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The map label for this gene is fliP [H]

Identifier: 150395491

GI number: 150395491

Start: 283491

End: 284228

Strand: Direct

Name: fliP [H]

Synonym: Smed_0264

Alternate gene names: 150395491

Gene position: 283491-284228 (Clockwise)

Preceding gene: 150395490

Following gene: 150395492

Centisome position: 7.5

GC content: 59.49

Gene sequence:

>738_bases
ATGCTCCGGTTCGCCACGTTCATAATCGCCATGATGGCGATGTCGGGAATTGCCGGGGCTCAAGGGTTTCCGGCCGATAT
CCTGAATACGCCGGTCGATGGCTCCGTCGCCTCATGGATCATCCGCACCTTCGGCCTGCTGACCGTTCTTTCGGTCGCTC
CCGGCATCCTGATCATGGTGACGAGCTTCCCACGCTTCGTGATCGCCTTCGCGATCCTGCGCTCAGGCATGGGGCTTGCG
ACGACCCCCTCCAACATGATCATGGTGTCGCTCGCTTTGTTCATGACCTTCTACGTCATGGCGCCCACCTTCGACCGCGC
CTGGCGCGACGGCATCGATCCGCTTCTGAAAAACGAGATCTCCGAAACGGAGGCAATGCAGCGGATGTCCGAACCTTTCC
GCGAATTCATGCTGGCCAACACCCGCGACAAGGACCTGCAGCTGTTCATCGACATTGCCCAGGAAAAGGGCCAGACCGTC
GTCGTGGACGAGAAGGTGGACCTGCGCGCCGTCGTTCCGGCCTTCATGATCTCGGAAATCCGTCGCGGCTTCGAGATCGG
CTTCCTGATCATGCTGCCCTTCCTTGTGATCGACCTGATCGTCGCGACGATCACCATGGCTATGGGCATGATGATGCTTC
CCCCGACGGCGATTTCGCTGCCCTTCAAAATCCTGTTTTTCGTGCTGATCGACGGCTGGAACCTGCTCGTCGGCAGCCTC
GTGCGGTCCTTCATCTGA

Upstream 100 bases:

>100_bases
CAATATCTCCGGGATGACATTCAGGAGCGGGTTGACCTGCGCTCCGAGGGCCGCGTAACGAGTGTGATGTTCCGCACCTT
CGTCATCCAATGATTCGCTG

Downstream 100 bases:

>100_bases
GGCTGCGGAGGCACATTTCCCGTCCTCGCAGGACTTCGTTAAGCATAGGATTTTACAGGAGATTAACCACATCTTCGCCG
GGGCCGCACGCGCCTTCTCC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLRFATFIIAMMAMSGIAGAQGFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFAILRSGMGLA
TTPSNMIMVSLALFMTFYVMAPTFDRAWRDGIDPLLKNEISETEAMQRMSEPFREFMLANTRDKDLQLFIDIAQEKGQTV
VVDEKVDLRAVVPAFMISEIRRGFEIGFLIMLPFLVIDLIVATITMAMGMMMLPPTAISLPFKILFFVLIDGWNLLVGSL
VRSFI

Sequences:

>Translated_245_residues
MLRFATFIIAMMAMSGIAGAQGFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFAILRSGMGLA
TTPSNMIMVSLALFMTFYVMAPTFDRAWRDGIDPLLKNEISETEAMQRMSEPFREFMLANTRDKDLQLFIDIAQEKGQTV
VVDEKVDLRAVVPAFMISEIRRGFEIGFLIMLPFLVIDLIVATITMAMGMMMLPPTAISLPFKILFFVLIDGWNLLVGSL
VRSFI
>Mature_245_residues
MLRFATFIIAMMAMSGIAGAQGFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMVTSFPRFVIAFAILRSGMGLA
TTPSNMIMVSLALFMTFYVMAPTFDRAWRDGIDPLLKNEISETEAMQRMSEPFREFMLANTRDKDLQLFIDIAQEKGQTV
VVDEKVDLRAVVPAFMISEIRRGFEIGFLIMLPFLVIDLIVATITMAMGMMMLPPTAISLPFKILFFVLIDGWNLLVGSL
VRSFI

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=220, Percent_Identity=44.0909090909091, Blast_Score=202, Evalue=2e-53,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 27179; Mature: 27179

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFATFIIAMMAMSGIAGAQGFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMV
CHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHH
TSFPRFVIAFAILRSGMGLATTPSNMIMVSLALFMTFYVMAPTFDRAWRDGIDPLLKNEI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH
SETEAMQRMSEPFREFMLANTRDKDLQLFIDIAQEKGQTVVVDEKVDLRAVVPAFMISEI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH
RRGFEIGFLIMLPFLVIDLIVATITMAMGMMMLPPTAISLPFKILFFVLIDGWNLLVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRSFI
HHHHC
>Mature Secondary Structure
MLRFATFIIAMMAMSGIAGAQGFPADILNTPVDGSVASWIIRTFGLLTVLSVAPGILIMV
CHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEHH
TSFPRFVIAFAILRSGMGLATTPSNMIMVSLALFMTFYVMAPTFDRAWRDGIDPLLKNEI
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHH
SETEAMQRMSEPFREFMLANTRDKDLQLFIDIAQEKGQTVVVDEKVDLRAVVPAFMISEI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHH
RRGFEIGFLIMLPFLVIDLIVATITMAMGMMMLPPTAISLPFKILFFVLIDGWNLLVGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VRSFI
HHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7828930; 11481430; 2921241; 8282695 [H]