| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397374
Identifier: 150397374
GI number: 150397374
Start: 2243708
End: 2244610
Strand: Direct
Name: 150397374
Synonym: Smed_2173
Alternate gene names: NA
Gene position: 2243708-2244610 (Clockwise)
Preceding gene: 150397372
Following gene: 150397375
Centisome position: 59.33
GC content: 63.01
Gene sequence:
>903_bases ATGCCGCTCAGCATGAACCGCGAGGTGTTCATCACATGCGCCGTCACCGGCGCCGGAGACACCGTCTCGAAATCCAGCAA CGTCCCGGTCACGCCGAAACAGATCGCCGAATCGGCGATCGACGCCGCCAGAGCGGGCGCCGCCGTGGTGCACTGTCACG TGCGCGACCCCGAGACCGGTGCGCCGGCGCGCAGGCTCGATCTCTACAAGGAAGTGACCGATCGCATCCGCTCCGCCGAT ATCGACGTGGTGCTCAACCTGACCGCCGGCATGGGCGGAGACCTCGTCTTCGGGAATGTCGAAAACCCCTTTCCGGTCAA TGAAAAGGGTACGGACATGGCCGGCGCCACCGAACGCGTCGCCCATGTCGCCGAGTGCCTGCCTGAAATCTGCACGCTCG ATTGCGGCACGATGAATTTCTCGCTCGGCGATTACGTCATGACAAACACGCCGTCGATGCTGCGCGAAATGGCGCGCCAG ATGACCGCACTCGGCGTGCGCCCCGAGATCGAAGCCTTCGATACCGGGCACCTTTGGTTCGCCAAGCAGCTCGTCGAGGA AGGCCTGATCGAGGATCCGGTGCTGATCCAGCTCTGCATGGGTATTCCGTGGGGCGCACCGGACGATCTCAACACTTTCA TGGCAATGGTCAACAACGTGCCCTCGAGCTGGACCTTCTCGGCCTTCTCGATCGGCCGCAACGCGATGGCCTATCCCGCC GCCGCAATCCTCGCCGGCGGCAACGTCCGCGTCGGCCTCGAGGATAATCTTTATGTCGGAAAGGGCCAGCTCGCGACCAA TGCCCAGCTCGTGGAGAAGGCGGTTTCCGTCGTGGAGAGCATGGGCGCAAAGATCATCGGACCGGAAGAGGTCCGCAGGA AGCTGAAGCTGACCAAGCGGTAA
Upstream 100 bases:
>100_bases TCCTCCCATCCTTTCCGATACTGTATAGATTGCTTCTGTTTCTGAAAAGCAGTCCGGCGCTTTCTGGCTCGTAATGCAGG CAACGAAAGGGAGGACATCA
Downstream 100 bases:
>100_bases GAGCCGGGGCCCCTCATCCGCCTGCCGGCACCGTCTCCCTGTCAAAACGGGGAAAAAGACGCAAGCCATAGGCACCCAGT CCCCTCTCCCCGCCTGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MPLSMNREVFITCAVTGAGDTVSKSSNVPVTPKQIAESAIDAARAGAAVVHCHVRDPETGAPARRLDLYKEVTDRIRSAD IDVVLNLTAGMGGDLVFGNVENPFPVNEKGTDMAGATERVAHVAECLPEICTLDCGTMNFSLGDYVMTNTPSMLREMARQ MTALGVRPEIEAFDTGHLWFAKQLVEEGLIEDPVLIQLCMGIPWGAPDDLNTFMAMVNNVPSSWTFSAFSIGRNAMAYPA AAILAGGNVRVGLEDNLYVGKGQLATNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTKR
Sequences:
>Translated_300_residues MPLSMNREVFITCAVTGAGDTVSKSSNVPVTPKQIAESAIDAARAGAAVVHCHVRDPETGAPARRLDLYKEVTDRIRSAD IDVVLNLTAGMGGDLVFGNVENPFPVNEKGTDMAGATERVAHVAECLPEICTLDCGTMNFSLGDYVMTNTPSMLREMARQ MTALGVRPEIEAFDTGHLWFAKQLVEEGLIEDPVLIQLCMGIPWGAPDDLNTFMAMVNNVPSSWTFSAFSIGRNAMAYPA AAILAGGNVRVGLEDNLYVGKGQLATNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTKR >Mature_299_residues PLSMNREVFITCAVTGAGDTVSKSSNVPVTPKQIAESAIDAARAGAAVVHCHVRDPETGAPARRLDLYKEVTDRIRSADI DVVLNLTAGMGGDLVFGNVENPFPVNEKGTDMAGATERVAHVAECLPEICTLDCGTMNFSLGDYVMTNTPSMLREMARQM TALGVRPEIEAFDTGHLWFAKQLVEEGLIEDPVLIQLCMGIPWGAPDDLNTFMAMVNNVPSSWTFSAFSIGRNAMAYPAA AILAGGNVRVGLEDNLYVGKGQLATNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTKR
Specific function: Unknown
COG id: COG3246
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32182; Mature: 32051
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSMNREVFITCAVTGAGDTVSKSSNVPVTPKQIAESAIDAARAGAAVVHCHVRDPETG CCCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC APARRLDLYKEVTDRIRSADIDVVLNLTAGMGGDLVFGNVENPFPVNEKGTDMAGATERV CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHH AHVAECLPEICTLDCGTMNFSLGDYVMTNTPSMLREMARQMTALGVRPEIEAFDTGHLWF HHHHHHHHHHHCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH AKQLVEEGLIEDPVLIQLCMGIPWGAPDDLNTFMAMVNNVPSSWTFSAFSIGRNAMAYPA HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHCCCCHHCCH AAILAGGNVRVGLEDNLYVGKGQLATNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTKR HHEEECCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure PLSMNREVFITCAVTGAGDTVSKSSNVPVTPKQIAESAIDAARAGAAVVHCHVRDPETG CCCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC APARRLDLYKEVTDRIRSADIDVVLNLTAGMGGDLVFGNVENPFPVNEKGTDMAGATERV CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHH AHVAECLPEICTLDCGTMNFSLGDYVMTNTPSMLREMARQMTALGVRPEIEAFDTGHLWF HHHHHHHHHHHCCCCCCEECCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH AKQLVEEGLIEDPVLIQLCMGIPWGAPDDLNTFMAMVNNVPSSWTFSAFSIGRNAMAYPA HHHHHHCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEHHHHHCCCCHHCCH AAILAGGNVRVGLEDNLYVGKGQLATNAQLVEKAVSVVESMGAKIIGPEEVRRKLKLTKR HHEEECCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA