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The map label for this gene is 150396807

Identifier: 150396807

GI number: 150396807

Start: 1694250

End: 1694903

Strand: Reverse

Name: 150396807

Synonym: Smed_1598

Alternate gene names: NA

Gene position: 1694903-1694250 (Counterclockwise)

Preceding gene: 150396808

Following gene: 150396806

Centisome position: 44.82

GC content: 62.84

Gene sequence:

>654_bases
GTGGGATCATGGCGAGGATCGGCGGTGACTGAAGAGCACCTGCAGGCGTTGCGGGAGGCGATTTCGCTCTGTCGCCGCTG
TCGCGATGACCCGGCGCGTGGCATGGATCACCGGTTGCCGCACGAGCCGAGGCCGGTTGCGGTACTTTCCTCCTCGGCGC
GAATTTTGATCGCCGGGCAGGCACCCGGTTTGCGGGTACATGAAAGCGGTCTTCCATTCAACGACGCATCGGGAGACCGG
CTGAGGCAATGGCTGTCTGTTGACCGCACGGCATTTTACGATCCGGGAAATTTTGCGATCGTGCCGATGGGTTTCTGTTT
TCCAGGCTATGATGGACACGGCAGCGACCTGCCGCCGAGAAGCGAGTGCGCTTCGCTGTGGCGCCGCAGAGCGATCGACG
CCATGCCGCAGATCGAGCTGGTGCTGGCGGTCGGCCATTATGCGCAGCGCTGGCATCTCGGACAGGGCTGTCCCAAGTCC
ATGACGGAGACTGTGCGCAACTGGCGGCGCTACGCGAAAAGCAATTCCGGCACCCCCGTATTGCCGCTGCCGCATCCGAG
CTGGCGCAATACCGGCTGGCTCCGGCGTAACCTATGGTTCGAAACCGAGTTGCTGCCCTTCCTGCGTGAGCAGGTGAAGG
CGCTGACAGTCTGA

Upstream 100 bases:

>100_bases
CCGCAGGAATGGCGCCGGTCGAACGGCGGGGTGGATGAGCCCCCGCACCGAACGAGCGACCGGATTGAGACCATTATCCG
GTGGCTTCAGGAATATTCGA

Downstream 100 bases:

>100_bases
AAAAATTTTCTTTATTTTCACGAATTGCGCGCTATAGAGGGAAAAATAATTCGAGAGGATTTTTCCATGGATCGCCTTGA
CCGCAAGATCCTGCGGCTTT

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MGSWRGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQAPGLRVHESGLPFNDASGDR
LRQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPRSECASLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKS
MTETVRNWRRYAKSNSGTPVLPLPHPSWRNTGWLRRNLWFETELLPFLREQVKALTV

Sequences:

>Translated_217_residues
MGSWRGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQAPGLRVHESGLPFNDASGDR
LRQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPRSECASLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKS
MTETVRNWRRYAKSNSGTPVLPLPHPSWRNTGWLRRNLWFETELLPFLREQVKALTV
>Mature_216_residues
GSWRGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQAPGLRVHESGLPFNDASGDRL
RQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPRSECASLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKSM
TETVRNWRRYAKSNSGTPVLPLPHPSWRNTGWLRRNLWFETELLPFLREQVKALTV

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 24572; Mature: 24441

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSWRGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC
APGLRVHESGLPFNDASGDRLRQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPR
CCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCH
SECASLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKSMTETVRNWRRYAKSNSGTPV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
LPLPHPSWRNTGWLRRNLWFETELLPFLREQVKALTV
EECCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GSWRGSAVTEEHLQALREAISLCRRCRDDPARGMDHRLPHEPRPVAVLSSSARILIAGQ
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEC
APGLRVHESGLPFNDASGDRLRQWLSVDRTAFYDPGNFAIVPMGFCFPGYDGHGSDLPPR
CCCCEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCH
SECASLWRRRAIDAMPQIELVLAVGHYAQRWHLGQGCPKSMTETVRNWRRYAKSNSGTPV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEE
LPLPHPSWRNTGWLRRNLWFETELLPFLREQVKALTV
EECCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]