| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is dht [H]
Identifier: 150397567
GI number: 150397567
Start: 2445501
End: 2446955
Strand: Direct
Name: dht [H]
Synonym: Smed_2367
Alternate gene names: 150397567
Gene position: 2445501-2446955 (Clockwise)
Preceding gene: 150397566
Following gene: 150397569
Centisome position: 64.66
GC content: 62.82
Gene sequence:
>1455_bases ATGAGCACTGTCATAAAGGGTGGAACCATCGTTACGGCCGACCTGACCTACAGGGCCGACGTGAAGATCGAGGGCGGCAG GATCGTCGGGATCGGGCCGAACCTATCGGCTGCCGAGACACTGGACGCTACCGGCTGCTACGTCATGCCGGGCGGCATCG ATCCGCACACCCATCTCGAAATGCCCTTCATGGGCACCTATTCCTCGGACGATTTCGAAAGCGGGACGCGGGCAGCGCTT GCCGGCGGCACGACGATGGTCGTCGACTTCGCCCTCCCCTCGCCCGGTCAGTCGCTGCTCGAAGCGCTCACGATGTGGGA CAACAAGTCGACGCGCGCCAATTGCGACTATTCCTTCCACATGGCGATCACCTGGTGGAGCGAGCAGGTCTTCAACGAGA TGGAGTCCGTCGTCAAAGAGAAGGGCATCAACACCTTCAAGCACTTCATGGCTTATAAAGGCGCTCTGATGGTGGACGAT GACGAGATGTTTTCCTCATTCCAGCGCTGCGCGGCACTTGGCGCCCTGCCGCTGGTTCACGCCGAGAACGGCGACGTGGT TGCGCAGTTGCAGGCGAAGCTGCTGGCGGAAGGAAATTCCGGTCCCGAGGCGCATGCCTATTCGCGGCCGGCAGAAGTCG AGGGCGAGGCCACCAACCGGGCGATCATGATCGCCGACATGGCCGGCTGTCCCGTCTACATCGTGCACACCTCCTGCGAA CAGTCGCATGAGGCCATCCGGCGCGCCCGCGCCAAGGGCATGCGCGTCTTCGGCGAGCCCTTGATCCAGCACCTGACCCT CGACGAGACGGAGTATTTCGACAAGGACTGGGACCACGCCGCACGTCGGGTGATGTCACCGCCCTTCCGCAACAAGCTGC ATCAGGACAGCCTCTGGGCGGGCCTCGCCTCCGGTTCGCTGCAGGTGGTCGCGACCGATCATTGCGCCTTCACGACCGAG CAGAAACGCTTCGGCGTCGGCGATTTCACCAGGATCCCGAACGGCACCGGCGGCCTGGAGGATCGCATGCCGATGCTCTG GACCCATGGCGTCGCGACTGGCCGCATCACCATGAACGAATTCGTGGCGGTCACCTCGACCAACATCGCCAAGATCCTCA ACATCTATCCGAAGAAGGGTGCAATCCTCGTCGGCGCCGATGCCGACATCGTCGTGTGGGACCCGAAGCGGTCGAAGACG ATCTCTGCGAAGACGCAGCAATCGGCGATCGACTACAACGTCTTCGAAGGCAAGACCGTTACCGGTCTTCCGCGCTTCAC GCTGTCGCGTGGCGTGGTTTCTATCGAGGAGGGTTCGGTCAAGACACAGGAAGGCCACGGCGAATTCGTGCGGCGCGACC CCTTCCCCGCTGTCAGCACCGCGCTTTCGACCTGGAAGGAAGTGACGGCACCTCGCGCAGTACAGCGCAGCGGCATCCCC GCAAGCGGCGTCTGA
Upstream 100 bases:
>100_bases CATGCAGCAATTCAAAGGATGCAGCGCCTTTGCACGTCTGAGACATGCGGCGCTGCAGGCGGCTCAGCCGCCGAAAGCAT CATCCAGAGGAACATAATCC
Downstream 100 bases:
>100_bases ACCGAGATGCCGCACCCCTATGCCATCAGACAAAAATACGTCGGCGACCCGTCAGGCGGGCACCAGCTCGTCAAGTTCCG GCAACAGCACGACGCTCTCG
Product: phenylhydantoinase
Products: NA
Alternate protein names: DHPase [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MSTVIKGGTIVTADLTYRADVKIEGGRIVGIGPNLSAAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAAL AGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWSEQVFNEMESVVKEKGINTFKHFMAYKGALMVDD DEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE QSHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTE QKRFGVGDFTRIPNGTGGLEDRMPMLWTHGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKT ISAKTQQSAIDYNVFEGKTVTGLPRFTLSRGVVSIEEGSVKTQEGHGEFVRRDPFPAVSTALSTWKEVTAPRAVQRSGIP ASGV
Sequences:
>Translated_484_residues MSTVIKGGTIVTADLTYRADVKIEGGRIVGIGPNLSAAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAAL AGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWSEQVFNEMESVVKEKGINTFKHFMAYKGALMVDD DEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE QSHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTE QKRFGVGDFTRIPNGTGGLEDRMPMLWTHGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKT ISAKTQQSAIDYNVFEGKTVTGLPRFTLSRGVVSIEEGSVKTQEGHGEFVRRDPFPAVSTALSTWKEVTAPRAVQRSGIP ASGV >Mature_483_residues STVIKGGTIVTADLTYRADVKIEGGRIVGIGPNLSAAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFESGTRAALA GGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAITWWSEQVFNEMESVVKEKGINTFKHFMAYKGALMVDDD EMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCEQ SHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQ KRFGVGDFTRIPNGTGGLEDRMPMLWTHGVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKTI SAKTQQSAIDYNVFEGKTVTGLPRFTLSRGVVSIEEGSVKTQEGHGEFVRRDPFPAVSTALSTWKEVTAPRAVQRSGIPA SGV
Specific function: Catalyzes the hydrolysis of dihydropyrimidines and of the structurally related DL-5-mono-substituted hydantoins, to produce N-carbamoyl-D-amino acids [H]
COG id: COG0044
COG function: function code F; Dihydroorotase and related cyclic amidohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHOase family. Hydantoinase/dihydropyrimidinase subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503375, Length=461, Percent_Identity=49.2407809110629, Blast_Score=463, Evalue=1e-130, Organism=Homo sapiens, GI4503051, Length=458, Percent_Identity=46.5065502183406, Blast_Score=427, Evalue=1e-120, Organism=Homo sapiens, GI190194363, Length=458, Percent_Identity=47.3799126637555, Blast_Score=427, Evalue=1e-119, Organism=Homo sapiens, GI62422571, Length=458, Percent_Identity=46.5065502183406, Blast_Score=426, Evalue=1e-119, Organism=Homo sapiens, GI4503377, Length=483, Percent_Identity=44.3064182194617, Blast_Score=424, Evalue=1e-118, Organism=Homo sapiens, GI4503379, Length=460, Percent_Identity=45.6521739130435, Blast_Score=423, Evalue=1e-118, Organism=Homo sapiens, GI19923821, Length=480, Percent_Identity=43.75, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI18105007, Length=439, Percent_Identity=25.5125284738041, Blast_Score=96, Evalue=8e-20, Organism=Escherichia coli, GI87082175, Length=462, Percent_Identity=40.2597402597403, Blast_Score=329, Evalue=2e-91, Organism=Escherichia coli, GI1786722, Length=447, Percent_Identity=28.1879194630872, Blast_Score=167, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17539558, Length=483, Percent_Identity=47.4120082815735, Blast_Score=442, Evalue=1e-124, Organism=Caenorhabditis elegans, GI71989490, Length=484, Percent_Identity=45.0413223140496, Blast_Score=427, Evalue=1e-120, Organism=Caenorhabditis elegans, GI86575075, Length=456, Percent_Identity=33.7719298245614, Blast_Score=247, Evalue=9e-66, Organism=Caenorhabditis elegans, GI193204318, Length=438, Percent_Identity=23.5159817351598, Blast_Score=84, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6322218, Length=406, Percent_Identity=26.1083743842365, Blast_Score=114, Evalue=2e-26, Organism=Drosophila melanogaster, GI221377917, Length=463, Percent_Identity=46.0043196544276, Blast_Score=421, Evalue=1e-118, Organism=Drosophila melanogaster, GI17137462, Length=461, Percent_Identity=45.119305856833, Blast_Score=409, Evalue=1e-114, Organism=Drosophila melanogaster, GI24644287, Length=294, Percent_Identity=44.2176870748299, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24644289, Length=258, Percent_Identity=44.5736434108527, Blast_Score=228, Evalue=8e-60, Organism=Drosophila melanogaster, GI24642586, Length=419, Percent_Identity=28.4009546539379, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI18859883, Length=424, Percent_Identity=21.4622641509434, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011778 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.2.2 [H]
Molecular weight: Translated: 52602; Mature: 52471
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTVIKGGTIVTADLTYRADVKIEGGRIVGIGPNLSAAETLDATGCYVMPGGIDPHTHLE CCCEECCCEEEEEEEEEEEEEEECCCEEEEECCCCCHHHHCCCCCCEEECCCCCCCCEEC MPFMGTYSSDDFESGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFH CCEECCCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEE MAITWWSEQVFNEMESVVKEKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVH EEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEE AENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE CCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCH QSHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWA HHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHHHCCHHHHHH GLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTHGVATGRITMNE HHCCCCEEEEEECCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEECEEEHHH FVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKTISAKTQQSAIDYNVFEGKTV EEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECCCCCCEEECHHHHHCCCEEEECCCEE TGLPRFTLSRGVVSIEEGSVKTQEGHGEFVRRDPFPAVSTALSTWKEVTAPRAVQRSGIP CCCCCHHHHCCEEEEECCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHCCCC ASGV CCCC >Mature Secondary Structure STVIKGGTIVTADLTYRADVKIEGGRIVGIGPNLSAAETLDATGCYVMPGGIDPHTHLE CCEECCCEEEEEEEEEEEEEEECCCEEEEECCCCCHHHHCCCCCCEEECCCCCCCCEEC MPFMGTYSSDDFESGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFH CCEECCCCCCCCCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEE MAITWWSEQVFNEMESVVKEKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVH EEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCEEEE AENGDVVAQLQAKLLAEGNSGPEAHAYSRPAEVEGEATNRAIMIADMAGCPVYIVHTSCE CCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCH QSHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWA HHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHHHCCHHHHHH GLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLWTHGVATGRITMNE HHCCCCEEEEEECCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCEECEEEHHH FVAVTSTNIAKILNIYPKKGAILVGADADIVVWDPKRSKTISAKTQQSAIDYNVFEGKTV EEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECCCCCCEEECHHHHHCCCEEEECCCEE TGLPRFTLSRGVVSIEEGSVKTQEGHGEFVRRDPFPAVSTALSTWKEVTAPRAVQRSGIP CCCCCHHHHCCEEEEECCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHCCHHHHHCCCC ASGV CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]