Definition Sinorhizobium medicae WSM419 chromosome, complete genome.
Accession NC_009636
Length 3,781,904

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The map label for this gene is pstS [H]

Identifier: 150395347

GI number: 150395347

Start: 132831

End: 133865

Strand: Direct

Name: pstS [H]

Synonym: Smed_0119

Alternate gene names: 150395347

Gene position: 132831-133865 (Clockwise)

Preceding gene: 150395346

Following gene: 150395348

Centisome position: 3.51

GC content: 59.32

Gene sequence:

>1035_bases
ATGAAAGCTCTTAAATTTACCGCAGCGGCGTTGGTTGCCTCCGCCGCTTTTGCGGGCGTTGCAGCGGCTCGCGACCAGAT
CCAGGTGGCCGGCTCCTCGACCGTTCTTCCCTATGCAAAGATCGTTGCCGAAAACTTCGGCGAGACATTCCCTGACTTCA
AAACGCCCGTAATCGAGTCCGGCGGTTCGTCGGCCGGCCTGAAGGAATTCTGCAAGGGCGTTGGTGAAGACACGATCGAT
ATCGCCAATTCGTCGCGCAAGATCAAAGACAGCGAAGTCGAGGCCTGCAAAGCTGCCGGCGTGACCGAGATCCAGGAAGT
GAAGATCGGCTATGACGGCATCGTCTTCGCCACCGATGCCGGCAATGCCGACCTGACTCTGAAGCCGGAGCACCTCTACA
AGGCGCTTGCCGCCGAAATCGTCGTCGATGGGAAGCTCGTCGCGAATCCCTACAAGAAGTGGTCGGAAGTCGACGCTTCG
CTGCCGGACGCCGAAATTGCTGCCTATATTCCGGGCGAGAAGCATGGAACGCGCGAAGTCTTCGAAGAGAAGATCCTCGC
TGCCGGCTGCAAGGACTCCGGCGCTCAGGACGTCATCAAGGCGGCCGTGAGCGATGAAAAGCAGCAGCACAGCAAGTGCG
TGGCCGTACGCAAGGACGGCATGGCCGTGGACATCGACGGCGACTACACCGAGACGCTGGCGCGCATCGCTTCGAACAAG
AACGGCATCGGCGTCTTCGGCCTTTCGTTCTTCGAAAATAACGCCGACAAGCTGAAGGTTGCGACGGTCAACGGCGTTGT
TCCTTCGACGGAAACGATCGCTTCCGGCGAGTATCCGGTTTCCCGTCCGCTTTTCTTCTACGTCAAGAAGGCCCATATCG
GCGTTATTCCCGGCCTCAAGGAATATGTCGAGTTCTTCGTTGACGATCAGATGATCGGCCCCGACAGCCCGCTCGCCGAA
TACGGCCTCGTCGCCGCTCCGGACGCCGAGCGCGAAGAAATCCGCCAGTCCTTCGAGGCAGGCAACCTGCTCTGA

Upstream 100 bases:

>100_bases
AAGCTGTAGCCATCGGCGGCTAACTAGGGGCGCCGCAGAAACGGCGAGAGAGCGCTGAACCCTGGCGCACCCAACACAAG
CCCATTCCGGGAGAACACTT

Downstream 100 bases:

>100_bases
TCATGGCTGGGCTCCGGCGCCACTCTTGCGCCGGAGCCGCATTCTTCCGAACTTGACTGGCGGCTTGTGACGAGCCTGTC
GCGGAGACGTGCCGATGAGT

Product: putative phosphate-binding periplasmic protein

Products: NA

Alternate protein names: PBP [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MKALKFTAAALVASAAFAGVAAARDQIQVAGSSTVLPYAKIVAENFGETFPDFKTPVIESGGSSAGLKEFCKGVGEDTID
IANSSRKIKDSEVEACKAAGVTEIQEVKIGYDGIVFATDAGNADLTLKPEHLYKALAAEIVVDGKLVANPYKKWSEVDAS
LPDAEIAAYIPGEKHGTREVFEEKILAAGCKDSGAQDVIKAAVSDEKQQHSKCVAVRKDGMAVDIDGDYTETLARIASNK
NGIGVFGLSFFENNADKLKVATVNGVVPSTETIASGEYPVSRPLFFYVKKAHIGVIPGLKEYVEFFVDDQMIGPDSPLAE
YGLVAAPDAEREEIRQSFEAGNLL

Sequences:

>Translated_344_residues
MKALKFTAAALVASAAFAGVAAARDQIQVAGSSTVLPYAKIVAENFGETFPDFKTPVIESGGSSAGLKEFCKGVGEDTID
IANSSRKIKDSEVEACKAAGVTEIQEVKIGYDGIVFATDAGNADLTLKPEHLYKALAAEIVVDGKLVANPYKKWSEVDAS
LPDAEIAAYIPGEKHGTREVFEEKILAAGCKDSGAQDVIKAAVSDEKQQHSKCVAVRKDGMAVDIDGDYTETLARIASNK
NGIGVFGLSFFENNADKLKVATVNGVVPSTETIASGEYPVSRPLFFYVKKAHIGVIPGLKEYVEFFVDDQMIGPDSPLAE
YGLVAAPDAEREEIRQSFEAGNLL
>Mature_344_residues
MKALKFTAAALVASAAFAGVAAARDQIQVAGSSTVLPYAKIVAENFGETFPDFKTPVIESGGSSAGLKEFCKGVGEDTID
IANSSRKIKDSEVEACKAAGVTEIQEVKIGYDGIVFATDAGNADLTLKPEHLYKALAAEIVVDGKLVANPYKKWSEVDAS
LPDAEIAAYIPGEKHGTREVFEEKILAAGCKDSGAQDVIKAAVSDEKQQHSKCVAVRKDGMAVDIDGDYTETLARIASNK
NGIGVFGLSFFENNADKLKVATVNGVVPSTETIASGEYPVSRPLFFYVKKAHIGVIPGLKEYVEFFVDDQMIGPDSPLAE
YGLVAAPDAEREEIRQSFEAGNLL

Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]

COG id: COG0226

COG function: function code P; ABC-type phosphate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pstS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011862 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36536; Mature: 36536

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALKFTAAALVASAAFAGVAAARDQIQVAGSSTVLPYAKIVAENFGETFPDFKTPVIES
CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCC
GGSSAGLKEFCKGVGEDTIDIANSSRKIKDSEVEACKAAGVTEIQEVKIGYDGIVFATDA
CCCCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHEEECCCCEEEEECC
GNADLTLKPEHLYKALAAEIVVDGKLVANPYKKWSEVDASLPDAEIAAYIPGEKHGTREV
CCCCEEECHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHH
FEEKILAAGCKDSGAQDVIKAAVSDEKQQHSKCVAVRKDGMAVDIDGDYTETLARIASNK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHCCC
NGIGVFGLSFFENNADKLKVATVNGVVPSTETIASGEYPVSRPLFFYVKKAHIGVIPGLK
CCEEEEEEHHHCCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCEEEEEHHHCCCCCCHH
EYVEFFVDDQMIGPDSPLAEYGLVAAPDAEREEIRQSFEAGNLL
HHHHHHHCCCCCCCCCCHHHCCEEECCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKALKFTAAALVASAAFAGVAAARDQIQVAGSSTVLPYAKIVAENFGETFPDFKTPVIES
CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCCCCCHHCC
GGSSAGLKEFCKGVGEDTIDIANSSRKIKDSEVEACKAAGVTEIQEVKIGYDGIVFATDA
CCCCCCHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHEEECCCCEEEEECC
GNADLTLKPEHLYKALAAEIVVDGKLVANPYKKWSEVDASLPDAEIAAYIPGEKHGTREV
CCCCEEECHHHHHHHHHHHHHCCCEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHH
FEEKILAAGCKDSGAQDVIKAAVSDEKQQHSKCVAVRKDGMAVDIDGDYTETLARIASNK
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHHHHHCCC
NGIGVFGLSFFENNADKLKVATVNGVVPSTETIASGEYPVSRPLFFYVKKAHIGVIPGLK
CCEEEEEEHHHCCCCCEEEEEEECCCCCCCHHCCCCCCCCCCCCEEEEEHHHCCCCCCHH
EYVEFFVDDQMIGPDSPLAEYGLVAAPDAEREEIRQSFEAGNLL
HHHHHHHCCCCCCCCCCHHHCCEEECCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA