| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is wecB [C]
Identifier: 150010396
GI number: 150010396
Start: 4669057
End: 4670217
Strand: Direct
Name: wecB [C]
Synonym: BDI_3833
Alternate gene names: 150010396
Gene position: 4669057-4670217 (Clockwise)
Preceding gene: 150010395
Following gene: 150010397
Centisome position: 97.04
GC content: 44.27
Gene sequence:
>1161_bases ATGGCAACATTTAAGAATAATGGGAAATTAAAATTGCTGATCATCGTTGGTACTCGTCCGGAGATTATCCGGTTGGCAGC TGTTATTAATAAGTGCAGAAAATATTTTGACGTGGTATTGGCTCATACGGGTCAGAACTATGATTACAATTTGAACGGGA TCTTTTTCAAGGATCTGAAGTTGGCGGATCCAGAGGTTTATCTGGATACCGTAGGGGATGATCTTGGTGCTACAATGGGT AACATAATCGATAAGAGTTATAAGTTGATGGTTGAGTTAAAACCGGATGCTGTACTTGTGCTGGGTGATACCAACTCATG CTTGAGTGTAATAGGAGCGAAGCGTTTACATATCCCTATCTTCCACATGGAGGCTGGTAATCGTTGTTTCGATGAGTGCC TTCCAGAGGAAACAAACCGCCGTATAGTGGATATCATATCAGACGTGAATATTTGCTACAGCGAGCATGCTCGCCGCTAT TTGAATGCCGCAGGTACTCCTAAGGAGCGTACTTATGTGGTAGGTTCTCCAATGGCTGAAGTCTTGCATAATAATTTGGA GCGGATCAAGGCTAGTGATGTGCTAAGCCGATTGGGATTGGAGAAAGGCAAGTATATCCTTCTTTCTGCTCATCGGGAGG AGAATATCGATACGAAGGCTAATTTCTTTAACTTGATGAACGCAGTGAACGCTATGGCAGAGAAGTACGATTTACCGATC TTGTATTCTTGTCATCCTCGTTCTAAGAAATATATTGAGCAACGGGGTTTCCGGTTCGATCCTCGTGTGATTCAACATCA GCCCTTAGGCTTTCATGACTACAATCATCTTCAGATAAACGCTTTTGCGGTCGTATCTGATTCCGGAACGCTTCCGGAGG AGAGCAGTTTTTTCCTGTCTATTGGCAATCCGATCCCTGCGGTATGTATTCGCACAAGTACGGAACGTCCAGAGGCATTG GACAAAGGAAACTTTATCTTGGCTGGCATCACGACGGAGCAGGTACTGCAAGCGGTGGATGTGGCTGTTGAGATGAACCG AGATGGAGCGTTGGGCTTTCCGGTTCCTAACTATATGGATGAGAATGTCTCGGTAAAGGTGGTGAAACTGATTCAGAGTT ATACCGGGGTGGTAGATAAAATGGTTTGGAGAAAAGAATAA
Upstream 100 bases:
>100_bases TCTCCGATACGGAGGATCTGGTAACGGTAATGTGGGCGAATGAGAGTTTTGATTTGAACCACCCGGATACCTATTTTGAA CCTGTTAAAAAAGAATAGTG
Downstream 100 bases:
>100_bases AGGTTTATAAGAATTTGGAGTGTATTAGTCGTGAATTTGATTATAACAAGGCTATGGAGAAATGAACCATAGATGGTTGA ATGGATATAAAGAGGTTGTT
Product: putative UDP-N-acetylglucosamine 2-epimerase
Products: UDP-N-acetyl-D-mannosamine
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MATFKNNGKLKLLIIVGTRPEIIRLAAVINKCRKYFDVVLAHTGQNYDYNLNGIFFKDLKLADPEVYLDTVGDDLGATMG NIIDKSYKLMVELKPDAVLVLGDTNSCLSVIGAKRLHIPIFHMEAGNRCFDECLPEETNRRIVDIISDVNICYSEHARRY LNAAGTPKERTYVVGSPMAEVLHNNLERIKASDVLSRLGLEKGKYILLSAHREENIDTKANFFNLMNAVNAMAEKYDLPI LYSCHPRSKKYIEQRGFRFDPRVIQHQPLGFHDYNHLQINAFAVVSDSGTLPEESSFFLSIGNPIPAVCIRTSTERPEAL DKGNFILAGITTEQVLQAVDVAVEMNRDGALGFPVPNYMDENVSVKVVKLIQSYTGVVDKMVWRKE
Sequences:
>Translated_386_residues MATFKNNGKLKLLIIVGTRPEIIRLAAVINKCRKYFDVVLAHTGQNYDYNLNGIFFKDLKLADPEVYLDTVGDDLGATMG NIIDKSYKLMVELKPDAVLVLGDTNSCLSVIGAKRLHIPIFHMEAGNRCFDECLPEETNRRIVDIISDVNICYSEHARRY LNAAGTPKERTYVVGSPMAEVLHNNLERIKASDVLSRLGLEKGKYILLSAHREENIDTKANFFNLMNAVNAMAEKYDLPI LYSCHPRSKKYIEQRGFRFDPRVIQHQPLGFHDYNHLQINAFAVVSDSGTLPEESSFFLSIGNPIPAVCIRTSTERPEAL DKGNFILAGITTEQVLQAVDVAVEMNRDGALGFPVPNYMDENVSVKVVKLIQSYTGVVDKMVWRKE >Mature_385_residues ATFKNNGKLKLLIIVGTRPEIIRLAAVINKCRKYFDVVLAHTGQNYDYNLNGIFFKDLKLADPEVYLDTVGDDLGATMGN IIDKSYKLMVELKPDAVLVLGDTNSCLSVIGAKRLHIPIFHMEAGNRCFDECLPEETNRRIVDIISDVNICYSEHARRYL NAAGTPKERTYVVGSPMAEVLHNNLERIKASDVLSRLGLEKGKYILLSAHREENIDTKANFFNLMNAVNAMAEKYDLPIL YSCHPRSKKYIEQRGFRFDPRVIQHQPLGFHDYNHLQINAFAVVSDSGTLPEESSFFLSIGNPIPAVCIRTSTERPEALD KGNFILAGITTEQVLQAVDVAVEMNRDGALGFPVPNYMDENVSVKVVKLIQSYTGVVDKMVWRKE
Specific function: Catalyzes The Reversible Epimerization At C-2 Of UDP-N- Acetylglucosamine (UDP-Glcnac) And Thereby Provides Bacteria With UDP-N-Acetylmannosamine (UDP-Mannac), The Activated Donor Of Mannac Residues. Also Involved In Bacteriophage N4 Adsorption. [C]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=345, Percent_Identity=26.9565217391304, Blast_Score=95, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: 5.1.3.14
Molecular weight: Translated: 43403; Mature: 43271
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFKNNGKLKLLIIVGTRPEIIRLAAVINKCRKYFDVVLAHTGQNYDYNLNGIFFKDLK CCEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCEEEEEEEE LADPEVYLDTVGDDLGATMGNIIDKSYKLMVELKPDAVLVLGDTNSCLSVIGAKRLHIPI ECCCCEEEECCCCHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHHCCCEEEEEE FHMEAGNRCFDECLPEETNRRIVDIISDVNICYSEHARRYLNAAGTPKERTYVVGSPMAE EEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHH VLHNNLERIKASDVLSRLGLEKGKYILLSAHREENIDTKANFFNLMNAVNAMAEKYDLPI HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE LYSCHPRSKKYIEQRGFRFDPRVIQHQPLGFHDYNHLQINAFAVVSDSGTLPEESSFFLS EEECCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE IGNPIPAVCIRTSTERPEALDKGNFILAGITTEQVLQAVDVAVEMNRDGALGFPVPNYMD ECCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCCC ENVSVKVVKLIQSYTGVVDKMVWRKE CCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATFKNNGKLKLLIIVGTRPEIIRLAAVINKCRKYFDVVLAHTGQNYDYNLNGIFFKDLK CEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEECCCEEEEEEEE LADPEVYLDTVGDDLGATMGNIIDKSYKLMVELKPDAVLVLGDTNSCLSVIGAKRLHIPI ECCCCEEEECCCCHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHHCCCEEEEEE FHMEAGNRCFDECLPEETNRRIVDIISDVNICYSEHARRYLNAAGTPKERTYVVGSPMAE EEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHH VLHNNLERIKASDVLSRLGLEKGKYILLSAHREENIDTKANFFNLMNAVNAMAEKYDLPI HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE LYSCHPRSKKYIEQRGFRFDPRVIQHQPLGFHDYNHLQINAFAVVSDSGTLPEESSFFLS EEECCCCHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCEEEE IGNPIPAVCIRTSTERPEALDKGNFILAGITTEQVLQAVDVAVEMNRDGALGFPVPNYMD ECCCCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCCCCC ENVSVKVVKLIQSYTGVVDKMVWRKE CCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: UDP-N-acetylglucosamine [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.63 {UDP-N-acetylglucosamine}} 1 {UDP-N-acetylmannosamine}} 0.5 {UDP-N-acetylmannosamine}} [C]
Substrates: UDP-N-acetyl-D-glucosamine
Specific reaction: UDP-N-acetyl-D-glucosamine = UDP-N-acetyl-D-mannosamine
General reaction: Epimerization [C]
Inhibitor: PCMB [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA