Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is yggG [H]

Identifier: 150395552

GI number: 150395552

Start: 355699

End: 356760

Strand: Direct

Name: yggG [H]

Synonym: Smed_0326

Alternate gene names: 150395552

Gene position: 355699-356760 (Clockwise)

Preceding gene: 150395551

Following gene: 150395554

Centisome position: 9.41

GC content: 65.16

Gene sequence:

>1062_bases
TTGGCTTCTGACGGCCCCGCGATTGCCTCTGGGGAGTGGTACCCGCCGGGATCGGGCCGCTCGATCATCGCAAGCCTTGC
CGAACGCGGCGGACGTTTGATCGTGCGCGATGAGAGCGGTGGCGAGCTTGCGGGGAGCATGCTGCCCTCGATCGAGATAT
CGTCACGGGTGGGCCGTGTTGCGCGCCGGATCACCTTTCCGGACGGATCGACGTTCGAGACTGCCGAAAACGACGCGATC
GACCGGTTCCTGGCCGGGAAGGGCCGCGTCCGGGAGGGGATTGTCCATCGGCTGGAGCGCTTCCATCCGCGGCTGATCGC
TTTTGTCGCGGCCACGATCCTGCTCGGCGTGCTGATTTATCGCTTCGCACTGCCGCTGATGGTGGAGGTTGCCGTCGCCT
TCACGCCGCCGGTCGTGCCGCGCATCATGTCGGCGAGCACGCTGGAAACGATGGATCGGACGCTGCTCGGGGATTCGAAG
CTCGACGAAGCCCGGCGCGGCCGGATCGTCGAGGGGTTCCGTCGCGTCGCGGCGCTCTCCGGCAGAGGGGAGGCGGGCTA
CACGCTGAACTTCCGCGAGGGCGGTCCGCTCGGCCCGAATGCTTTTGCCCTGCCCGACGGAACGTTGATCCTCACCGACG
AACTGGTGGATCTCGCAGGCGAAGATACCGAAATGATCGTCGGTGTGCTGGCTCATGAGATCGGTCACGTGGAGCACGAG
CACAGCCTGCGCCAGATCTATCGTGCTGCCGGGCTTACCGCCCTTATCATGCTGGTTGCGGGCGATATCGGTTCGGGAGC
GGAGGACGTCCTGGTCCAGGGCGGCGGTCTTCTCGCGCTTTCCTATTCGCGATCCGCCGAAGCCGAAGCGGACAGGCATT
CGGTCGAGCTGATGTTGAAGGCAGGCCTCGATCCGGGCGGGCTCGGCCGCTTCTTCCAACTGCTCGAAACAAAGCTGGAC
GACCGCTCCGAGACGAGCATCCTTTCCACCCACCCCGGAACGCCCGAGCGGCGCAAGGCGATCGCCGATTGGATTGGCAA
GGCAAGGAAGCGGCTTGAATAG

Upstream 100 bases:

>100_bases
GGCATCCGCTTCGAGGGTGACGTCGGCGAGATCTTCTCGCAGATCGACCAGGAAGGTTCGGCGGTCGGCGCCGAGTTCAT
GGATATAGAAGGCTTCGACT

Downstream 100 bases:

>100_bases
CAGCGTGCAGAGCTCGCCGGGACAAAACGAAAACAGCGGGCATGGGCCCGCTGTCTCTCGTTCGTCAGTTCAGTCGGGTC
AATCCTGCGGACCTTCGTTG

Product: peptidase M48 Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MASDGPAIASGEWYPPGSGRSIIASLAERGGRLIVRDESGGELAGSMLPSIEISSRVGRVARRITFPDGSTFETAENDAI
DRFLAGKGRVREGIVHRLERFHPRLIAFVAATILLGVLIYRFALPLMVEVAVAFTPPVVPRIMSASTLETMDRTLLGDSK
LDEARRGRIVEGFRRVAALSGRGEAGYTLNFREGGPLGPNAFALPDGTLILTDELVDLAGEDTEMIVGVLAHEIGHVEHE
HSLRQIYRAAGLTALIMLVAGDIGSGAEDVLVQGGGLLALSYSRSAEAEADRHSVELMLKAGLDPGGLGRFFQLLETKLD
DRSETSILSTHPGTPERRKAIADWIGKARKRLE

Sequences:

>Translated_353_residues
MASDGPAIASGEWYPPGSGRSIIASLAERGGRLIVRDESGGELAGSMLPSIEISSRVGRVARRITFPDGSTFETAENDAI
DRFLAGKGRVREGIVHRLERFHPRLIAFVAATILLGVLIYRFALPLMVEVAVAFTPPVVPRIMSASTLETMDRTLLGDSK
LDEARRGRIVEGFRRVAALSGRGEAGYTLNFREGGPLGPNAFALPDGTLILTDELVDLAGEDTEMIVGVLAHEIGHVEHE
HSLRQIYRAAGLTALIMLVAGDIGSGAEDVLVQGGGLLALSYSRSAEAEADRHSVELMLKAGLDPGGLGRFFQLLETKLD
DRSETSILSTHPGTPERRKAIADWIGKARKRLE
>Mature_352_residues
ASDGPAIASGEWYPPGSGRSIIASLAERGGRLIVRDESGGELAGSMLPSIEISSRVGRVARRITFPDGSTFETAENDAID
RFLAGKGRVREGIVHRLERFHPRLIAFVAATILLGVLIYRFALPLMVEVAVAFTPPVVPRIMSASTLETMDRTLLGDSKL
DEARRGRIVEGFRRVAALSGRGEAGYTLNFREGGPLGPNAFALPDGTLILTDELVDLAGEDTEMIVGVLAHEIGHVEHEH
SLRQIYRAAGLTALIMLVAGDIGSGAEDVLVQGGGLLALSYSRSAEAEADRHSVELMLKAGLDPGGLGRFFQLLETKLDD
RSETSILSTHPGTPERRKAIADWIGKARKRLE

Specific function: Seems to regulate the expression of speB [H]

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

Organism=Escherichia coli, GI87082185, Length=248, Percent_Identity=26.6129032258064, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87081800, Length=179, Percent_Identity=29.0502793296089, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 37924; Mature: 37793

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDGPAIASGEWYPPGSGRSIIASLAERGGRLIVRDESGGELAGSMLPSIEISSRVGRV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHH
ARRITFPDGSTFETAENDAIDRFLAGKGRVREGIVHRLERFHPRLIAFVAATILLGVLIY
HHHEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFALPLMVEVAVAFTPPVVPRIMSASTLETMDRTLLGDSKLDEARRGRIVEGFRRVAALS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHC
GRGEAGYTLNFREGGPLGPNAFALPDGTLILTDELVDLAGEDTEMIVGVLAHEIGHVEHE
CCCCCCEEEEECCCCCCCCCCEECCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHCHHHH
HSLRQIYRAAGLTALIMLVAGDIGSGAEDVLVQGGGLLALSYSRSAEAEADRHSVELMLK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHC
AGLDPGGLGRFFQLLETKLDDRSETSILSTHPGTPERRKAIADWIGKARKRLE
CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASDGPAIASGEWYPPGSGRSIIASLAERGGRLIVRDESGGELAGSMLPSIEISSRVGRV
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCHHHHHHHHH
ARRITFPDGSTFETAENDAIDRFLAGKGRVREGIVHRLERFHPRLIAFVAATILLGVLIY
HHHEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFALPLMVEVAVAFTPPVVPRIMSASTLETMDRTLLGDSKLDEARRGRIVEGFRRVAALS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHC
GRGEAGYTLNFREGGPLGPNAFALPDGTLILTDELVDLAGEDTEMIVGVLAHEIGHVEHE
CCCCCCEEEEECCCCCCCCCCEECCCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHCHHHH
HSLRQIYRAAGLTALIMLVAGDIGSGAEDVLVQGGGLLALSYSRSAEAEADRHSVELMLK
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEECCCEEEEECCCCCCCHHHHHHHHHHHC
AGLDPGGLGRFFQLLETKLDDRSETSILSTHPGTPERRKAIADWIGKARKRLE
CCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2153656; 9278503; 1310091 [H]