| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is cpxA [H]
Identifier: 150397446
GI number: 150397446
Start: 2323543
End: 2324961
Strand: Direct
Name: cpxA [H]
Synonym: Smed_2246
Alternate gene names: 150397446
Gene position: 2323543-2324961 (Clockwise)
Preceding gene: 150397445
Following gene: 150397452
Centisome position: 61.44
GC content: 61.52
Gene sequence:
>1419_bases ATGATGAGCTCAGAATCAAGGACCGGATCAAGGGGCATGGCAAGCTTTGACGGTTTGAAGCGCGAAGGATCGGCACCGAC GGAGGGTGCCTGGAAGCGCCTCGTCCGATGGCTGCGGCGCCGGCTCCCGATGGGCCTTTACGCGCGTTCGCTGCTGATCG TCGTTATCCCGATGGTGCTGCTGCAGTCGGTGGTCGCCTTCGTGTTTATGGAGCGGCACTGGCAGCTTGTCACCCAACGC CTGTCTTCCGCGGTGACCAGCGACATCGCCGCCATCGTCGACCTGATAACGACGTTTCCGCGGGAGGGCGATATCGACCA GATCGTCCGCATCGCTCGCGATCAACTCGATCTGAACATAACCGTCGAACCGGGTGGCGAACTGCCGCCGCCGCGTCCCA AGCCCTTCTTCGAAATCCTTGACCAGATTCTCAGCGAGGAGATTTCAAGCCAGATCCGGCGCCCCTTCTGGATCGACACT GTCGGCAATTCGAAGATCGTGGAAATCCGCATCAAGCTTGAAGACGACCGTATTCTCAGGGTCTATGCCCGGCGCAACCA GGCCTATGCTTCCAACACGCACATCTTCCTCGTGTGGATGGTCGGCGCGTCGCTCGTCTTGCTGACGATTGCGATCCTCT TCCTGCGCGGTCAGATCCGGCCGATCCTTGCGCTGGCAAGCGCTGCCGAGAGCTTCGGTAAAGGTCAGAAGATCGACGAT TTCGCCCCGCGGGGCGCCGACGAAATCCGGCGCGCCGGTCTCGCCTTCATCCTGATGCGCGAACGGATTGAACGCCAGAT CGAACAGCGCACCGCGATGCTGACTGGCGTCAGCCACGATTTGAGGACGATTCTGACCCGCTTCAAGCTGCAGCTTGCAC TTGTCGGCAACAATCCGGACCTGGAGAGCCTCAATCAGGACGTGGAGGACATGCAGAACATGCTGGAAGGCTATCTCGCC TTCGCTCGAGGAGAGGCGGAAGAGGACGTCGGCCGGTTGAAGCTGAGCGAGCTGATGGCCCGGCTTGCGGCGGAGGCGGA GCTGTACGGCAAGATACTGACCACTGCCATTCAGGGCGAGGACGAAATCCACGTCAGGCCGAACGCCTTCACCCGGCTGA TCTCCAATCTCGCATCCAATGCGTATCGCTATGCGCGCACCGTGCATATCGAAGCGCGCCAGAGCGCGAAATGGTTGATC ATCACGGTCGATGACGATGGTCCCGGCATTCCGGAACGCTCGCGCGAAGACGTGTTCAAACCCTTTTTCCGCCTCGACGA AGCCCGCAATCTCGACAGCTCCGGCACCGGCCTCGGCCTTGCAGTCGCACGTGACATCGCCCGCAGCCATGGGGGCAACG TCACGCTCGCAGACAGCCCGCTTGGCGGCCTGCGCGCAACCGTGCGCGTCCCGACGTGA
Upstream 100 bases:
>100_bases TGCAGATAAACCGCCTGAGGCGCAAGATCGAGGACGATCCTTCCAACCCAGTCTGGCTGCAGACCGTTCGCGGAATCGGC TACCGGCTGAGCGTTGACTG
Downstream 100 bases:
>100_bases AATTCGGAAGCGATCACGTTCATGTTTTTAGGTCGATCCGACCTGAAACATCGTGATCTGGGAGCCCTCCCCCGCCGGAC TGGAGCGGCCGGTAGCGCAG
Product: integral membrane sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MMSSESRTGSRGMASFDGLKREGSAPTEGAWKRLVRWLRRRLPMGLYARSLLIVVIPMVLLQSVVAFVFMERHWQLVTQR LSSAVTSDIAAIVDLITTFPREGDIDQIVRIARDQLDLNITVEPGGELPPPRPKPFFEILDQILSEEISSQIRRPFWIDT VGNSKIVEIRIKLEDDRILRVYARRNQAYASNTHIFLVWMVGASLVLLTIAILFLRGQIRPILALASAAESFGKGQKIDD FAPRGADEIRRAGLAFILMRERIERQIEQRTAMLTGVSHDLRTILTRFKLQLALVGNNPDLESLNQDVEDMQNMLEGYLA FARGEAEEDVGRLKLSELMARLAAEAELYGKILTTAIQGEDEIHVRPNAFTRLISNLASNAYRYARTVHIEARQSAKWLI ITVDDDGPGIPERSREDVFKPFFRLDEARNLDSSGTGLGLAVARDIARSHGGNVTLADSPLGGLRATVRVPT
Sequences:
>Translated_472_residues MMSSESRTGSRGMASFDGLKREGSAPTEGAWKRLVRWLRRRLPMGLYARSLLIVVIPMVLLQSVVAFVFMERHWQLVTQR LSSAVTSDIAAIVDLITTFPREGDIDQIVRIARDQLDLNITVEPGGELPPPRPKPFFEILDQILSEEISSQIRRPFWIDT VGNSKIVEIRIKLEDDRILRVYARRNQAYASNTHIFLVWMVGASLVLLTIAILFLRGQIRPILALASAAESFGKGQKIDD FAPRGADEIRRAGLAFILMRERIERQIEQRTAMLTGVSHDLRTILTRFKLQLALVGNNPDLESLNQDVEDMQNMLEGYLA FARGEAEEDVGRLKLSELMARLAAEAELYGKILTTAIQGEDEIHVRPNAFTRLISNLASNAYRYARTVHIEARQSAKWLI ITVDDDGPGIPERSREDVFKPFFRLDEARNLDSSGTGLGLAVARDIARSHGGNVTLADSPLGGLRATVRVPT >Mature_472_residues MMSSESRTGSRGMASFDGLKREGSAPTEGAWKRLVRWLRRRLPMGLYARSLLIVVIPMVLLQSVVAFVFMERHWQLVTQR LSSAVTSDIAAIVDLITTFPREGDIDQIVRIARDQLDLNITVEPGGELPPPRPKPFFEILDQILSEEISSQIRRPFWIDT VGNSKIVEIRIKLEDDRILRVYARRNQAYASNTHIFLVWMVGASLVLLTIAILFLRGQIRPILALASAAESFGKGQKIDD FAPRGADEIRRAGLAFILMRERIERQIEQRTAMLTGVSHDLRTILTRFKLQLALVGNNPDLESLNQDVEDMQNMLEGYLA FARGEAEEDVGRLKLSELMARLAAEAELYGKILTTAIQGEDEIHVRPNAFTRLISNLASNAYRYARTVHIEARQSAKWLI ITVDDDGPGIPERSREDVFKPFFRLDEARNLDSSGTGLGLAVARDIARSHGGNVTLADSPLGGLRATVRVPT
Specific function: This protein is involved in several diverse cellular processes, such as the functioning of acetohydroxyacid synthetase I, in the biosynthesis of isoleucine and valine, the TraJ protein activation activity for tra gene expression in F plasmid, and the synt
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790346, Length=265, Percent_Identity=34.7169811320755, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1789808, Length=276, Percent_Identity=34.0579710144928, Blast_Score=137, Evalue=1e-33, Organism=Escherichia coli, GI1787894, Length=271, Percent_Identity=31.7343173431734, Blast_Score=121, Evalue=9e-29, Organism=Escherichia coli, GI1788393, Length=277, Percent_Identity=25.6317689530686, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI87082128, Length=273, Percent_Identity=25.6410256410256, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1787374, Length=102, Percent_Identity=42.156862745098, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1786912, Length=244, Percent_Identity=30.327868852459, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI145693157, Length=237, Percent_Identity=26.5822784810127, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1789149, Length=226, Percent_Identity=25.6637168141593, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1790861, Length=289, Percent_Identity=26.643598615917, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87081816, Length=232, Percent_Identity=25.4310344827586, Blast_Score=62, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 52863; Mature: 52863
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN ; PS50008 PIPLC_Y_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSSESRTGSRGMASFDGLKREGSAPTEGAWKRLVRWLRRRLPMGLYARSLLIVVIPMVL CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LQSVVAFVFMERHWQLVTQRLSSAVTSDIAAIVDLITTFPREGDIDQIVRIARDQLDLNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEE TVEPGGELPPPRPKPFFEILDQILSEEISSQIRRPFWIDTVGNSKIVEIRIKLEDDRILR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEECCCHHHH VYARRNQAYASNTHIFLVWMVGASLVLLTIAILFLRGQIRPILALASAAESFGKGQKIDD HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC FAPRGADEIRRAGLAFILMRERIERQIEQRTAMLTGVSHDLRTILTRFKLQLALVGNNPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCC LESLNQDVEDMQNMLEGYLAFARGEAEEDVGRLKLSELMARLAAEAELYGKILTTAIQGE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DEIHVRPNAFTRLISNLASNAYRYARTVHIEARQSAKWLIITVDDDGPGIPERSREDVFK CCEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHH PFFRLDEARNLDSSGTGLGLAVARDIARSHGGNVTLADSPLGGLRATVRVPT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCC >Mature Secondary Structure MMSSESRTGSRGMASFDGLKREGSAPTEGAWKRLVRWLRRRLPMGLYARSLLIVVIPMVL CCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LQSVVAFVFMERHWQLVTQRLSSAVTSDIAAIVDLITTFPREGDIDQIVRIARDQLDLNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEE TVEPGGELPPPRPKPFFEILDQILSEEISSQIRRPFWIDTVGNSKIVEIRIKLEDDRILR EECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEECCCHHHH VYARRNQAYASNTHIFLVWMVGASLVLLTIAILFLRGQIRPILALASAAESFGKGQKIDD HHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC FAPRGADEIRRAGLAFILMRERIERQIEQRTAMLTGVSHDLRTILTRFKLQLALVGNNPD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCCCC LESLNQDVEDMQNMLEGYLAFARGEAEEDVGRLKLSELMARLAAEAELYGKILTTAIQGE HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DEIHVRPNAFTRLISNLASNAYRYARTVHIEARQSAKWLIITVDDDGPGIPERSREDVFK CCEEECCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHH PFFRLDEARNLDSSGTGLGLAVARDIARSHGGNVTLADSPLGGLRATVRVPT HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]