Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150396638

Identifier: 150396638

GI number: 150396638

Start: 1506918

End: 1507964

Strand: Direct

Name: 150396638

Synonym: Smed_1424

Alternate gene names: NA

Gene position: 1506918-1507964 (Clockwise)

Preceding gene: 150396635

Following gene: 150396639

Centisome position: 39.85

GC content: 55.97

Gene sequence:

>1047_bases
ATGGCGCGCGCGCCGAGGCAGGTTGTGTCATGGCTGGGATATATGACTACGCGCATTATCAGGTCGCTTCGGAAGAGGTT
CCGGCGTGCATTTAAGCCGCGGACGGTTTCTATATTCGGGGTCAAACTTATCGCGGCAGACGAACGTGTTCCCCCGTATC
TGCAAGACCTGATGTATCGCGAGGTCTACGAAGACACAGAGCGAAACATCCTTCTAAAGATACTGAAGCCAAGCGCAAGG
GTTCTGGAAATAGGGACCGGCGTCGGCTTTATTGCCGCTCTCGCTGCCGCAATTTGCGGTCAGGATAACGTCTCGACATA
TGAGGCAAACAGCAGCCTTGCCAGCCTCATACGCGACAACTTCCGCCTGAATCAACTAGAGCCACATCTCGTCCTAAAGG
CCGTTACTTCAGACGGCCGGACGGTTTCGTTCCATCAGGCCGAAAATGTCATCTCCTCAAGCATTTTCGACCGGAAGATT
GTTGGACACACGATTGAAGTGGAGAGCGTGAAGTTTTCCCATATCCTCGATCGTCATCGGCCTGACGTTCTGATCATGGA
TGTCGAGGGTGCCGAGGACGAGCTCCTCCGCATCCCCGGCTTTGGCAGCGTCCAACATATTCCCGTAGAACTCCAGCCGC
ACATCATCGGCCGGGATAAGGTGGATGAGCTGAAGCGCATAGTTGAACTCCGCGGCTTCCGGCAGCGGTTCAGCGACCAT
CTCTCAGCTAGGCGCATCAGAACTATCAATGCCTTGCGTGCTGCCCCTCCTCTTGCCATGGATGCCGGATTGAAGATACT
GGCGCCAGACGCAGTTTTCGCCACGATGGCGCAAGCGTGCCAAGGGGTCCGCGATCAGCTGAGACGTCATGAGAATCTTC
ATCCTCGCTGGAATTCTGATCGGAGCCTTGCTCGTGTTCTTGCTCGTATCGGGCATTGCAGACATCCCATGCCAGGCAGG
CAGCTGGGATCCCGGCAAGTACACCTGCACTCATACGGGAGTCACGTCGTGACAACGAGAGCGCTCGCCCGTTTCACCCG
TGCATGA

Upstream 100 bases:

>100_bases
TTTCGAAGGCCGCTCCGCCAGTTGGCAACGAGTCAGATCCGCCGCGTCGGAGGCACGATGTTCTATTATTGCTGGTTGTA
TTGGTACAACTTTTCTATTA

Downstream 100 bases:

>100_bases
TATGAAGCTGCATGACCGACACCGAACAGCAGTATGAGTTTTCAGAATTCTCCGGCCAATTCGTCGACGACGGAGTCGTG
GTGGTGATCGGCATCTACCG

Product: FkbM family methyltransferase

Products: NA

Alternate protein names: Methyltransferase FkbM Family; Methyltransferase FkbM; GSCFA Family; Methyltransferase FkbM Family Protein

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYREVYEDTERNILLKILKPSAR
VLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDNFRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKI
VGHTIEVESVKFSHILDRHRPDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH
LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSDRSLARVLARIGHCRHPMPGR
QLGSRQVHLHSYGSHVVTTRALARFTRA

Sequences:

>Translated_348_residues
MARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYREVYEDTERNILLKILKPSAR
VLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDNFRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKI
VGHTIEVESVKFSHILDRHRPDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH
LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSDRSLARVLARIGHCRHPMPGR
QLGSRQVHLHSYGSHVVTTRALARFTRA
>Mature_347_residues
ARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYREVYEDTERNILLKILKPSARV
LEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDNFRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKIV
GHTIEVESVKFSHILDRHRPDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDHL
SARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSDRSLARVLARIGHCRHPMPGRQ
LGSRQVHLHSYGSHVVTTRALARFTRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39393; Mature: 39262

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHH
EVYEDTERNILLKILKPSARVLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDN
HHHHHHHHHEEHEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHC
FRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKIVGHTIEVESVKFSHILDRHR
CCCCCCCHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCC
PDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH
CCEEEEECCCCCCCEEECCCCCCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSD
HHHHHHHHHHHHHCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RSLARVLARIGHCRHPMPGRQLGSRQVHLHSYGSHVVTTRALARFTRA
HHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARAPRQVVSWLGYMTTRIIRSLRKRFRRAFKPRTVSIFGVKLIAADERVPPYLQDLMYR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHH
EVYEDTERNILLKILKPSARVLEIGTGVGFIAALAAAICGQDNVSTYEANSSLASLIRDN
HHHHHHHHHEEHEEECCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEECHHHHHHHHHHC
FRLNQLEPHLVLKAVTSDGRTVSFHQAENVISSSIFDRKIVGHTIEVESVKFSHILDRHR
CCCCCCCHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCC
PDVLIMDVEGAEDELLRIPGFGSVQHIPVELQPHIIGRDKVDELKRIVELRGFRQRFSDH
CCEEEEECCCCCCCEEECCCCCCCEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LSARRIRTINALRAAPPLAMDAGLKILAPDAVFATMAQACQGVRDQLRRHENLHPRWNSD
HHHHHHHHHHHHHCCCCCHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RSLARVLARIGHCRHPMPGRQLGSRQVHLHSYGSHVVTTRALARFTRA
HHHHHHHHHHHCCCCCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA