Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150010351

Identifier: 150010351

GI number: 150010351

Start: 4614631

End: 4616061

Strand: Direct

Name: 150010351

Synonym: BDI_3785

Alternate gene names: NA

Gene position: 4614631-4616061 (Clockwise)

Preceding gene: 150010350

Following gene: 150010352

Centisome position: 95.91

GC content: 45.63

Gene sequence:

>1431_bases
ATGAAAATACCTGTTTTTATACTCTCAATATCTTTATACCTTTCTTCCTGCTCTTTCACCCCCCGTGCCGAGTGGGTAAC
GACAACCGAGAATACCCCTTGGGCTGAGCAACCCGATCTGATCTCCGCCCTTGCGGATACGATACCTAATATTGATATAA
CAATTCTAACAGAAAAGCATCAACAACAAATTGATGGTTTCGGAGCCTGTTTTAATGAATTAGGTTGGCTTTCCTTGAGT
AAGCTGGAGCCAAGTGTACGTGAGGAAATCATGGAAGAGCTTTTTTTCCCCGGAGTCGGAGCCAACTTCACGATTTGCCG
GATGCCTGTAGGAGCAAATGATTTCTCCCGTGATTGGTATTCGTATGACGAGGTAGACGGTGATTTCACAATGGAACATT
TTACCATCGCCAATGACCAACAAACGTTGATTCCTTTTATCAAGAACGCTCGGAAGTATCAGCCAGACTTACGCTTGTGG
GCTTCCCCGTGGTGCCCTCCCGCTTGGATGAAATATAACAAACACTATGCCTCTGCCTATACGGGTGAGAATTATGACGA
GAAGTATCGAAATGGTTTGTCGGCCGATAAGGTCGGCCATGAAGGTACGGATATGTTTATCCAAGACTCTCTTTACCTGA
AAGCCTATGCCCTCTATTTCTCTAAATTTATCGAGGCCTATAAGAAACACGGAATTCCAATCTTTGCCATAATGCCCCAG
AACGAGTTCAACTCTGCGCAAATATTCCCGAGTTGTTGTTGGACATCGGCTTCTTTGGCTAATTTTATCGGTAATTATCT
CGGGCCGGCCATGCAGGTTCAAGGAGTGGATATTATGTTCGGCACGATGGAACGTGCGAATGAGTCGCTTGTTGATACGG
TATTGACAGATCCCGCTAGTGGTAAATATGTAAAAGGTGTCGGTTTCCAATGGGCGGGTAAGGGAGCTATCGCCGGAATC
CACAAACGTTATCCCGGGTTGAAGCTTTACCAAACCGAGCAAGAATGTGGAGATGGCAAGAACGATTGGAAGGGTGCCAT
GTATTCTTGGGGGTTGATGCGACATTTTCTGGATAATGGCGTTTCTGCCTATATGTATTGGAATATATCTTTGGAAAATG
GAGGGATCAGTCGTTGGGGATGGGCGCAAAACTCATTGGTTGTCGTAGATCCGCAAACCAAGAGCTATCGATATACTCCG
GAATACTACGTGATGAAACATGTCAGCCATTATGTCCAGCCCGGTGCATATAAATTAGAAACGGAAGGAGCCTATACGAA
TCTGCTGGCATTCCGTAACCCGGATAACAGTATCGCCTTGATTATCGCCAATGAGACCAGTGATGATCGTTCCCTTTCCA
TCCGCATAGGCGATCGAGTCTATACTCCGATCGTAAAAGCATATTCCATGAATACGCTGCTGGTCGATTGA

Upstream 100 bases:

>100_bases
CTACACGGATGACACGGTATTTGTATTTATCCGTGTGTTCCGTGTCATCCGTGTAGTCCGTGTTTAAATGGTTCTAAACT
TATAAATTAATGAAACGACC

Downstream 100 bases:

>100_bases
TAATCCTTTTGAGAGATGCAAAAAGACAAGTTGTCAGTTATCTCTTCGGATATTTGTCTATTTCGTCCGAAATATTGTCA
GTCGAACTCGGGTGAATACG

Product: beta-glycosidase

Products: D-glucose; N-acylsphingosine

Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; O-Glycosyl Hydrolase Family Protein; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glycosy Hydrolase Family Protein; Glucan EndO-1 6-Beta-Glucosidase; Beta-Glycosidase; Glycosyl Hydrolase Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase; Glucuronoarabinoxylan Endo-1 4-Beta-Xylanase

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKHQQQIDGFGACFNELGWLSLS
KLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWYSYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLW
ASPWCPPAWMKYNKHYASAYTGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ
NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPASGKYVKGVGFQWAGKGAIAGI
HKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNGVSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTP
EYYVMKHVSHYVQPGAYKLETEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD

Sequences:

>Translated_476_residues
MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKHQQQIDGFGACFNELGWLSLS
KLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWYSYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLW
ASPWCPPAWMKYNKHYASAYTGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ
NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPASGKYVKGVGFQWAGKGAIAGI
HKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNGVSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTP
EYYVMKHVSHYVQPGAYKLETEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD
>Mature_476_residues
MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKHQQQIDGFGACFNELGWLSLS
KLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWYSYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLW
ASPWCPPAWMKYNKHYASAYTGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ
NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPASGKYVKGVGFQWAGKGAIAGI
HKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNGVSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTP
EYYVMKHVSHYVQPGAYKLETEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD

Specific function: Unknown

COG id: COG5520

COG function: function code M; O-Glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI54607043, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI54607045, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI54607047, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=5e-32,
Organism=Homo sapiens, GI284807150, Length=433, Percent_Identity=25.4041570438799, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI284807152, Length=388, Percent_Identity=26.0309278350515, Blast_Score=122, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI115532470, Length=448, Percent_Identity=29.2410714285714, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI115532472, Length=448, Percent_Identity=29.2410714285714, Blast_Score=172, Evalue=5e-43,
Organism=Caenorhabditis elegans, GI17542884, Length=471, Percent_Identity=27.8131634819533, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI193204210, Length=450, Percent_Identity=25.5555555555556, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17539758, Length=397, Percent_Identity=26.7002518891688, Blast_Score=138, Evalue=7e-33,
Organism=Caenorhabditis elegans, GI17539756, Length=396, Percent_Identity=26.7676767676768, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI25151335, Length=386, Percent_Identity=26.9430051813472, Blast_Score=130, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.45

Molecular weight: Translated: 53999; Mature: 53999

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKH
CCCEEEEEEEEHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECHH
QQQIDGFGACFNELGWLSLSKLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWY
HHHHHHHHHHHHHHCCEEHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
SYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLWASPWCPPAWMKYNKHYASAY
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCHHHCCC
TGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ
CCCCHHHHHHCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPAS
CCCCCCEECHHHHCCHHHHHHHHHHHCCCCEEECCEEEEECCHHHHHHHHHHHHHCCCCC
GKYVKGVGFQWAGKGAIAGIHKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNG
CCEEECCCEEECCCCCEEHHHHCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHCC
VSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTPEYYVMKHVSHYVQPGAYKLE
CEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHCCCCEEEE
TEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD
CCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKH
CCCEEEEEEEEHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECHH
QQQIDGFGACFNELGWLSLSKLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWY
HHHHHHHHHHHHHHCCEEHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC
SYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLWASPWCPPAWMKYNKHYASAY
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCHHHCCC
TGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ
CCCCHHHHHHCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPAS
CCCCCCEECHHHHCCHHHHHHHHHHHCCCCEEECCEEEEECCHHHHHHHHHHHHHCCCCC
GKYVKGVGFQWAGKGAIAGIHKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNG
CCEEECCCEEECCCCCEEHHHHCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHCC
VSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTPEYYVMKHVSHYVQPGAYKLE
CEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHCCCCEEEE
TEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD
CCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-glucosyl-N-acylsphingosine; H2O

Specific reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA