| Definition | Sinorhizobium medicae WSM419 chromosome, complete genome. |
|---|---|
| Accession | NC_009636 |
| Length | 3,781,904 |
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The map label for this gene is 150395490
Identifier: 150395490
GI number: 150395490
Start: 282992
End: 283483
Strand: Direct
Name: 150395490
Synonym: Smed_0263
Alternate gene names: NA
Gene position: 282992-283483 (Clockwise)
Preceding gene: 150395489
Following gene: 150395491
Centisome position: 7.48
GC content: 62.2
Gene sequence:
>492_bases ATGGAAGAAATCGAGAGCAAAGAAACGAAATCGCCTTCGCGGGTGATGACCATCGCGGCGGTGGCGGCGCTGACGCTCGT CGCCGGCGGTGGCGGCTGGCTCGCAGGCATGCTCCTGGCACCGCCCGCGGCCGAGAAGACGGAAGCCGCGGTCGAGCTTC CGGCGAATGCGACCGGCGAGGAGGAAATAGCCAGGATCGCAACGGTCGCGAACGGCATCGTGCAGCTCGATCCCATTACG ACGAACCTTGCCTATCCAGCCGAAAACTGGGTTCGCCTCGAAGTCGCTCTTCAGTTCAACGGCGTTCCCGACGTTGCGTT GGCGGAGACGATACACCAGGACATTGCAGCCTACCTCAAGACCGTGTCGCTGCAGCAGGTTCAAGGGCCGCGCGGCTTCC AATATCTCCGGGATGACATTCAGGAGCGGGTTGACCTGCGCTCCGAGGGCCGCGTAACGAGTGTGATGTTCCGCACCTTC GTCATCCAATGA
Upstream 100 bases:
>100_bases TCCTATGGCGGCCGCGGCCGCCTGACGGAAGTCCAGCAGCCGCCATGGGGACAGCAGCTCGTCGACCTCGTCTCGCCCCT CTGATCGGCCGGAACGCACA
Downstream 100 bases:
>100_bases TTCGCTGATGCTCCGGTTCGCCACGTTCATAATCGCCATGATGGCGATGTCGGGAATTGCCGGGGCTCAAGGGTTTCCGG CCGATATCCTGAATACGCCG
Product: flagellar basal body-associated protein FliL
Products: NA
Alternate protein names: Flagellar Protein; Flagellar Transmembrane Protein; Flagellar Basal Body-Associated Protein; Flagellar Biosynthesis Transmembrane Protein; FliL Flagella Related Protein
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MEEIESKETKSPSRVMTIAAVAALTLVAGGGGWLAGMLLAPPAAEKTEAAVELPANATGEEEIARIATVANGIVQLDPIT TNLAYPAENWVRLEVALQFNGVPDVALAETIHQDIAAYLKTVSLQQVQGPRGFQYLRDDIQERVDLRSEGRVTSVMFRTF VIQ
Sequences:
>Translated_163_residues MEEIESKETKSPSRVMTIAAVAALTLVAGGGGWLAGMLLAPPAAEKTEAAVELPANATGEEEIARIATVANGIVQLDPIT TNLAYPAENWVRLEVALQFNGVPDVALAETIHQDIAAYLKTVSLQQVQGPRGFQYLRDDIQERVDLRSEGRVTSVMFRTF VIQ >Mature_163_residues MEEIESKETKSPSRVMTIAAVAALTLVAGGGGWLAGMLLAPPAAEKTEAAVELPANATGEEEIARIATVANGIVQLDPIT TNLAYPAENWVRLEVALQFNGVPDVALAETIHQDIAAYLKTVSLQQVQGPRGFQYLRDDIQERVDLRSEGRVTSVMFRTF VIQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17590; Mature: 17590
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEIESKETKSPSRVMTIAAVAALTLVAGGGGWLAGMLLAPPAAEKTEAAVELPANATGE CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCH EEIARIATVANGIVQLDPITTNLAYPAENWVRLEVALQFNGVPDVALAETIHQDIAAYLK HHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH TVSLQQVQGPRGFQYLRDDIQERVDLRSEGRVTSVMFRTFVIQ HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MEEIESKETKSPSRVMTIAAVAALTLVAGGGGWLAGMLLAPPAAEKTEAAVELPANATGE CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCCH EEIARIATVANGIVQLDPITTNLAYPAENWVRLEVALQFNGVPDVALAETIHQDIAAYLK HHHHHHHHHHCCCEEECCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHH TVSLQQVQGPRGFQYLRDDIQERVDLRSEGRVTSVMFRTFVIQ HHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA