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The map label for this gene is flbT [H]

Identifier: 150395507

GI number: 150395507

Start: 300446

End: 300895

Strand: Direct

Name: flbT [H]

Synonym: Smed_0280

Alternate gene names: 150395507

Gene position: 300446-300895 (Clockwise)

Preceding gene: 150395506

Following gene: 150395508

Centisome position: 7.94

GC content: 58.67

Gene sequence:

>450_bases
ATGAAGAGCACACTGCGTATTTCGCTGAAATCGGGCGAGAGGATCTTCGTAAACGGCGCAGTGCTTCGCGTCGACCGCAA
GGTTGCGATCGAATTCCTGAACGACGTGACGTTCCTGCTGGAGAACCACGTTTTGCAGCCCGAAGATGCGACGACACCGC
TCAGGCAGCTCTACTTCATCGCCCAGATGATCCTGATCAATCCGGAAGGCGCGGACCAGTCGACCTCGATGTTCCGCAAG
TCGATCGTCATGCTGGTCAACTGCTTCAGGAACGATGAGGTGCTTGCCGAGCTGAAGCGCATCGACGGGCTGGTCACGCA
GGGACGCGCCTTCGAGGCGCTGAAAGCGATTCGGGCGCTTTACCCGATCGAGGACCAGATCCTCAACGCGCAGGAGATGA
CGCCTGCGACGGTGGAACAGATACGCAAGGAGATCGCGCCATGGCGGTAA

Upstream 100 bases:

>100_bases
GGATCTGGATTCTGAACGAGACGGAAAAAATCCGCAAACGCGAATCTTCCAACTTCCAAGGCATAATAGACATCACCACC
ATCATCAGGGATGGACTGAA

Downstream 100 bases:

>100_bases
GCGGCGTCAACAACACGTCCAACAGCTACACGCCCATTGTTTCAGGCACGGAATCGGCCGGCGATGCGAGTGCGGCGACG
CTCAACTACGAGAGCTTCCT

Product: flagellar biosynthesis repressor FlbT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKSTLRISLKSGERIFVNGAVLRVDRKVAIEFLNDVTFLLENHVLQPEDATTPLRQLYFIAQMILINPEGADQSTSMFRK
SIVMLVNCFRNDEVLAELKRIDGLVTQGRAFEALKAIRALYPIEDQILNAQEMTPATVEQIRKEIAPWR

Sequences:

>Translated_149_residues
MKSTLRISLKSGERIFVNGAVLRVDRKVAIEFLNDVTFLLENHVLQPEDATTPLRQLYFIAQMILINPEGADQSTSMFRK
SIVMLVNCFRNDEVLAELKRIDGLVTQGRAFEALKAIRALYPIEDQILNAQEMTPATVEQIRKEIAPWR
>Mature_149_residues
MKSTLRISLKSGERIFVNGAVLRVDRKVAIEFLNDVTFLLENHVLQPEDATTPLRQLYFIAQMILINPEGADQSTSMFRK
SIVMLVNCFRNDEVLAELKRIDGLVTQGRAFEALKAIRALYPIEDQILNAQEMTPATVEQIRKEIAPWR

Specific function: Has a post-transcriptional repressor function in flagellum biogenesis. Associates with the 5'-UTR of fljK mRNA and promotes its degradation [H]

COG id: COG5443

COG function: function code N; Flagellar biosynthesis regulator FlbT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flbT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009967
- InterPro:   IPR016006 [H]

Pfam domain/function: PF07378 FlbT [H]

EC number: NA

Molecular weight: Translated: 17016; Mature: 17016

Theoretical pI: Translated: 7.37; Mature: 7.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTLRISLKSGERIFVNGAVLRVDRKVAIEFLNDVTFLLENHVLQPEDATTPLRQLYFI
CCCEEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AQMILINPEGADQSTSMFRKSIVMLVNCFRNDEVLAELKRIDGLVTQGRAFEALKAIRAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YPIEDQILNAQEMTPATVEQIRKEIAPWR
CCHHHHHCCHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSTLRISLKSGERIFVNGAVLRVDRKVAIEFLNDVTFLLENHVLQPEDATTPLRQLYFI
CCCEEEEEECCCCEEEECCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
AQMILINPEGADQSTSMFRKSIVMLVNCFRNDEVLAELKRIDGLVTQGRAFEALKAIRAL
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YPIEDQILNAQEMTPATVEQIRKEIAPWR
CCHHHHHCCHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]