Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

Click here to switch to the map view.

The map label for this gene is 150395595

Identifier: 150395595

GI number: 150395595

Start: 394667

End: 395449

Strand: Direct

Name: 150395595

Synonym: Smed_0370

Alternate gene names: NA

Gene position: 394667-395449 (Clockwise)

Preceding gene: 150395593

Following gene: 150395596

Centisome position: 10.44

GC content: 57.98

Gene sequence:

>783_bases
ATGACCACCAGGACCATATTGGCCACCGCCGCAGCCATAGCCGCAATATCCACCGCAGTGCCTGCGAACGCTGCGTACAC
CATCCCTGCTAACCAGGCCGTGAAGAACATAGTCCTCGTTCACGGTGCTTTCGCCGATGGTTCGGGCTGGAGGGGCGTCT
ACGACAATCTCACGAAGCGTGGATATCGTGTCACCATCGTCCAGAATCCGTTGACCTCCCTCGAAGACGATGTTGCCGCC
ACCAAGCGTGCGCTTGAGCGGCAAGATGGTCCCGCCATTCTGGTAGGCCATTCATGGGGTGGGACAGTCATTACGGAAGC
CGGCATTGATATGAAGGTCGCGGGACTGGTTTACGTCTCCGCGCTGTCACCGGACGCAGGCGAGACGTCGGCCCAGCAGT
ATGAAGGTTTTGCCCCTGCAACGGAATTCGTCATCGAGACCACAAAAGATGGTTTTGGTTATGTCAGCCCCGAAAAATTC
AAGGCTGGATTTGCGCATGACGCCAGCGACAACGACGTCGCGTTCATGCGGGATTCGCAGGTCCCCATCAACATGTCGGC
GTTCGGCACGATCCTGGAGAACGCTGCTTGGCGGACCAAGCCAAGCTGGGCTGTCATCGCCACGGAAGACAAGGCATTCG
ACCAAGCCATGCTGATCCATATGGCAGAGCGGATTAAAGCCAAGATCACCAAAGTCTCAGCAAGCCACGCGCTGCTCATG
ACGCAGCCGACGGTGGTCGCGGACACCATCGACGAGGCCGCGAAAACTGTTTCGGCGCAGTAA

Upstream 100 bases:

>100_bases
AAACAATATCGCGATAAATGATGTTGACACAAAAAATGAAATCTGGCAGCTAATAGATATCGCAATAACAATTATCGCGC
GTCAGCAAGAGGAGAAAGTC

Downstream 100 bases:

>100_bases
GGATGATCATTCGAGTTTTATCATCGGGACAGGCATCCCCTGTTCGATGATTGCATGCTGGAACGTCTCACCTCCCACTA
CGCTCGACACTGCAGCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase Protein; Signal Peptide Protein; Alpha/Beta Hydrolase Fold; Esterase/Lipase/Thioesterase Domain-Containing Protein; Hydrolases Or Acyltransferases; Hydrolase; Hydrolase Or Acyltransferase; Alpha/Beta Hydrolase; Esterase; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Alpha/Beta Hydrolase Family Protein; Polyneuridine-Aldehyde Esterase; Lipase; Conserved Protein; Alpha/Beta Hydrolase Fold Containing Protein; Extracytoplasmic Hydrolase

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTTRTILATAAAIAAISTAVPANAAYTIPANQAVKNIVLVHGAFADGSGWRGVYDNLTKRGYRVTIVQNPLTSLEDDVAA
TKRALERQDGPAILVGHSWGGTVITEAGIDMKVAGLVYVSALSPDAGETSAQQYEGFAPATEFVIETTKDGFGYVSPEKF
KAGFAHDASDNDVAFMRDSQVPINMSAFGTILENAAWRTKPSWAVIATEDKAFDQAMLIHMAERIKAKITKVSASHALLM
TQPTVVADTIDEAAKTVSAQ

Sequences:

>Translated_260_residues
MTTRTILATAAAIAAISTAVPANAAYTIPANQAVKNIVLVHGAFADGSGWRGVYDNLTKRGYRVTIVQNPLTSLEDDVAA
TKRALERQDGPAILVGHSWGGTVITEAGIDMKVAGLVYVSALSPDAGETSAQQYEGFAPATEFVIETTKDGFGYVSPEKF
KAGFAHDASDNDVAFMRDSQVPINMSAFGTILENAAWRTKPSWAVIATEDKAFDQAMLIHMAERIKAKITKVSASHALLM
TQPTVVADTIDEAAKTVSAQ
>Mature_259_residues
TTRTILATAAAIAAISTAVPANAAYTIPANQAVKNIVLVHGAFADGSGWRGVYDNLTKRGYRVTIVQNPLTSLEDDVAAT
KRALERQDGPAILVGHSWGGTVITEAGIDMKVAGLVYVSALSPDAGETSAQQYEGFAPATEFVIETTKDGFGYVSPEKFK
AGFAHDASDNDVAFMRDSQVPINMSAFGTILENAAWRTKPSWAVIATEDKAFDQAMLIHMAERIKAKITKVSASHALLMT
QPTVVADTIDEAAKTVSAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27576; Mature: 27445

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRTILATAAAIAAISTAVPANAAYTIPANQAVKNIVLVHGAFADGSGWRGVYDNLTKR
CCCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHEEEEEEEEECCCCCCCHHHHHHHCC
GYRVTIVQNPLTSLEDDVAATKRALERQDGPAILVGHSWGGTVITEAGIDMKVAGLVYVS
CEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEE
ALSPDAGETSAQQYEGFAPATEFVIETTKDGFGYVSPEKFKAGFAHDASDNDVAFMRDSQ
ECCCCCCCCCHHHHCCCCCHHHEEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCC
VPINMSAFGTILENAAWRTKPSWAVIATEDKAFDQAMLIHMAERIKAKITKVSASHALLM
CCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCEEEE
TQPTVVADTIDEAAKTVSAQ
ECCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TTRTILATAAAIAAISTAVPANAAYTIPANQAVKNIVLVHGAFADGSGWRGVYDNLTKR
CCHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHEEEEEEEEECCCCCCCHHHHHHHCC
GYRVTIVQNPLTSLEDDVAATKRALERQDGPAILVGHSWGGTVITEAGIDMKVAGLVYVS
CEEEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCCEEEEEEEEEE
ALSPDAGETSAQQYEGFAPATEFVIETTKDGFGYVSPEKFKAGFAHDASDNDVAFMRDSQ
ECCCCCCCCCHHHHCCCCCHHHEEEEECCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCC
VPINMSAFGTILENAAWRTKPSWAVIATEDKAFDQAMLIHMAERIKAKITKVSASHALLM
CCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHEECCCCEEEE
TQPTVVADTIDEAAKTVSAQ
ECCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA