| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395588
Identifier: 150395588
GI number: 150395588
Start: 386374
End: 387873
Strand: Direct
Name: 150395588
Synonym: Smed_0363
Alternate gene names: NA
Gene position: 386374-387873 (Clockwise)
Preceding gene: 150395587
Following gene: 150395589
Centisome position: 10.22
GC content: 60.2
Gene sequence:
>1500_bases ATGGATACATTTTCGTTTTTGATCGATGGGTTCGCACTGGCTATTCAGCCTGCGAACCTCATCTACGCCGCCATTGGCGT TCTTATTGGAACGGCCGTCGGTGTTCTCCCAGGTATTGGCCCGGCACTGACGGTGGCACTTCTGCTTCCAGTTACCTTCA AGCTGGATCCCGGCGGCTCGATCATCATGTTCGCCGGAATTTACTATGGCGGAATGTACGGTGGTTCGACCACGGCGATC CTGCTCAACGCGCCTGGCGAAAGCGCATCGGTCGTCACCGCGCTCGAGGGCAACAAGATGGCACGAGCCGGACGCGGTGG GCCGGCGCTCGCGACAGCAGCCATCGGTTCGTTCGTTGCCGCACTCGTTGCTACAGCCGGGCTGGCCGTTCTCGCACCGT ATCTCGTGAAGATTGCTGTCAAGTTCGGTCCCTGGGATTATTTCGGTCTGATGCTGATCGCGTTCGTGACGGTATCGGCA ACGTTCGGGTCATCGCCGCTGCGGGGGCTCACCAGTCTGGCCTTTGGCCTCTGGCTGGGACTGATGGGCATCGACCAGTT GACGGGCCAGGCTCGCCTGACGTTCGGTGTTCCGGGACTGCTTGATGGCGTCGAGGTGACAACGCTCGCCGTCGGTCTGT TCGCGATCGGTGAAGCCTTCTTCGTGGCGTCGCGTCATCTCTACAAGCCCGAGAAGCCTATCCCGGTTAAGGGGTCGATC TGGATGACCAGAGAAGACTGGAAGCGGTCCTGGAAGCCATGGCTTCGCGGTACGGTCATCGGCTTTCCGATCGGCGCACT TCCGGCTGGCGGCGCCGAGATTCCTACTTTCCTGAGCTATACGATCGAACGCAAGCTGAGCAGCAAGCCGGAAGAGTTCG GCCGCGGGGCAATCGAAGGCGTCGCCGGTCCGGAAGCTGCGAACAATGCGTCCGCCGCCGGCACGCTGGTTCCGCTGCTG ACGCTTGGATTACCGACGTCTGCCACGGCCGCCGTCATGCTCGCGGGCTTCCAGCAGTACAACATCCAGCCGGGTCCCTT GCTGTTCACGCAGCATGCTGACCTCGTCTGGGGACTGGTCGCCAGCCTGTTTATCGCCAATGTCATGCTGCTTGTTCTCA ACCTGCCTTTGGTCGGAATTTGGGTGAAGCTCCTCAAAATTCCGCTGCCCTGGCTCTATGCAGGCATCCTCGTGTTTGCT TCGATGGGCACCCTTGCAGCGAACCCATCCGTGACGGAACTGCTGCTGCTGACGGGATTCGGCGTCGTCGGATTTGTGAT GCGCCGCTACGACTATCCCATCGCTCCGGCGGTTGTCGGTCTGATCCTTGGCCCGCTTGCAGACAGCGCCTTGCGCCGCT CTCTGCAAATGAGCCTTGGCGATCCGATGATCCTGGTCCAGCATCCGAGTTCGGCCATCATGATCGGCATAGCCGTTGTT GCCTTGGTCGCTCCTTTTGTATTCAGAGGCCTCGCGAAATTCCGTCAAGACGAGGATTGA
Upstream 100 bases:
>100_bases GGGGCGGTCATCGGGGTGTTTGTCTTCCTTCTCTTCAATAAGCTCCTGACGCTCGCGTTGCCGCAAGGCCCGCTTGAGCG GCTCTTCTGAGGACGCCCTG
Downstream 100 bases:
>100_bases TGGCGCAAATCTGTTTGACCGCGCCGGGCGGCGCACATCACTGTGGCAATTCCAACTGAAAGAACAGGACACACGGACAA GGCATGGCCAGGAACAGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGSIIMFAGIYYGGMYGGSTTAI LLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVAALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSA TFGSSPLRGLTSLAFGLWLGLMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEGVAGPEAANNASAAGTLVPLL TLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLVASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFA SMGTLAANPSVTELLLLTGFGVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV ALVAPFVFRGLAKFRQDED
Sequences:
>Translated_499_residues MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGSIIMFAGIYYGGMYGGSTTAI LLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVAALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSA TFGSSPLRGLTSLAFGLWLGLMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEGVAGPEAANNASAAGTLVPLL TLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLVASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFA SMGTLAANPSVTELLLLTGFGVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV ALVAPFVFRGLAKFRQDED >Mature_499_residues MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGSIIMFAGIYYGGMYGGSTTAI LLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVAALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSA TFGSSPLRGLTSLAFGLWLGLMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEGVAGPEAANNASAAGTLVPLL TLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLVASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFA SMGTLAANPSVTELLLLTGFGVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV ALVAPFVFRGLAKFRQDED
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52137; Mature: 52137
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGS CCHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCC IIMFAGIYYGGMYGGSTTAILLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVA EEEEEHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHH ALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSATFGSSPLRGLTSLAFGLWLG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI HHHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEG EEEHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHCC VAGPEAANNASAAGTLVPLLTLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLV CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH ASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFASMGTLAANPSVTELLLLTGF HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH GVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH ALVAPFVFRGLAKFRQDED HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDTFSFLIDGFALAIQPANLIYAAIGVLIGTAVGVLPGIGPALTVALLLPVTFKLDPGGS CCHHHHHHHCHHHEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCC IIMFAGIYYGGMYGGSTTAILLNAPGESASVVTALEGNKMARAGRGGPALATAAIGSFVA EEEEEHHHHCCCCCCCEEEEEEECCCCCCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHH ALVATAGLAVLAPYLVKIAVKFGPWDYFGLMLIAFVTVSATFGSSPLRGLTSLAFGLWLG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMGIDQLTGQARLTFGVPGLLDGVEVTTLAVGLFAIGEAFFVASRHLYKPEKPIPVKGSI HHHHHHHCCCEEEEECCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE WMTREDWKRSWKPWLRGTVIGFPIGALPAGGAEIPTFLSYTIERKLSSKPEEFGRGAIEG EEEHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCHHCC VAGPEAANNASAAGTLVPLLTLGLPTSATAAVMLAGFQQYNIQPGPLLFTQHADLVWGLV CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH ASLFIANVMLLVLNLPLVGIWVKLLKIPLPWLYAGILVFASMGTLAANPSVTELLLLTGF HHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH GVVGFVMRRYDYPIAPAVVGLILGPLADSALRRSLQMSLGDPMILVQHPSSAIMIGIAVV HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH ALVAPFVFRGLAKFRQDED HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]