| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is lgt [H]
Identifier: 150397452
GI number: 150397452
Start: 2328999
End: 2329841
Strand: Direct
Name: lgt [H]
Synonym: Smed_2252
Alternate gene names: 150397452
Gene position: 2328999-2329841 (Clockwise)
Preceding gene: 150397446
Following gene: 150397453
Centisome position: 61.58
GC content: 62.87
Gene sequence:
>843_bases TTGGAAACCATCGCGACCCGCCTCGCCATTCTCCCCTTCCCCGAAATCGACCCCGTGATCTTCACGATCGGGCCGCTCGC GGTGCGCTGGTACGGCCTCGCCTATGTAGTGGGTATCCTCCTCGGGTGGTTCTATGCGCGCCGCATCGTCCAGAACGCCG CCCTCTGGCGCAACGGAACCCCCGCCTGCAACCTGACGCAACTTGACGATTTCCTGCTCTGGGCCGCCGGCGGCATCGTG CTCGGGGGACGCATCGGCTACATACTCTTCTACGATCTCGGCTCCATCCTCGACGACCCCCTCCGCGCGATCCAGATCTG GAACGGCGGCATGTCCTTTCACGGCGGTCTTGTGGGCACGACCCTGGCGATGATCATCTTTGCGCGTAGAAACGCGATCC CCATCTGGAGCCTGTTCGACGTGGTGGCTGCCGTGGTGCCTATCGGACTTTTCTTTGGCCGCATCGCCAATTTCATCAAT GGAGAACTCTGGGGCCGCCTGTCTTCTGTGCCCTGGGCGGTCGTCTTCCCGACGGGAGGGCCCTTTGCACGCCATCCGAG CCAGCTCTACGAGGCCGCTCTCGAGGGCCTGGTTCTTCTCGCCGTCCTCGCCTGGTTCGTCTATCGCCGCAAAGCTTTGA AAATCCCCGGCCTCGTCACCGGCATATTCGTCTGCGGCTATGCCGCAAGCCGCATTTTCGTGGAGTTCTTCCGCGAACCG GATGCACAGATCGGCTATCTTGCCGGGGACTGGCTCACTATGGGCATGGTGCTTTCAGTGCCGATGGCGCTTATAGGAAT CTGGGCCATTGCGCGGGCGCGCAGCGCTGCCGCCGCCGCTTGA
Upstream 100 bases:
>100_bases ACCGGGAGCCCTTGTTGCGCCGCAGCAAGGGGGTGCTTGACCGCGCCGCATTCGCTCGTCATGTTCCGCCCAAACCATCG GTCCGGCACGAGAGAGTATC
Downstream 100 bases:
>100_bases CTGGACGGGTCATGACGAATCCTCTCGCCGACAAGATCAAGGCGCTGATCCGGGCCAATGGACCGATCAGCGTTACCGAC TATTTCTCCCTCTGCCTTGC
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues METIATRLAILPFPEIDPVIFTIGPLAVRWYGLAYVVGILLGWFYARRIVQNAALWRNGTPACNLTQLDDFLLWAAGGIV LGGRIGYILFYDLGSILDDPLRAIQIWNGGMSFHGGLVGTTLAMIIFARRNAIPIWSLFDVVAAVVPIGLFFGRIANFIN GELWGRLSSVPWAVVFPTGGPFARHPSQLYEAALEGLVLLAVLAWFVYRRKALKIPGLVTGIFVCGYAASRIFVEFFREP DAQIGYLAGDWLTMGMVLSVPMALIGIWAIARARSAAAAA
Sequences:
>Translated_280_residues METIATRLAILPFPEIDPVIFTIGPLAVRWYGLAYVVGILLGWFYARRIVQNAALWRNGTPACNLTQLDDFLLWAAGGIV LGGRIGYILFYDLGSILDDPLRAIQIWNGGMSFHGGLVGTTLAMIIFARRNAIPIWSLFDVVAAVVPIGLFFGRIANFIN GELWGRLSSVPWAVVFPTGGPFARHPSQLYEAALEGLVLLAVLAWFVYRRKALKIPGLVTGIFVCGYAASRIFVEFFREP DAQIGYLAGDWLTMGMVLSVPMALIGIWAIARARSAAAAA >Mature_280_residues METIATRLAILPFPEIDPVIFTIGPLAVRWYGLAYVVGILLGWFYARRIVQNAALWRNGTPACNLTQLDDFLLWAAGGIV LGGRIGYILFYDLGSILDDPLRAIQIWNGGMSFHGGLVGTTLAMIIFARRNAIPIWSLFDVVAAVVPIGLFFGRIANFIN GELWGRLSSVPWAVVFPTGGPFARHPSQLYEAALEGLVLLAVLAWFVYRRKALKIPGLVTGIFVCGYAASRIFVEFFREP DAQIGYLAGDWLTMGMVLSVPMALIGIWAIARARSAAAAA
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=298, Percent_Identity=40.9395973154362, Blast_Score=217, Evalue=7e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 30576; Mature: 30576
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METIATRLAILPFPEIDPVIFTIGPLAVRWYGLAYVVGILLGWFYARRIVQNAALWRNGT CCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PACNLTQLDDFLLWAAGGIVLGGRIGYILFYDLGSILDDPLRAIQIWNGGMSFHGGLVGT CCCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TLAMIIFARRNAIPIWSLFDVVAAVVPIGLFFGRIANFINGELWGRLSSVPWAVVFPTGG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCC PFARHPSQLYEAALEGLVLLAVLAWFVYRRKALKIPGLVTGIFVCGYAASRIFVEFFREP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC DAQIGYLAGDWLTMGMVLSVPMALIGIWAIARARSAAAAA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure METIATRLAILPFPEIDPVIFTIGPLAVRWYGLAYVVGILLGWFYARRIVQNAALWRNGT CCCHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PACNLTQLDDFLLWAAGGIVLGGRIGYILFYDLGSILDDPLRAIQIWNGGMSFHGGLVGT CCCCHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TLAMIIFARRNAIPIWSLFDVVAAVVPIGLFFGRIANFINGELWGRLSSVPWAVVFPTGG HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEECCCC PFARHPSQLYEAALEGLVLLAVLAWFVYRRKALKIPGLVTGIFVCGYAASRIFVEFFREP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC DAQIGYLAGDWLTMGMVLSVPMALIGIWAIARARSAAAAA CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]