| Definition | Clostridium acetobutylicum ATCC 824 plasmid pSOL1, complete sequence. |
|---|---|
| Accession | NC_001988 |
| Length | 192,000 |
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Identifier: 15004730
GI number: 15004730
Start: 26782
End: 27360
Strand: Direct
Name: Not Available
Synonym: CA_P0026
Alternate gene names: NA
Gene position: 26782-27360 (Clockwise)
Preceding gene: 15004729
Following gene: 15004731
Centisome position: 13.95
GC content: 27.98
Gene sequence:
>579_bases ATGGGTATAAAGTCAGTAAGTCCAATAAAAGCATGTAATAAGGCTTTTTATTCTAAGGATGAAAAGAATTCAAAAGATAG CTTCTATAACAAACTAAAGAAAACTATAAATACTAATGAAGATGAAAATATATTGGAGGAGATAAATAGCGAGCCTACTG AGGATAAGGAAGAAGATCTTTTGTTATATCGGGTTTTAAAAAAGGATGGTTTTAAGCTTAAAGGCCATTCATTTAGCTGG GTAAGAGAAAATTGTAATTTAGTAATCTTTCCTCCTATTACAGCTCCAGGACACTTAAGAAAACAATTTAAAGACTATAT TAGTACTTTGAATTTAAAAGATAAAGAAAAAAATGATATTGGCTTTTCAATAGTTGCACAGTATGCACTCTATATTAAAG AAAATCCTAAGGAAACTATGAAAGCCTATAGTAATGAGGCTATGAGTAAATTGATTTTAAATCTACTGGAGTATAATGAA AAATACAAAAAAAGGACTGATAAACTTTCTATTATAAGATATGAAAATACAAGGCTTGTATTAAATAGGCTTCTTGATTA TATTAATACTAAGCATTAG
Upstream 100 bases:
>100_bases CAGAATATTCTTACTGAATCTATCTATAGCCTATTATATTTTTTAATTAAACTACGATTATCTATATTAGTAGTTAAATG GAATTTATGGAGGCGAAAGT
Downstream 100 bases:
>100_bases GGTTAGAATTTAATATTAACCCTAATACATAATATTAGCATAATCAAGAAGCTTTTATATTTATTAAAAAAGGAACAAGG TAAGTCCCAAAATAAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MGIKSVSPIKACNKAFYSKDEKNSKDSFYNKLKKTINTNEDENILEEINSEPTEDKEEDLLLYRVLKKDGFKLKGHSFSW VRENCNLVIFPPITAPGHLRKQFKDYISTLNLKDKEKNDIGFSIVAQYALYIKENPKETMKAYSNEAMSKLILNLLEYNE KYKKRTDKLSIIRYENTRLVLNRLLDYINTKH
Sequences:
>Translated_192_residues MGIKSVSPIKACNKAFYSKDEKNSKDSFYNKLKKTINTNEDENILEEINSEPTEDKEEDLLLYRVLKKDGFKLKGHSFSW VRENCNLVIFPPITAPGHLRKQFKDYISTLNLKDKEKNDIGFSIVAQYALYIKENPKETMKAYSNEAMSKLILNLLEYNE KYKKRTDKLSIIRYENTRLVLNRLLDYINTKH >Mature_191_residues GIKSVSPIKACNKAFYSKDEKNSKDSFYNKLKKTINTNEDENILEEINSEPTEDKEEDLLLYRVLKKDGFKLKGHSFSWV RENCNLVIFPPITAPGHLRKQFKDYISTLNLKDKEKNDIGFSIVAQYALYIKENPKETMKAYSNEAMSKLILNLLEYNEK YKKRTDKLSIIRYENTRLVLNRLLDYINTKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22570; Mature: 22439
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKSVSPIKACNKAFYSKDEKNSKDSFYNKLKKTINTNEDENILEEINSEPTEDKEEDL CCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHH LLYRVLKKDGFKLKGHSFSWVRENCNLVIFPPITAPGHLRKQFKDYISTLNLKDKEKNDI HHHHHHHHCCCEECCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC GFSIVAQYALYIKENPKETMKAYSNEAMSKLILNLLEYNEKYKKRTDKLSIIRYENTRLV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH LNRLLDYINTKH HHHHHHHHCCCC >Mature Secondary Structure GIKSVSPIKACNKAFYSKDEKNSKDSFYNKLKKTINTNEDENILEEINSEPTEDKEEDL CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHH LLYRVLKKDGFKLKGHSFSWVRENCNLVIFPPITAPGHLRKQFKDYISTLNLKDKEKNDI HHHHHHHHCCCEECCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC GFSIVAQYALYIKENPKETMKAYSNEAMSKLILNLLEYNEKYKKRTDKLSIIRYENTRLV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHH LNRLLDYINTKH HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA