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The map label for this gene is sufC [C]

Identifier: 150010117

GI number: 150010117

Start: 4329238

End: 4329993

Strand: Direct

Name: sufC [C]

Synonym: BDI_3537

Alternate gene names: 150010117

Gene position: 4329238-4329993 (Clockwise)

Preceding gene: 150010116

Following gene: 150010118

Centisome position: 89.98

GC content: 48.81

Gene sequence:

>756_bases
ATGTTAGAGGTTAAGAATTTACATGCCAACGTAAATGGCAAAGAGATATTGAAAGGTATCAACCTGTCGGTGAAAGCGGG
TGAGGTACATGCTATCATGGGACCGAACGGTTCCGGAAAAAGTACGTTAAGTAGTGTATTGGTAGGTAATCCCGCTTTTG
AGGTAACGGAAGGAGAGGTTATCTTCAACGGTAAGAATCTGCTGGATCTTTCTCCCGAGGATCGTAGCCGTGAGGGTATT
TTCTTGAGCTTCCAATATCCGGTCGAGATCCCGGGAGTTAGTATGGTGAACTTTATGCGTGCGGCGTTGAACGAGCACCG
TAAATATAACGGTCTGGAACCGGTTTCGGCTACGGACTTCTTGAAATTGATGCGTGAGAAACGTGCGATCGTCGAGCTGG
ATAATAAACTGGCCAGCCGTAGCGTGAACGAAGGTTTCTCCGGTGGAGAGAAAAAACGGAACGAGATCTTCCAGATGGCG
ATGCTGGAGCCGAAATTGGCGATCTTGGATGAGACGGATAGTGGTTTGGATATCGATGCCTTGCGTATCGTGGCGCATGG
CGTGAACCAGTTGAGGACTCCGGAGAATGCCGCTATCGTAATCACGCACTATCAGCGTCTGCTGGATTACATCAAGCCGG
ATGTGGTTCATGTGCTTTACAAAGGCCGTATCGTGAAGACCGCCGGTCCGGAATTGGCCTTGGAACTGGAAGAGAAAGGT
TACGACTGGATCAAGAAAGAGATGGGAGATGAGTAA

Upstream 100 bases:

>100_bases
GTTTGCTGTCGAGGCTCAGAAATTACTAACGATCTCGCTGGAAGGCAGCGTAGGATAGAATAATTTTCAATTTTCAACTT
TCAATTTTCAATAAGAAAAG

Downstream 100 bases:

>100_bases
TATGAAGGCCGAGCAACAATATATCGATCTTTTCGCCCAATGTGAGGATCTGGTATGTCGTCATAGTACGCCGGTGATGA
ATGCCCTTAGGGCTGATGCC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLEVKNLHANVNGKEILKGINLSVKAGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTEGEVIFNGKNLLDLSPEDRSREGI
FLSFQYPVEIPGVSMVNFMRAALNEHRKYNGLEPVSATDFLKLMREKRAIVELDNKLASRSVNEGFSGGEKKRNEIFQMA
MLEPKLAILDETDSGLDIDALRIVAHGVNQLRTPENAAIVITHYQRLLDYIKPDVVHVLYKGRIVKTAGPELALELEEKG
YDWIKKEMGDE

Sequences:

>Translated_251_residues
MLEVKNLHANVNGKEILKGINLSVKAGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTEGEVIFNGKNLLDLSPEDRSREGI
FLSFQYPVEIPGVSMVNFMRAALNEHRKYNGLEPVSATDFLKLMREKRAIVELDNKLASRSVNEGFSGGEKKRNEIFQMA
MLEPKLAILDETDSGLDIDALRIVAHGVNQLRTPENAAIVITHYQRLLDYIKPDVVHVLYKGRIVKTAGPELALELEEKG
YDWIKKEMGDE
>Mature_251_residues
MLEVKNLHANVNGKEILKGINLSVKAGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTEGEVIFNGKNLLDLSPEDRSREGI
FLSFQYPVEIPGVSMVNFMRAALNEHRKYNGLEPVSATDFLKLMREKRAIVELDNKLASRSVNEGFSGGEKKRNEIFQMA
MLEPKLAILDETDSGLDIDALRIVAHGVNQLRTPENAAIVITHYQRLLDYIKPDVVHVLYKGRIVKTAGPELALELEEKG
YDWIKKEMGDE

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=215, Percent_Identity=28.3720930232558, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=215, Percent_Identity=28.3720930232558, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI42741659, Length=233, Percent_Identity=30.0429184549356, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI153792144, Length=180, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI156105685, Length=230, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1787972, Length=247, Percent_Identity=61.1336032388664, Blast_Score=310, Evalue=5e-86,
Organism=Escherichia coli, GI1786654, Length=252, Percent_Identity=26.984126984127, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1789891, Length=232, Percent_Identity=31.0344827586207, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786319, Length=214, Percent_Identity=31.3084112149533, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=237, Percent_Identity=27.4261603375527, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1790525, Length=198, Percent_Identity=31.3131313131313, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI87081709, Length=234, Percent_Identity=25.2136752136752, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1786345, Length=214, Percent_Identity=30.3738317757009, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1786698, Length=208, Percent_Identity=28.8461538461538, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789672, Length=232, Percent_Identity=26.7241379310345, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787792, Length=177, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI87082267, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787143, Length=233, Percent_Identity=26.1802575107296, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI48994883, Length=240, Percent_Identity=26.6666666666667, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1789864, Length=242, Percent_Identity=22.7272727272727, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788761, Length=232, Percent_Identity=22.8448275862069, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1789593, Length=192, Percent_Identity=28.6458333333333, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1789962, Length=222, Percent_Identity=29.2792792792793, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=246, Percent_Identity=30.0813008130081, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI212646699, Length=252, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=234, Percent_Identity=29.4871794871795, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193209708, Length=240, Percent_Identity=28.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=214, Percent_Identity=28.9719626168224, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17533971, Length=238, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=28.4403669724771, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17543740, Length=239, Percent_Identity=27.6150627615063, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27855; Mature: 27855

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEVKNLHANVNGKEILKGINLSVKAGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTEGEV
CCEECCEECCCCHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCEE
IFNGKNLLDLSPEDRSREGIFLSFQYPVEIPGVSMVNFMRAALNEHRKYNGLEPVSATDF
EECCCCEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LKLMREKRAIVELDNKLASRSVNEGFSGGEKKRNEIFQMAMLEPKLAILDETDSGLDIDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LRIVAHGVNQLRTPENAAIVITHYQRLLDYIKPDVVHVLYKGRIVKTAGPELALELEEKG
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCHHHEEHHHCCEEEEECCCCEEEEEHHCC
YDWIKKEMGDE
HHHHHHHHCCC
>Mature Secondary Structure
MLEVKNLHANVNGKEILKGINLSVKAGEVHAIMGPNGSGKSTLSSVLVGNPAFEVTEGEV
CCEECCEECCCCHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCEE
IFNGKNLLDLSPEDRSREGIFLSFQYPVEIPGVSMVNFMRAALNEHRKYNGLEPVSATDF
EECCCCEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LKLMREKRAIVELDNKLASRSVNEGFSGGEKKRNEIFQMAMLEPKLAILDETDSGLDIDA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHH
LRIVAHGVNQLRTPENAAIVITHYQRLLDYIKPDVVHVLYKGRIVKTAGPELALELEEKG
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCHHHEEHHHCCEEEEECCCCEEEEEHHCC
YDWIKKEMGDE
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]