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The map label for this gene is flgD [C]

Identifier: 150395508

GI number: 150395508

Start: 300886

End: 301302

Strand: Direct

Name: flgD [C]

Synonym: Smed_0281

Alternate gene names: 150395508

Gene position: 300886-301302 (Clockwise)

Preceding gene: 150395507

Following gene: 150395509

Centisome position: 7.96

GC content: 59.95

Gene sequence:

>417_bases
ATGGCGGTAAGCGGCGTCAACAACACGTCCAACAGCTACACGCCCATTGTTTCAGGCACGGAATCGGCCGGCGATGCGAG
TGCGGCGACGCTCAACTACGAGAGCTTCCTCAAGCTGCTCGTGGCGCAGATGAAGAACCAGGATCCCACCCAGCCGATGG
ACGCAACGCAGCAGATCGCGCAGCTTGCGACCTTCTCCCAGGTGGAGCAGACGATCAAGACCAACAAGAACCTGGAGAGC
CTGCTGCAGCGCACGTCGCTCAGCGAGGCGGATGCGGTGATCGGCAGGACTGTCACCAGCGCTGACGGCAAGACCACTGG
TGTCGTCAAGGAGGTGAAACTATACTCCGACGGAATCATCGCAGTGCTCGATACGGGCAAGGAGCTCGTCATCGGTCCGG
GCGTTAAAGTGAAGTGA

Upstream 100 bases:

>100_bases
TGAAAGCGATTCGGGCGCTTTACCCGATCGAGGACCAGATCCTCAACGCGCAGGAGATGACGCCTGCGACGGTGGAACAG
ATACGCAAGGAGATCGCGCC

Downstream 100 bases:

>100_bases
GTTCCCATGAATGAGGCAGATGCCCTCGACATCGTACAGGCGGCGATCTGGACCGTGATCGTGGCCTCGGGGCCTGCCGT
TCTCGCCGCAATGGTGGTCG

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: Flagellar Hook Capping Protein; FlgD Protein; Flagellar Basal-Body Rod Protein; Flagellar Basal-Body Rod Protein

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MAVSGVNNTSNSYTPIVSGTESAGDASAATLNYESFLKLLVAQMKNQDPTQPMDATQQIAQLATFSQVEQTIKTNKNLES
LLQRTSLSEADAVIGRTVTSADGKTTGVVKEVKLYSDGIIAVLDTGKELVIGPGVKVK

Sequences:

>Translated_138_residues
MAVSGVNNTSNSYTPIVSGTESAGDASAATLNYESFLKLLVAQMKNQDPTQPMDATQQIAQLATFSQVEQTIKTNKNLES
LLQRTSLSEADAVIGRTVTSADGKTTGVVKEVKLYSDGIIAVLDTGKELVIGPGVKVK
>Mature_137_residues
AVSGVNNTSNSYTPIVSGTESAGDASAATLNYESFLKLLVAQMKNQDPTQPMDATQQIAQLATFSQVEQTIKTNKNLESL
LQRTSLSEADAVIGRTVTSADGKTTGVVKEVKLYSDGIIAVLDTGKELVIGPGVKVK

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14521; Mature: 14389

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSGVNNTSNSYTPIVSGTESAGDASAATLNYESFLKLLVAQMKNQDPTQPMDATQQIA
CCCCCCCCCCCCCCCEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHH
QLATFSQVEQTIKTNKNLESLLQRTSLSEADAVIGRTVTSADGKTTGVVKEVKLYSDGII
HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHEECCCCEE
AVLDTGKELVIGPGVKVK
EEEECCCEEEECCCCCCC
>Mature Secondary Structure 
AVSGVNNTSNSYTPIVSGTESAGDASAATLNYESFLKLLVAQMKNQDPTQPMDATQQIA
CCCCCCCCCCCCCCEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHH
QLATFSQVEQTIKTNKNLESLLQRTSLSEADAVIGRTVTSADGKTTGVVKEVKLYSDGII
HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHEECCCCEE
AVLDTGKELVIGPGVKVK
EEEECCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA