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The map label for this gene is 150396796

Identifier: 150396796

GI number: 150396796

Start: 1683609

End: 1685771

Strand: Reverse

Name: 150396796

Synonym: Smed_1587

Alternate gene names: NA

Gene position: 1685771-1683609 (Counterclockwise)

Preceding gene: 150396801

Following gene: 150396795

Centisome position: 44.57

GC content: 63.66

Gene sequence:

>2163_bases
ATGTCGATTCGATCCAGACTTTTCGCAACAGTGGCCTTGCCCGTACTTTCGGCCTCCCTGGTGGTTCAGCCCGCGTTCGC
GGACAGCCTGAGCGCGCCTTTTGAGGTGGCTCAGGAAGGTGCGGACCAACAATCCCCCGAGGATTTGCTGCTACTGAAGC
GCAAGCAGCGCCAGGGCGAAGAAGAATCTCAAGGACAGGCGGAAGAGCAGCAGCCCGCAGCCGAGGAGAGTGCTCCGCAG
CAGGCGGAAGAAGAGGCCCCCCGGCGCAAGAAGCGCCAGCAGCAGGCTGAAGAACAGCAACCCGCGGCCGAGGAGAGCGC
TCCGCAGCAGGCCGAAGAAGAGGCCCCCCGGCGCAAGAAGCGCCAGCAGCAGGCTGAGGAACAGCAGCCCGCAGCCGAGG
AGAGCGCTCCGCAGCAGGCCGAAGAAGAGGCCCCCAGGCGCAAGAAACGCCAGCAGCAGGCTGAGGAACAGCAGCCCGCA
GCCGAGGAGAGCGCTCCGCAGCAGGCCGAAGAAGAGGCACCCGCGCGCAAGAAGCGCCAGCAGCAGGCTGAGGAACAGCA
GCCCGCAGCCGAGGAGAGTGCACCGCAGCAGGCCGAAGAAGAGGCACCCGCGCGCAGGAAGCGCCAGCAGCAGGCTAAAG
AACAACAGCCCGCGGCCGAGGAGGGCACTCCGCAGCAGGCCGAAGAGCAGCTGCAAACGGATGAACAGAAAGCCGCGGAA
CAGCCGGGTACCCAACCCGAGAGCGATGCGACCGCGGAGCAGCCTGCCCCTGAGGCGCCAGCCGAGCAGACGGGCGAGGG
CGAGCAGCAGCCGGTGCCCGGCACGGAACAACCCGCAACTGCGGAGCAGCAAGGCGACGAGCCCGAGGGCCAGCAGGCGC
CAGAAGTGGTGGACGAACGCTCGACGGAGGAACGGCAGAAGATCGCTGACGACCCCTCAGCGTCCGACGATACCGTCGTG
CTTCCGGTTGAGAGGGGCGCAGCCGTCCTCGATAGCGACAAGGACGCCGACATTGCCGGGGGTAATGAGGGGCGCGAAAC
GCGACGCAAACAGCGCGAGGAACTGCGCGCCACGCAGGAGAGCGTAGAACCTCCGGCCGACGATGCGGCAGCACAGGCCG
CGATCCCGGCGGAAGCCAGGGAAGAGATTCCTCAGAAGATCGAGGCGGCGCTCAGCGAAGAGGGCGAGCGTGTTGAAGAG
GCTCCGACCTTCGCCGTGCCGCAGACGACAAACATCGTCAACAACACGGTCATAAACAACACGCAGATCAACAACACGAC
CGTCAATAACACCACTGAGAACAACGTGACGGAAGTGCGGGTTGTCGAAGAGGTCGACGATCGCGTCATCCTCGGCGTCG
GCGACCGCATCTTCGTGCGCGGTGACGACCGGCCGCGTCTGCGACTGAATTCGGAAGAGAGTTTTTATGAGAATCTTCCG
AGAGGCCGCGTTCGCGAGACGATCGTTCGCCCCGGCGGCTATCGGATCGTTACCATCTACAACCAGTATGGCGACGTCCT
GACGCGCACGCGTATCGACCGTGGCGGCGACGAATATATCATGATGTATTCGCCTGAGTATGAAGATGACCGGCCCGCTA
TTATCGACGTCGGTTATGAGTTGCCGCCTATGCGCCTGACGATACCCGTCGACGACTATATCGTCGACTACGCCGACGAT
CCGGATCGGGACTATTACGAATTCCTGTCCGAGCCGCCGGTCGAAACGGTCGAGCGTGTCTACACGATCGACGAGGTTCG
CCACTCCGCTCGCCTGCGCGACAAGGTTCGCCGTATCGATCTCGACACCATCACCTTCGCCACGGGCAGCGCCGAAGTGT
CGATGTCGCAGGCAAAAACCATGCGCAAGGTTGCAGAGGCGATGAACAAGGTCCTGGAGAAGGATCCGGGTGAGACCTTC
TTCATCGAGGGGCACACCGATGCCGTCGGCGCGGATCAGTCCAACCTCGTTCTCTCCGACGAACGTGCCGAATCCGTCGC
GGTACTCCTGACGGAGGTCTATGGCGTCCCAGCCGAAAACCTCGTTACCCAGGGCTATGGCGAGCGGTTCCTAAAGATCC
GCACGGACGGCCCCGAACAGGAGAACCGCCGGGTCACCATCCGCCGCGTGACACCGCTGGTACGCCCTGTCGCGCAGCGA
TAA

Upstream 100 bases:

>100_bases
GCGCGGATCAGGCCCTGTGACGAGGGCGCCATGGTGGGTAACGCGATTGGTTGCGGGTGCACACCAGGCGTCAGGACCTC
CGAACAAGAGGAAGAAATTA

Downstream 100 bases:

>100_bases
CCACAGGCGCCTGAACACTGCAATCGGGGTCGGGAAACCGGCCCCGTTTATTTTTCGTGACGAATCAATCTTGAGTTGTG
TAAATTATCCAACCTGATGC

Product: OmpA/MotB domain-containing protein

Products: NA

Alternate protein names: OmpA/MotB; Outer Membrane Protein OmpA/MotB Family; OmpA/MotB Domain Protein; OmpA Family Protein; Outer Membrane Protein; OmpA Family Membrane Protein; Outer Membrane Protein OmpA Family

Number of amino acids: Translated: 720; Mature: 719

Protein sequence:

>720_residues
MSIRSRLFATVALPVLSASLVVQPAFADSLSAPFEVAQEGADQQSPEDLLLLKRKQRQGEEESQGQAEEQQPAAEESAPQ
QAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPA
AEESAPQQAEEEAPARKKRQQQAEEQQPAAEESAPQQAEEEAPARRKRQQQAKEQQPAAEEGTPQQAEEQLQTDEQKAAE
QPGTQPESDATAEQPAPEAPAEQTGEGEQQPVPGTEQPATAEQQGDEPEGQQAPEVVDERSTEERQKIADDPSASDDTVV
LPVERGAAVLDSDKDADIAGGNEGRETRRKQREELRATQESVEPPADDAAAQAAIPAEAREEIPQKIEAALSEEGERVEE
APTFAVPQTTNIVNNTVINNTQINNTTVNNTTENNVTEVRVVEEVDDRVILGVGDRIFVRGDDRPRLRLNSEESFYENLP
RGRVRETIVRPGGYRIVTIYNQYGDVLTRTRIDRGGDEYIMMYSPEYEDDRPAIIDVGYELPPMRLTIPVDDYIVDYADD
PDRDYYEFLSEPPVETVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETF
FIEGHTDAVGADQSNLVLSDERAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPEQENRRVTIRRVTPLVRPVAQR

Sequences:

>Translated_720_residues
MSIRSRLFATVALPVLSASLVVQPAFADSLSAPFEVAQEGADQQSPEDLLLLKRKQRQGEEESQGQAEEQQPAAEESAPQ
QAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPA
AEESAPQQAEEEAPARKKRQQQAEEQQPAAEESAPQQAEEEAPARRKRQQQAKEQQPAAEEGTPQQAEEQLQTDEQKAAE
QPGTQPESDATAEQPAPEAPAEQTGEGEQQPVPGTEQPATAEQQGDEPEGQQAPEVVDERSTEERQKIADDPSASDDTVV
LPVERGAAVLDSDKDADIAGGNEGRETRRKQREELRATQESVEPPADDAAAQAAIPAEAREEIPQKIEAALSEEGERVEE
APTFAVPQTTNIVNNTVINNTQINNTTVNNTTENNVTEVRVVEEVDDRVILGVGDRIFVRGDDRPRLRLNSEESFYENLP
RGRVRETIVRPGGYRIVTIYNQYGDVLTRTRIDRGGDEYIMMYSPEYEDDRPAIIDVGYELPPMRLTIPVDDYIVDYADD
PDRDYYEFLSEPPVETVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETF
FIEGHTDAVGADQSNLVLSDERAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPEQENRRVTIRRVTPLVRPVAQR
>Mature_719_residues
SIRSRLFATVALPVLSASLVVQPAFADSLSAPFEVAQEGADQQSPEDLLLLKRKQRQGEEESQGQAEEQQPAAEESAPQQ
AEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAA
EESAPQQAEEEAPARKKRQQQAEEQQPAAEESAPQQAEEEAPARRKRQQQAKEQQPAAEEGTPQQAEEQLQTDEQKAAEQ
PGTQPESDATAEQPAPEAPAEQTGEGEQQPVPGTEQPATAEQQGDEPEGQQAPEVVDERSTEERQKIADDPSASDDTVVL
PVERGAAVLDSDKDADIAGGNEGRETRRKQREELRATQESVEPPADDAAAQAAIPAEAREEIPQKIEAALSEEGERVEEA
PTFAVPQTTNIVNNTVINNTQINNTTVNNTTENNVTEVRVVEEVDDRVILGVGDRIFVRGDDRPRLRLNSEESFYENLPR
GRVRETIVRPGGYRIVTIYNQYGDVLTRTRIDRGGDEYIMMYSPEYEDDRPAIIDVGYELPPMRLTIPVDDYIVDYADDP
DRDYYEFLSEPPVETVERVYTIDEVRHSARLRDKVRRIDLDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFF
IEGHTDAVGADQSNLVLSDERAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPEQENRRVTIRRVTPLVRPVAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80308; Mature: 80177

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIRSRLFATVALPVLSASLVVQPAFADSLSAPFEVAQEGADQQSPEDLLLLKRKQRQGE
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCC
EESQGQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKK
HHHHCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
RQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPARKKRQ
HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHH
QQAEEQQPAAEESAPQQAEEEAPARRKRQQQAKEQQPAAEEGTPQQAEEQLQTDEQKAAE
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QPGTQPESDATAEQPAPEAPAEQTGEGEQQPVPGTEQPATAEQQGDEPEGQQAPEVVDER
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHC
STEERQKIADDPSASDDTVVLPVERGAAVLDSDKDADIAGGNEGRETRRKQREELRATQE
CHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SVEPPADDAAAQAAIPAEAREEIPQKIEAALSEEGERVEEAPTFAVPQTTNIVNNTVINN
HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCEECC
TQINNTTVNNTTENNVTEVRVVEEVDDRVILGVGDRIFVRGDDRPRLRLNSEESFYENLP
CCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEECCCEEEEECCCCCCEEECCCHHHHHHCC
RGRVRETIVRPGGYRIVTIYNQYGDVLTRTRIDRGGDEYIMMYSPEYEDDRPAIIDVGYE
CCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCC
LPPMRLTIPVDDYIVDYADDPDRDYYEFLSEPPVETVERVYTIDEVRHSARLRDKVRRID
CCCCEEEECHHHHEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLVLSD
CHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECC
ERAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPEQENRRVTIRRVTPLVRPVAQR
HHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIRSRLFATVALPVLSASLVVQPAFADSLSAPFEVAQEGADQQSPEDLLLLKRKQRQGE
CHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHCCC
EESQGQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPRRKK
HHHHCCCHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHH
RQQQAEEQQPAAEESAPQQAEEEAPRRKKRQQQAEEQQPAAEESAPQQAEEEAPARKKRQ
HHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHH
QQAEEQQPAAEESAPQQAEEEAPARRKRQQQAKEQQPAAEEGTPQQAEEQLQTDEQKAAE
HHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
QPGTQPESDATAEQPAPEAPAEQTGEGEQQPVPGTEQPATAEQQGDEPEGQQAPEVVDER
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHC
STEERQKIADDPSASDDTVVLPVERGAAVLDSDKDADIAGGNEGRETRRKQREELRATQE
CHHHHHHHCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
SVEPPADDAAAQAAIPAEAREEIPQKIEAALSEEGERVEEAPTFAVPQTTNIVNNTVINN
HCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHCCEECC
TQINNTTVNNTTENNVTEVRVVEEVDDRVILGVGDRIFVRGDDRPRLRLNSEESFYENLP
CCCCCCCCCCCCCCCCEEEEEHHHCCCEEEEECCCEEEEECCCCCCEEECCCHHHHHHCC
RGRVRETIVRPGGYRIVTIYNQYGDVLTRTRIDRGGDEYIMMYSPEYEDDRPAIIDVGYE
CCHHHHHHCCCCCEEEEEEECHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEECCCC
LPPMRLTIPVDDYIVDYADDPDRDYYEFLSEPPVETVERVYTIDEVRHSARLRDKVRRID
CCCCEEEECHHHHEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LDTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLVLSD
CHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEECC
ERAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPEQENRRVTIRRVTPLVRPVAQR
HHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECCCCCCCCCEEEHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA