVGE AVEGSGGVIDKFIGDGALAIFGLKTPLPEACRQALSAAARLSQGIRALNQTFEGELDQPLRLAIGLHAGPAIIGEMGYGQ ATSLTAVGDTINTASRLEGLAKEHDAELAVSAELVQRAGLAFEGHRRLEISLRGRQATLETWIVGDASQLSLSLPSPS
Sequences:
>Translated_558_residues MTILSASTRKKMHLISGAVLGIFVLCHFSNHALGLVSIGAMEVGRRIFTSVWHSVPGTVVLYGALLLHFLMALDSLYRRQ TFRMPAGEALKIVFGLSLPFLLVPHVVATRVEPLLTGIYPDYAGILRTLWSSSINASRQSLALIVVWGHACLGAWFWMRG RAWFPRYETLLYTVALLVPIFALLGFVNGARSLERDYAEHGGYGDRAYAGASQERADPAVLESIRLAFYGGFAALIGATL ALRAMPARGRIRIRYPDGRVAAVSLGFSVLEASRAAGIPHVSVCGGRGRCSTCRVRITQGLENQPAPEAAELATLTRIGA PENIRLACQFRPVHNVSVVPILNTDSIGVKTQIARQNAGGRERRVAVLFCDLRDFTRIAEHRLPYDTVFLLNRYFEVVGE AVEGSGGVIDKFIGDGALAIFGLKTPLPEACRQALSAAARLSQGIRALNQTFEGELDQPLRLAIGLHAGPAIIGEMGYGQ ATSLTAVGDTINTASRLEGLAKEHDAELAVSAELVQRAGLAFEGHRRLEISLRGRQATLETWIVGDASQLSLSLPSPS >Mature_557_residues TILSASTRKKMHLISGAVLGIFVLCHFSNHALGLVSIGAMEVGRRIFTSVWHSVPGTVVLYGALLLHFLMALDSLYRRQT FRMPAGEALKIVFGLSLPFLLVPHVVATRVEPLLTGIYPDYAGILRTLWSSSINASRQSLALIVVWGHACLGAWFWMRGR AWFPRYETLLYTVALLVPIFALLGFVNGARSLERDYAEHGGYGDRAYAGASQERADPAVLESIRLAFYGGFAALIGATLA LRAMPARGRIRIRYPDGRVAAVSLGFSVLEASRAAGIPHVSVCGGRGRCSTCRVRITQGLENQPAPEAAELATLTRIGAP ENIRLACQFRPVHNVSVVPILNTDSIGVKTQIARQNAGGRERRVAVLFCDLRDFTRIAEHRLPYDTVFLLNRYFEVVGEA VEGSGGVIDKFIGDGALAIFGLKTPLPEACRQALSAAARLSQGIRALNQTFEGELDQPLRLAIGLHAGPAIIGEMGYGQA TSLTAVGDTINTASRLEGLAKEHDAELAVSAELVQRAGLAFEGHRRLEISLRGRQATLETWIVGDASQLSLSLPSPS
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI17534655, Length=195, Percent_Identity=30.2564102564103, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161078020, Length=196, Percent_Identity=30.1020408163265, Blast_Score=69, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 60299; Mature: 60167
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: PS50125 GUANYLATE_CYCLASES_2 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILSASTRKKMHLISGAVLGIFVLCHFSNHALGLVSIGAMEVGRRIFTSVWHSVPGTVV CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHH LYGALLLHFLMALDSLYRRQTFRMPAGEALKIVFGLSLPFLLVPHVVATRVEPLLTGIYP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC DYAGILRTLWSSSINASRQSLALIVVWGHACLGAWFWMRGRAWFPRYETLLYTVALLVPI HHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FALLGFVNGARSLERDYAEHGGYGDRAYAGASQERADPAVLESIRLAFYGGFAALIGATL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALRAMPARGRIRIRYPDGRVAAVSLGFSVLEASRAAGIPHVSVCGGRGRCSTCRVRITQG HHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECC LENQPAPEAAELATLTRIGAPENIRLACQFRPVHNVSVVPILNTDSIGVKTQIARQNAGG CCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCC RERRVAVLFCDLRDFTRIAEHRLPYDTVFLLNRYFEVVGEAVEGSGGVIDKFIGDGALAI CCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEE FGLKTPLPEACRQALSAAARLSQGIRALNQTFEGELDQPLRLAIGLHAGPAIIGEMGYGQ EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHEECCCCCC ATSLTAVGDTINTASRLEGLAKEHDAELAVSAELVQRAGLAFEGHRRLEISLRGRQATLE CCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCEEEEEEECCCEEEEE TWIVGDASQLSLSLPSPS EEEECCHHHEEEECCCCC >Mature Secondary Structure TILSASTRKKMHLISGAVLGIFVLCHFSNHALGLVSIGAMEVGRRIFTSVWHSVPGTVV CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHH LYGALLLHFLMALDSLYRRQTFRMPAGEALKIVFGLSLPFLLVPHVVATRVEPLLTGIYP HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC DYAGILRTLWSSSINASRQSLALIVVWGHACLGAWFWMRGRAWFPRYETLLYTVALLVPI HHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FALLGFVNGARSLERDYAEHGGYGDRAYAGASQERADPAVLESIRLAFYGGFAALIGATL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ALRAMPARGRIRIRYPDGRVAAVSLGFSVLEASRAAGIPHVSVCGGRGRCSTCRVRITQG HHHCCCCCCEEEEECCCCCEEEEEHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEEECC LENQPAPEAAELATLTRIGAPENIRLACQFRPVHNVSVVPILNTDSIGVKTQIARQNAGG CCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCC RERRVAVLFCDLRDFTRIAEHRLPYDTVFLLNRYFEVVGEAVEGSGGVIDKFIGDGALAI CCCEEEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEE FGLKTPLPEACRQALSAAARLSQGIRALNQTFEGELDQPLRLAIGLHAGPAIIGEMGYGQ EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHEECCCCCC ATSLTAVGDTINTASRLEGLAKEHDAELAVSAELVQRAGLAFEGHRRLEISLRGRQATLE CCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEECCCEEEEEEECCCEEEEE TWIVGDASQLSLSLPSPS EEEECCHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]