| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397181
Identifier: 150397181
GI number: 150397181
Start: 2029480
End: 2030823
Strand: Direct
Name: 150397181
Synonym: Smed_1979
Alternate gene names: NA
Gene position: 2029480-2030823 (Clockwise)
Preceding gene: 150397177
Following gene: 150397185
Centisome position: 53.66
GC content: 59.82
Gene sequence:
>1344_bases ATGAAAAAGCGGCATTTCGGGCTTGCGGTGTGCGTGCTTCCGGCCCTTTATCTGTTGCTCAGTCCCGTCTACGCGTTGCT CAATTACGATCTGTTCGCTGCTGAAGCCCCGCATTTCGTTCGTTATGTGGTGATCCCCGGCCTGCTCGCTGCGTGCTTCC TCGTTCTCGGCCTGTTTGCGAGGCCAAACCTTTCCATTCTTGCGGGCGTCTGCGGATCGAGCATTTTGCTCGGCCTCTTC CTGTTCGAGGCGATGCACACGGTAACGGCCGTATCCGTGCGTTTGGGAATGTTCGGACAACTCAGCGAAGCGCAGGCAGA AACGCTCAGACGCAACGATAATATGGTTCCCGGCTTCACGCTTCGATACCTGAACCGCGTCTCTGGCACCGACGAACTGC CCGAGGCGCTGCTTTCCGGATTTCCGGCTGCGGAAGTGGTGCTTTGCACGTCCGGCGATGGTGTGGTCAGCTACACCGCC GACCGATACGGCTTCAACAATCCCGATGACCTCTATGACGATCCGCTGGATTTGATGCTCCTTGGAGATTCTTTCGTGGA AGGCTTTTGCCTGCCGCCGGGAGATGACCTAGCGTCCCAATTGCGTGCGGGCGGTATCCGCACCGCAAGCATAGGCATAC GCGGAAACGGCCCTCTGACCGAACTCGCTGCTCTCGGCCGCTTTGGCGAGATCTTGCGCCCGCGGCGCGTGATGATGGTC TTCTTCGAAGGCAACGACTGGGAAAATCTGGAACGCGAACTTGCAGTTCCGTGGCTCCGCACGGCGCTGTCGCCGGATGC GGACTTCGGTTTGCAATCTGCCGTGCAGAATGCGATGCGGCAGGCACGAAGCATCTTGACCGAGCATAGGAACGCTGCTG TGACAAGCGTGGACCTCCTCACCAGAACGGCCTTGTTTCGCAATTTCGTCGCACTGCAGCAGACCCTCACGCGCCTCGGG CTGGTTTATCCGAAAATTACTCCAAGCAATCCGGAGTTCAGACGAATCTTGCACCGGGCAAAGCAACTCACCGAGAGCTG GGGCGGCTCTTTTACACTGGTCTACGTGCCGAGGATCGACCGTTTCATGGGACCGTTCTCGTCTGATCGGCCCTTCGATC CGCTGAGGATAAAAGTCCTGGGCGCCGCCGCGGCGGAAGGGATCGAGGTCATTGATCTCAATCCGGCGATCCGCGCGCAG GCCGACCCACTGCTGATGTATGCGCCCGACGCCCATTTCAGTCGCACCGGAGCCGAGTTCGCGGCGAGCGAGATTCTTCG TCGCGTGGGCGCGGCAACACCGGGCTCCCGGCAGCTCCCGGGGCAAGTCGTGGAGAACGAATAG
Upstream 100 bases:
>100_bases ACCCAAGCCGTCACTGCAGAGGAGCAGGATAAGGCGCTCTTAAAGAGACGTTTTCCCTAGTCTTCGCACTATAAACGGTT TGCGAACGAGGATACGCATT
Downstream 100 bases:
>100_bases AGGCTTTTCCGTCCGGATGCCGGCCGAGCGCCGGCCCGGCAACACTGCCGCCGTCAGCCGTGTCCTAGCTGCAGTCGTTG AGCAAGATTGGCGAGCTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFARPNLSILAGVCGSSILLGLF LFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFTLRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTA DRYGFNNPDDLYDDPLDLMLLGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLLTRTALFRNFVALQQTLTRLG LVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRIDRFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQ ADPLLMYAPDAHFSRTGAEFAASEILRRVGAATPGSRQLPGQVVENE
Sequences:
>Translated_447_residues MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFARPNLSILAGVCGSSILLGLF LFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFTLRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTA DRYGFNNPDDLYDDPLDLMLLGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLLTRTALFRNFVALQQTLTRLG LVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRIDRFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQ ADPLLMYAPDAHFSRTGAEFAASEILRRVGAATPGSRQLPGQVVENE >Mature_447_residues MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFARPNLSILAGVCGSSILLGLF LFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFTLRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTA DRYGFNNPDDLYDDPLDLMLLGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLLTRTALFRNFVALQQTLTRLG LVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRIDRFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQ ADPLLMYAPDAHFSRTGAEFAASEILRRVGAATPGSRQLPGQVVENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48902; Mature: 48902
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC RPNLSILAGVCGSSILLGLFLFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH LRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTADRYGFNNPDDLYDDPLDLML HHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCCCHHEEE LGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV ECCHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLL EECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TRTALFRNFVALQQTLTRLGLVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRID HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHH RFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQADPLLMYAPDAHFSRTGAEF HHHCCCCCCCCCCCEEEEEEEHHHHCCEEEEECCCCHHCCCCCEEEECCCCCCHHCCHHH AASEILRRVGAATPGSRQLPGQVVENE HHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKRHFGLAVCVLPALYLLLSPVYALLNYDLFAAEAPHFVRYVVIPGLLAACFLVLGLFA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC RPNLSILAGVCGSSILLGLFLFEAMHTVTAVSVRLGMFGQLSEAQAETLRRNDNMVPGFT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHH LRYLNRVSGTDELPEALLSGFPAAEVVLCTSGDGVVSYTADRYGFNNPDDLYDDPLDLML HHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEHHHCCCCCCCCCCCCCHHEEE LGDSFVEGFCLPPGDDLASQLRAGGIRTASIGIRGNGPLTELAALGRFGEILRPRRVMMV ECCHHHCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEE FFEGNDWENLERELAVPWLRTALSPDADFGLQSAVQNAMRQARSILTEHRNAAVTSVDLL EECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH TRTALFRNFVALQQTLTRLGLVYPKITPSNPEFRRILHRAKQLTESWGGSFTLVYVPRID HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHH RFMGPFSSDRPFDPLRIKVLGAAAAEGIEVIDLNPAIRAQADPLLMYAPDAHFSRTGAEF HHHCCCCCCCCCCCEEEEEEEHHHHCCEEEEECCCCHHCCCCCEEEECCCCCCHHCCHHH AASEILRRVGAATPGSRQLPGQVVENE HHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA