Click here to switch to the map view.

The map label for this gene is flaF

Identifier: 150395506

GI number: 150395506

Start: 300102

End: 300449

Strand: Direct

Name: flaF

Synonym: Smed_0279

Alternate gene names: NA

Gene position: 300102-300449 (Clockwise)

Preceding gene: 150395505

Following gene: 150395507

Centisome position: 7.94

GC content: 52.59

Gene sequence:

>348_bases
ATGTATCAGTTTGCATACGCCGAGATCATGGAGGAAGGCGTAGCCGTTTCCAAGGATCGGGAGAAGCAGGTTCTCGATCG
TTCCATCGCGCTCTTGCAGGCGGCGAAGGAAAAGAACGGATACACCCGAGAGGCGATCGAAGCGGTTTATTTCACCCGGC
GCCTCTGGATACGGTTCATCGAAGATTTGCGTGCGCCGGACAATCAGCTCAACGAAGAGCTGCGCGCCAACCTCATCTCG
ATCGGGATCTGGATTCTGAACGAGACGGAAAAAATCCGCAAACGCGAATCTTCCAACTTCCAAGGCATAATAGACATCAC
CACCATCATCAGGGATGGACTGAAATGA

Upstream 100 bases:

>100_bases
GTAGAGACCTCCTACACTCTGACGTCGCGGATCCAGCGGTTGAGTTTGATAGACTTCCTCTGATGACTAGAGGATACGGA
CAAGCATGAGGGACGTCTGA

Downstream 100 bases:

>100_bases
AGAGCACACTGCGTATTTCGCTGAAATCGGGCGAGAGGATCTTCGTAAACGGCGCAGTGCTTCGCGTCGACCGCAAGGTT
GCGATCGAATTCCTGAACGA

Product: flagellar biosynthesis regulatory protein FlaF

Products: NA

Alternate protein names: Flagellar Protein FlaF; Flagellar FlaF Family Protein; Flagellar FlaF; Flagellin Synthesis Regulator Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MYQFAYAEIMEEGVAVSKDREKQVLDRSIALLQAAKEKNGYTREAIEAVYFTRRLWIRFIEDLRAPDNQLNEELRANLIS
IGIWILNETEKIRKRESSNFQGIIDITTIIRDGLK

Sequences:

>Translated_115_residues
MYQFAYAEIMEEGVAVSKDREKQVLDRSIALLQAAKEKNGYTREAIEAVYFTRRLWIRFIEDLRAPDNQLNEELRANLIS
IGIWILNETEKIRKRESSNFQGIIDITTIIRDGLK
>Mature_115_residues
MYQFAYAEIMEEGVAVSKDREKQVLDRSIALLQAAKEKNGYTREAIEAVYFTRRLWIRFIEDLRAPDNQLNEELRANLIS
IGIWILNETEKIRKRESSNFQGIIDITTIIRDGLK

Specific function: Unknown

COG id: COG5442

COG function: function code N; Flagellar biosynthesis regulator FlaF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13464; Mature: 13464

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQFAYAEIMEEGVAVSKDREKQVLDRSIALLQAAKEKNGYTREAIEAVYFTRRLWIRFI
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EDLRAPDNQLNEELRANLISIGIWILNETEKIRKRESSNFQGIIDITTIIRDGLK
HHHCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MYQFAYAEIMEEGVAVSKDREKQVLDRSIALLQAAKEKNGYTREAIEAVYFTRRLWIRFI
CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EDLRAPDNQLNEELRANLISIGIWILNETEKIRKRESSNFQGIIDITTIIRDGLK
HHHCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA