| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150397001
Identifier: 150397001
GI number: 150397001
Start: 1881683
End: 1881946
Strand: Reverse
Name: 150397001
Synonym: Smed_1798
Alternate gene names: NA
Gene position: 1881946-1881683 (Counterclockwise)
Preceding gene: 150397003
Following gene: 150396999
Centisome position: 49.76
GC content: 59.85
Gene sequence:
>264_bases ATGAAAACATCTGCTATCATTATTGCGTCCGCCGTGCTGTCAGCCGGCGGCGCCAATTCGGCGACCGTGACAAACAAGGA CGGCGAGGCTGCTGTTCTGGTGATCGTCGAAGGGGACAGCCGAGTAGAGATGGCACTCAATGCGGGCGCGACGGAAACGT TCTGCCTGAGCGGCTGCTTCCTCACCACTCCAAGCGGCGACCGGGTTGGCCTTCAAGGCGACGAGACAGTGGGAATTGTC GAGGGCTCCGTCGTCGTGAAATAG
Upstream 100 bases:
>100_bases TGCGGTAGGCTGGTTGCGGCTAGAGGGGTGGCTGGCGTCTTCACGTGAATGGAAGGCGGCCGGCCAAAATGGGGACGGCG CGCTTGCGCGCCGAAATGCA
Downstream 100 bases:
>100_bases CTTCGCCCGGAAAGGCGTTTGCGTCAGTCGGACGAGCTTGAGCCGTGCCGCAAGACCGCGGGGCCGAAGCCCCGCGTCGA CGATCCGCGACCGCACGGCG
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MKTSAIIIASAVLSAGGANSATVTNKDGEAAVLVIVEGDSRVEMALNAGATETFCLSGCFLTTPSGDRVGLQGDETVGIV EGSVVVK
Sequences:
>Translated_87_residues MKTSAIIIASAVLSAGGANSATVTNKDGEAAVLVIVEGDSRVEMALNAGATETFCLSGCFLTTPSGDRVGLQGDETVGIV EGSVVVK >Mature_87_residues MKTSAIIIASAVLSAGGANSATVTNKDGEAAVLVIVEGDSRVEMALNAGATETFCLSGCFLTTPSGDRVGLQGDETVGIV EGSVVVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8630; Mature: 8630
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS00583 PFKB_KINASES_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSAIIIASAVLSAGGANSATVTNKDGEAAVLVIVEGDSRVEMALNAGATETFCLSGCF CCCCEEEEEEEEHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEEECEE LTTPSGDRVGLQGDETVGIVEGSVVVK EECCCCCEECCCCCCEEEEEECEEEEC >Mature Secondary Structure MKTSAIIIASAVLSAGGANSATVTNKDGEAAVLVIVEGDSRVEMALNAGATETFCLSGCF CCCCEEEEEEEEHHCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEECCCCCEEEEECEE LTTPSGDRVGLQGDETVGIVEGSVVVK EECCCCCEECCCCCCEEEEEECEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA