| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150010351
Identifier: 150010351
GI number: 150010351
Start: 4614631
End: 4616061
Strand: Direct
Name: 150010351
Synonym: BDI_3785
Alternate gene names: NA
Gene position: 4614631-4616061 (Clockwise)
Preceding gene: 150010350
Following gene: 150010352
Centisome position: 95.91
GC content: 45.63
Gene sequence:
>1431_bases ATGAAAATACCTGTTTTTATACTCTCAATATCTTTATACCTTTCTTCCTGCTCTTTCACCCCCCGTGCCGAGTGGGTAAC GACAACCGAGAATACCCCTTGGGCTGAGCAACCCGATCTGATCTCCGCCCTTGCGGATACGATACCTAATATTGATATAA CAATTCTAACAGAAAAGCATCAACAACAAATTGATGGTTTCGGAGCCTGTTTTAATGAATTAGGTTGGCTTTCCTTGAGT AAGCTGGAGCCAAGTGTACGTGAGGAAATCATGGAAGAGCTTTTTTTCCCCGGAGTCGGAGCCAACTTCACGATTTGCCG GATGCCTGTAGGAGCAAATGATTTCTCCCGTGATTGGTATTCGTATGACGAGGTAGACGGTGATTTCACAATGGAACATT TTACCATCGCCAATGACCAACAAACGTTGATTCCTTTTATCAAGAACGCTCGGAAGTATCAGCCAGACTTACGCTTGTGG GCTTCCCCGTGGTGCCCTCCCGCTTGGATGAAATATAACAAACACTATGCCTCTGCCTATACGGGTGAGAATTATGACGA GAAGTATCGAAATGGTTTGTCGGCCGATAAGGTCGGCCATGAAGGTACGGATATGTTTATCCAAGACTCTCTTTACCTGA AAGCCTATGCCCTCTATTTCTCTAAATTTATCGAGGCCTATAAGAAACACGGAATTCCAATCTTTGCCATAATGCCCCAG AACGAGTTCAACTCTGCGCAAATATTCCCGAGTTGTTGTTGGACATCGGCTTCTTTGGCTAATTTTATCGGTAATTATCT CGGGCCGGCCATGCAGGTTCAAGGAGTGGATATTATGTTCGGCACGATGGAACGTGCGAATGAGTCGCTTGTTGATACGG TATTGACAGATCCCGCTAGTGGTAAATATGTAAAAGGTGTCGGTTTCCAATGGGCGGGTAAGGGAGCTATCGCCGGAATC CACAAACGTTATCCCGGGTTGAAGCTTTACCAAACCGAGCAAGAATGTGGAGATGGCAAGAACGATTGGAAGGGTGCCAT GTATTCTTGGGGGTTGATGCGACATTTTCTGGATAATGGCGTTTCTGCCTATATGTATTGGAATATATCTTTGGAAAATG GAGGGATCAGTCGTTGGGGATGGGCGCAAAACTCATTGGTTGTCGTAGATCCGCAAACCAAGAGCTATCGATATACTCCG GAATACTACGTGATGAAACATGTCAGCCATTATGTCCAGCCCGGTGCATATAAATTAGAAACGGAAGGAGCCTATACGAA TCTGCTGGCATTCCGTAACCCGGATAACAGTATCGCCTTGATTATCGCCAATGAGACCAGTGATGATCGTTCCCTTTCCA TCCGCATAGGCGATCGAGTCTATACTCCGATCGTAAAAGCATATTCCATGAATACGCTGCTGGTCGATTGA
Upstream 100 bases:
>100_bases CTACACGGATGACACGGTATTTGTATTTATCCGTGTGTTCCGTGTCATCCGTGTAGTCCGTGTTTAAATGGTTCTAAACT TATAAATTAATGAAACGACC
Downstream 100 bases:
>100_bases TAATCCTTTTGAGAGATGCAAAAAGACAAGTTGTCAGTTATCTCTTCGGATATTTGTCTATTTCGTCCGAAATATTGTCA GTCGAACTCGGGTGAATACG
Product: beta-glycosidase
Products: D-glucose; N-acylsphingosine
Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; O-Glycosyl Hydrolase Family Protein; Glycoside Hydrolase; Lysosomal Glucosyl Ceramidase-Like Protein; Glycosy Hydrolase Family Protein; Glucan EndO-1 6-Beta-Glucosidase; Beta-Glycosidase; Glycosyl Hydrolase Family; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Endo-1 6-Beta-D-Glucanase; Glucuronoarabinoxylan Endo-1 4-Beta-Xylanase
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKHQQQIDGFGACFNELGWLSLS KLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWYSYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLW ASPWCPPAWMKYNKHYASAYTGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPASGKYVKGVGFQWAGKGAIAGI HKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNGVSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTP EYYVMKHVSHYVQPGAYKLETEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD
Sequences:
>Translated_476_residues MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKHQQQIDGFGACFNELGWLSLS KLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWYSYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLW ASPWCPPAWMKYNKHYASAYTGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPASGKYVKGVGFQWAGKGAIAGI HKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNGVSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTP EYYVMKHVSHYVQPGAYKLETEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD >Mature_476_residues MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKHQQQIDGFGACFNELGWLSLS KLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWYSYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLW ASPWCPPAWMKYNKHYASAYTGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPASGKYVKGVGFQWAGKGAIAGI HKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNGVSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTP EYYVMKHVSHYVQPGAYKLETEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD
Specific function: Unknown
COG id: COG5520
COG function: function code M; O-Glycosyl hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI54607043, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI54607045, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI54607047, Length=433, Percent_Identity=25.4041570438799, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI284807150, Length=433, Percent_Identity=25.4041570438799, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI284807152, Length=388, Percent_Identity=26.0309278350515, Blast_Score=122, Evalue=1e-27, Organism=Caenorhabditis elegans, GI115532470, Length=448, Percent_Identity=29.2410714285714, Blast_Score=172, Evalue=4e-43, Organism=Caenorhabditis elegans, GI115532472, Length=448, Percent_Identity=29.2410714285714, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17542884, Length=471, Percent_Identity=27.8131634819533, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI193204210, Length=450, Percent_Identity=25.5555555555556, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17539758, Length=397, Percent_Identity=26.7002518891688, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI17539756, Length=396, Percent_Identity=26.7676767676768, Blast_Score=134, Evalue=2e-31, Organism=Caenorhabditis elegans, GI25151335, Length=386, Percent_Identity=26.9430051813472, Blast_Score=130, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.2.1.45
Molecular weight: Translated: 53999; Mature: 53999
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKH CCCEEEEEEEEHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECHH QQQIDGFGACFNELGWLSLSKLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWY HHHHHHHHHHHHHHCCEEHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC SYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLWASPWCPPAWMKYNKHYASAY CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCHHHCCC TGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ CCCCHHHHHHCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPAS CCCCCCEECHHHHCCHHHHHHHHHHHCCCCEEECCEEEEECCHHHHHHHHHHHHHCCCCC GKYVKGVGFQWAGKGAIAGIHKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNG CCEEECCCEEECCCCCEEHHHHCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHCC VSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTPEYYVMKHVSHYVQPGAYKLE CEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHCCCCEEEE TEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD CCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEC >Mature Secondary Structure MKIPVFILSISLYLSSCSFTPRAEWVTTTENTPWAEQPDLISALADTIPNIDITILTEKH CCCEEEEEEEEHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECHH QQQIDGFGACFNELGWLSLSKLEPSVREEIMEELFFPGVGANFTICRMPVGANDFSRDWY HHHHHHHHHHHHHHCCEEHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC SYDEVDGDFTMEHFTIANDQQTLIPFIKNARKYQPDLRLWASPWCPPAWMKYNKHYASAY CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHCCHHHCCC TGENYDEKYRNGLSADKVGHEGTDMFIQDSLYLKAYALYFSKFIEAYKKHGIPIFAIMPQ CCCCHHHHHHCCCCHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC NEFNSAQIFPSCCWTSASLANFIGNYLGPAMQVQGVDIMFGTMERANESLVDTVLTDPAS CCCCCCEECHHHHCCHHHHHHHHHHHCCCCEEECCEEEEECCHHHHHHHHHHHHHCCCCC GKYVKGVGFQWAGKGAIAGIHKRYPGLKLYQTEQECGDGKNDWKGAMYSWGLMRHFLDNG CCEEECCCEEECCCCCEEHHHHCCCCCEEEECHHHHCCCCCCCCCHHHHHHHHHHHHHCC VSAYMYWNISLENGGISRWGWAQNSLVVVDPQTKSYRYTPEYYVMKHVSHYVQPGAYKLE CEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHHHCCCCEEEE TEGAYTNLLAFRNPDNSIALIIANETSDDRSLSIRIGDRVYTPIVKAYSMNTLLVD CCCCEEEEEEEECCCCCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-glucosyl-N-acylsphingosine; H2O
Specific reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA