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The map label for this gene is 150396820

Identifier: 150396820

GI number: 150396820

Start: 1705251

End: 1706423

Strand: Reverse

Name: 150396820

Synonym: Smed_1611

Alternate gene names: NA

Gene position: 1706423-1705251 (Counterclockwise)

Preceding gene: 150396821

Following gene: 150396819

Centisome position: 45.12

GC content: 62.15

Gene sequence:

>1173_bases
ATGAAGGCGGCAATCAGTATGGCGTATGTTTCTCTTCTCCATCGTCCCCTGGCGGCGCTGCTATTGTCCATTCCGCTCGT
TGCCTGCACCACGGACGTGCTTGCACCCCCGGCTAGAATCGACGGGGGCGCCCGTGTCGGCGCAATCAGCCCGGCCCCGG
TTGCGATGCCGGAGCAGAAGGTTGCTGCCTATCCCGCTGAAGGACCCGTCGCGATAGCCAGTCAGACCTCTGTTACGCCG
GCGGCCAGCAGCGCAGTTCCGCCCGAAGGTGTGAACATGGACGCCATGCTTGGCGTCGAACCTGTCGTTGGGCTGGCGCA
GGAGCAGTCGCGTGAAATCGCGGAAGGGAATACAACGCAGCCGGTCGTGGCCGGAATCGGCGAGGGCGATGTCCGCCAGC
TTGCCGGAACGCCGGAGCCGGCAGCACCGGCGGTCGAGACGAACCCCGGCTTCGATCCCGACCTGCCGCCTCTGACACCG
GCAAAGAATTCGGCCGTGGAAGCCAAAAGTGGGCGCGCTCTCGCGCCGCAACGGTCGGCGCCTGCCGAGGAATCACAGCA
GGTCGCTTTCATACCCCGCGCCCGCAGCCCGCTTTCCGCGCCGTCACATGCCGGCGCAATGCCGGGTCCGGAGGTCGCCT
GCCGGCAACGGTTGAAACAGCTCGGCGTCATATTCCGTGACGTACCGCAAATCTACAACGGACCGTCCTGCGGTATCGAT
TACCCGATCGAACTCAGCGGCCTTTCCGGCGATATCGCCGTCAAGCCCGCGGTGAAGCTCAACTGCCAGGTGACCGAAGC
ATTCGCCAAATGGGTGAAGTACGAGCTCGCGCCATCGTCGCGCTACCGTTACTGGTCGGGAGTGAAGACGATCAAGCCGC
TCGGCGGCTATTCCTGCCGGACGATGAACTCCCGGCGCGGTAATCCCATGTCGGAACATTCGCGCGGAAATGCGATCGAT
GTCGGCAAATTCGTGCTGAAGAACGGCAAGGAAATCGATGTCCGCCGGAAAGGTCTCTTCGCCTTTCGCGAGAGGGGCCT
GTTGAAGGCCGTACGCTCCGATAGCTGCAAGTATTTCAATACGGTCCTTGGTCCTGGAAGCGATCCTTTCCACAAGGATC
ATTTCCACTTCGATTTAAGGACGCGCAAAACCGGTTACCGGCATTGCGACTAG

Upstream 100 bases:

>100_bases
AGCCGACTTTGTCGACCGCGCGCCCGCTTGGCGACATCTCGCACGGTCACTCTCGGCTTTGGGCAGGCGGCGGAGCGACA
AGGCGGGAGCTTTGTCATGG

Downstream 100 bases:

>100_bases
GCGGGCCGAGGTGAGGACCGGCAGGCCAGATTAGGTGTTAGCCGTTAGTGGAGCGGTGCGCTAGGATTTCGTTTCGTGGC
CGGACAATGGCCGGATAGAC

Product: extensin family protein

Products: NA

Alternate protein names: Extensin-Like Protein; Extensin-Like; Extensin-Like Protein C-Terminus; Inner Membrane Protein; Conserved Protein; Extensin Domain-Containing Protein

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MKAAISMAYVSLLHRPLAALLLSIPLVACTTDVLAPPARIDGGARVGAISPAPVAMPEQKVAAYPAEGPVAIASQTSVTP
AASSAVPPEGVNMDAMLGVEPVVGLAQEQSREIAEGNTTQPVVAGIGEGDVRQLAGTPEPAAPAVETNPGFDPDLPPLTP
AKNSAVEAKSGRALAPQRSAPAEESQQVAFIPRARSPLSAPSHAGAMPGPEVACRQRLKQLGVIFRDVPQIYNGPSCGID
YPIELSGLSGDIAVKPAVKLNCQVTEAFAKWVKYELAPSSRYRYWSGVKTIKPLGGYSCRTMNSRRGNPMSEHSRGNAID
VGKFVLKNGKEIDVRRKGLFAFRERGLLKAVRSDSCKYFNTVLGPGSDPFHKDHFHFDLRTRKTGYRHCD

Sequences:

>Translated_390_residues
MKAAISMAYVSLLHRPLAALLLSIPLVACTTDVLAPPARIDGGARVGAISPAPVAMPEQKVAAYPAEGPVAIASQTSVTP
AASSAVPPEGVNMDAMLGVEPVVGLAQEQSREIAEGNTTQPVVAGIGEGDVRQLAGTPEPAAPAVETNPGFDPDLPPLTP
AKNSAVEAKSGRALAPQRSAPAEESQQVAFIPRARSPLSAPSHAGAMPGPEVACRQRLKQLGVIFRDVPQIYNGPSCGID
YPIELSGLSGDIAVKPAVKLNCQVTEAFAKWVKYELAPSSRYRYWSGVKTIKPLGGYSCRTMNSRRGNPMSEHSRGNAID
VGKFVLKNGKEIDVRRKGLFAFRERGLLKAVRSDSCKYFNTVLGPGSDPFHKDHFHFDLRTRKTGYRHCD
>Mature_390_residues
MKAAISMAYVSLLHRPLAALLLSIPLVACTTDVLAPPARIDGGARVGAISPAPVAMPEQKVAAYPAEGPVAIASQTSVTP
AASSAVPPEGVNMDAMLGVEPVVGLAQEQSREIAEGNTTQPVVAGIGEGDVRQLAGTPEPAAPAVETNPGFDPDLPPLTP
AKNSAVEAKSGRALAPQRSAPAEESQQVAFIPRARSPLSAPSHAGAMPGPEVACRQRLKQLGVIFRDVPQIYNGPSCGID
YPIELSGLSGDIAVKPAVKLNCQVTEAFAKWVKYELAPSSRYRYWSGVKTIKPLGGYSCRTMNSRRGNPMSEHSRGNAID
VGKFVLKNGKEIDVRRKGLFAFRERGLLKAVRSDSCKYFNTVLGPGSDPFHKDHFHFDLRTRKTGYRHCD

Specific function: Unknown

COG id: COG3921

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41463; Mature: 41463

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAAISMAYVSLLHRPLAALLLSIPLVACTTDVLAPPARIDGGARVGAISPAPVAMPEQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHH
VAAYPAEGPVAIASQTSVTPAASSAVPPEGVNMDAMLGVEPVVGLAQEQSREIAEGNTTQ
HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCC
PVVAGIGEGDVRQLAGTPEPAAPAVETNPGFDPDLPPLTPAKNSAVEAKSGRALAPQRSA
CEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
PAEESQQVAFIPRARSPLSAPSHAGAMPGPEVACRQRLKQLGVIFRDVPQIYNGPSCGID
CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YPIELSGLSGDIAVKPAVKLNCQVTEAFAKWVKYELAPSSRYRYWSGVKTIKPLGGYSCR
CCEEECCCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
TMNSRRGNPMSEHSRGNAIDVGKFVLKNGKEIDVRRKGLFAFRERGLLKAVRSDSCKYFN
ECCCCCCCCCCHHCCCCEEHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHH
TVLGPGSDPFHKDHFHFDLRTRKTGYRHCD
HHCCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure
MKAAISMAYVSLLHRPLAALLLSIPLVACTTDVLAPPARIDGGARVGAISPAPVAMPEQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHH
VAAYPAEGPVAIASQTSVTPAASSAVPPEGVNMDAMLGVEPVVGLAQEQSREIAEGNTTQ
HHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCC
PVVAGIGEGDVRQLAGTPEPAAPAVETNPGFDPDLPPLTPAKNSAVEAKSGRALAPQRSA
CEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
PAEESQQVAFIPRARSPLSAPSHAGAMPGPEVACRQRLKQLGVIFRDVPQIYNGPSCGID
CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
YPIELSGLSGDIAVKPAVKLNCQVTEAFAKWVKYELAPSSRYRYWSGVKTIKPLGGYSCR
CCEEECCCCCCEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE
TMNSRRGNPMSEHSRGNAIDVGKFVLKNGKEIDVRRKGLFAFRERGLLKAVRSDSCKYFN
ECCCCCCCCCCHHCCCCEEHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHH
TVLGPGSDPFHKDHFHFDLRTRKTGYRHCD
HHCCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA