| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is blh [H]
Identifier: 150396819
GI number: 150396819
Start: 1704197
End: 1705087
Strand: Reverse
Name: blh [H]
Synonym: Smed_1610
Alternate gene names: 150396819
Gene position: 1705087-1704197 (Counterclockwise)
Preceding gene: 150396820
Following gene: 150396818
Centisome position: 45.09
GC content: 60.38
Gene sequence:
>891_bases ATGGCTGCAGATGCAGCGGCACGACCAAGCGTCAAAGGCTTCTATGAAGCGCGCTCGGGAAGCATCCAATACGTCGTTGC AGATCCGGTGACGAGGCGCTGTGCGATCATCGACCCGGTGCTCGATTTCGACGAGAAGTCGGGATCGATCGAGACCCGGC AGGCGGAGCTCATCCTCGATCATGTCAAAAGGAACGAGCTGACGGTCGAGTGGATCCTCGACACTCATCCCCATGCGGAC CATTTTTCTGCTGCCGCATATTTGAAGGAAATGACGCGGGCGCCGACCGGTATCGGCTGCGAGGTGGTCCGCGTCCAGAA CCTCTGGAAAGGGATCTACAACTGGCCGGAGCTTGCAACGGATGGCTCGCAATGGGATCATCTTTTTGCGGACGGAGAGC AGTTTTCCCTCGGTTCGCTCGAAGGTCGCGTGATCTACTCACCGGGCCACACGCTTGCTTCGATAACCTATGTCATCGGC GATGCGGCGTTCGTGCACGATACGATCTTCATGCCGGACAGCGGCACCGCGCGTGCCGATTTCCCCGGAGGAGACGCCCG GCAATTGTGGCGCTCCATAAATACCATTCTCGCATTGCCGGATGAAACCCGGATCTTCACCGGTCATGACTATCGGCCGA ACGGGCGAGAGCCGCGGTGGGAAAGCACGGTGTACGAGGAGAAGAGCCGCAATTCCCATGTTGTCGGCATGACCGAAGAG GCTTTCGTCGCGTTGCGCGAGGCGCGTGACAGGACGCTGCCGATGCCCAAGCTGATCCTTCACGCGCTGCAGGTCAACAT TTGCGGCGGCCGCCTGCCGGAACCGGAGGCCAACGGCGCCCGTTACCTGAAGTTTCCACTGAACGCGCTCAAGGGAGCGG CGTGGGGCTGA
Upstream 100 bases:
>100_bases GGATTTCGTTTCGTGGCCGGACAATGGCCGGATAGACGAAACTTAGCAGCAAAAACGACATTCATTATATTTTATCGTAT ACTTATAATGGAGACCGATC
Downstream 100 bases:
>100_bases GGTCCTGTCATGGGAACGATTACCAAATTCCGGAACATTCGCCCTTGCATGAGAGAGCGGGCCGACGAGGCCGCGGCACT GCTCAAGGCGGTTGCAAACG
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MAADAAARPSVKGFYEARSGSIQYVVADPVTRRCAIIDPVLDFDEKSGSIETRQAELILDHVKRNELTVEWILDTHPHAD HFSAAAYLKEMTRAPTGIGCEVVRVQNLWKGIYNWPELATDGSQWDHLFADGEQFSLGSLEGRVIYSPGHTLASITYVIG DAAFVHDTIFMPDSGTARADFPGGDARQLWRSINTILALPDETRIFTGHDYRPNGREPRWESTVYEEKSRNSHVVGMTEE AFVALREARDRTLPMPKLILHALQVNICGGRLPEPEANGARYLKFPLNALKGAAWG
Sequences:
>Translated_296_residues MAADAAARPSVKGFYEARSGSIQYVVADPVTRRCAIIDPVLDFDEKSGSIETRQAELILDHVKRNELTVEWILDTHPHAD HFSAAAYLKEMTRAPTGIGCEVVRVQNLWKGIYNWPELATDGSQWDHLFADGEQFSLGSLEGRVIYSPGHTLASITYVIG DAAFVHDTIFMPDSGTARADFPGGDARQLWRSINTILALPDETRIFTGHDYRPNGREPRWESTVYEEKSRNSHVVGMTEE AFVALREARDRTLPMPKLILHALQVNICGGRLPEPEANGARYLKFPLNALKGAAWG >Mature_295_residues AADAAARPSVKGFYEARSGSIQYVVADPVTRRCAIIDPVLDFDEKSGSIETRQAELILDHVKRNELTVEWILDTHPHADH FSAAAYLKEMTRAPTGIGCEVVRVQNLWKGIYNWPELATDGSQWDHLFADGEQFSLGSLEGRVIYSPGHTLASITYVIGD AAFVHDTIFMPDSGTARADFPGGDARQLWRSINTILALPDETRIFTGHDYRPNGREPRWESTVYEEKSRNSHVVGMTEEA FVALREARDRTLPMPKLILHALQVNICGGRLPEPEANGARYLKFPLNALKGAAWG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=267, Percent_Identity=29.2134831460674, Blast_Score=89, Evalue=6e-18, Organism=Caenorhabditis elegans, GI17538952, Length=274, Percent_Identity=28.4671532846715, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI221330176, Length=262, Percent_Identity=29.7709923664122, Blast_Score=100, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32931; Mature: 32800
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADAAARPSVKGFYEARSGSIQYVVADPVTRRCAIIDPVLDFDEKSGSIETRQAELILD CCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHEEECHHHCCCCCCCCCCHHHHHHHHH HVKRNELTVEWILDTHPHADHFSAAAYLKEMTRAPTGIGCEVVRVQNLWKGIYNWPELAT HHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCHHCC DGSQWDHLFADGEQFSLGSLEGRVIYSPGHTLASITYVIGDAAFVHDTIFMPDSGTARAD CCCCCCCEECCCCEEEECCCCCEEEECCCCCHHHHHHHHCCHHHHEEEEEECCCCCCCCC FPGGDARQLWRSINTILALPDETRIFTGHDYRPNGREPRWESTVYEEKSRNSHVVGMTEE CCCCHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHH AFVALREARDRTLPMPKLILHALQVNICGGRLPEPEANGARYLKFPLNALKGAAWG HHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECHHHHCCCCCC >Mature Secondary Structure AADAAARPSVKGFYEARSGSIQYVVADPVTRRCAIIDPVLDFDEKSGSIETRQAELILD CCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHEEECHHHCCCCCCCCCCHHHHHHHHH HVKRNELTVEWILDTHPHADHFSAAAYLKEMTRAPTGIGCEVVRVQNLWKGIYNWPELAT HHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCHHCC DGSQWDHLFADGEQFSLGSLEGRVIYSPGHTLASITYVIGDAAFVHDTIFMPDSGTARAD CCCCCCCEECCCCEEEECCCCCEEEECCCCCHHHHHHHHCCHHHHEEEEEECCCCCCCCC FPGGDARQLWRSINTILALPDETRIFTGHDYRPNGREPRWESTVYEEKSRNSHVVGMTEE CCCCHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCEEEEECHH AFVALREARDRTLPMPKLILHALQVNICGGRLPEPEANGARYLKFPLNALKGAAWG HHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCEEEEECHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]