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The map label for this gene is sufD [C]

Identifier: 150010118

GI number: 150010118

Start: 4329986

End: 4331338

Strand: Direct

Name: sufD [C]

Synonym: BDI_3538

Alternate gene names: 150010118

Gene position: 4329986-4331338 (Clockwise)

Preceding gene: 150010117

Following gene: 150010119

Centisome position: 89.99

GC content: 48.26

Gene sequence:

>1353_bases
ATGAGTAATATGAAGGCCGAGCAACAATATATCGATCTTTTCGCCCAATGTGAGGATCTGGTATGTCGTCATAGTACGCC
GGTGATGAATGCCCTTAGGGCTGATGCCTTGGCGAACTTTGAGCGACTCGGATTCCCCTCCACGAGAAGCGAGGATTATA
AATATACGGATGTAGCCCAAGCGTTCGCTCCGGATTACGGTTTAAATATCAACCGGGTCGCTATCCCGGTGAATCCTTAT
GACGTATTCCGTTGTGACGTACCGAACTTGAGCACATCGTTATACTTTGTCGTGAACGATACGTTTTACGATAAGGACTT
ACCGAAAGCACATTTGCCGGAAGGCGTGTATGCTGGAGGGTTGAAGGCTTTTACGGAGCAATATCCGGAGATCGCTTCCA
AGTATTACGGAAAGGCGGCGCCGAGTAGCAAGGATGGTATTATCGCATTGAATACGATGTTGGCTCAAGATGGTTTTGTG
GTGTATGTACCGAAAAATGTCGTGGTTGAGCGTCCTATCCAATTAGTGAATATATTCCGTAATGATGTGGATACGATGGC
GAACCGTCGTGTCCTGGTGATTATGGAACCTCATTCGGAAGCGAAGCTATTGGTTTGCGATCATAGTATCGATGACGTGA
AATTCTTGGCGACTCAAGTGGTTGAGATTTTCGCGGAGGAAGGTGCTCGCTTTGATTATTATGATTTGGAAGAAAGCAGC
GAGTCTACGACCCGTTTCTCTTCCGTACACGTAAAGCAGGCGGCCTCGACCAATGTCTTGGTAAACGGTATTACGTTGAC
GAATGGCTTGACTCGCAACAATTATTATGTGGAACTGAATGGCGAGTATGCCGAGTCTACCTTATGCGGTATGTCCGTTC
TGGACAAGGAGCAACAGATGGATACCTATAGCCATATTACCCATGCGGTTCCGAATTGTACCAGCAACGAGTTGTTCAAG
AACGTACTGAATGATCATGCCGTAGGTGTCTTCAGTGGACGTATCTTGGTGAAAGAGGATGCCCAGAAGACTGCCGCTTA
CCAGACGAACCGTAATCTGTGCGCTACCCGTGAGGCCCGTATGTACAGCAAGCCGCAACTGGAGATTTATGCGGACGACG
TAAAATGCTCGCACGGTATGACGACCGGTCAGTTGGATGAGAACGCTTTGTTCTATATGCAAAGCCGCGGTATCCCGCGT
GACGAGGCCCGTATGTTATTGAGCGTGGCTTTCACTTCCGACGTGATCGACCATGTACGCTTGGAGGCGTTGAAAGACCG
TTTGCATAAACTGGTAGAGAAACGTTTCCGCGGTGAACTGGCTAAATGCGCCGGTTGCCGGATTTGTAAATAA

Upstream 100 bases:

>100_bases
CATGTGCTTTACAAAGGCCGTATCGTGAAGACCGCCGGTCCGGAATTGGCCTTGGAACTGGAAGAGAAAGGTTACGACTG
GATCAAGAAAGAGATGGGAG

Downstream 100 bases:

>100_bases
TTGCGAATAAGAGGAAAACTATAATCAGGCATGGATTATCCCGACGATCATGTAGGGAACCATGTCTGATTTTTCGTATC
TTTGGCAGTGACAAATTAAA

Product: putative ABC transporter protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MSNMKAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPY
DVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFV
VYVPKNVVVERPIQLVNIFRNDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESS
ESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFK
NVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPR
DEARMLLSVAFTSDVIDHVRLEALKDRLHKLVEKRFRGELAKCAGCRICK

Sequences:

>Translated_450_residues
MSNMKAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPY
DVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFV
VYVPKNVVVERPIQLVNIFRNDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESS
ESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFK
NVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPR
DEARMLLSVAFTSDVIDHVRLEALKDRLHKLVEKRFRGELAKCAGCRICK
>Mature_449_residues
SNMKAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLGFPSTRSEDYKYTDVAQAFAPDYGLNINRVAIPVNPYD
VFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGGLKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVV
YVPKNVVVERPIQLVNIFRNDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESSE
STTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQMDTYSHITHAVPNCTSNELFKN
VLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREARMYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRD
EARMLLSVAFTSDVIDHVRLEALKDRLHKLVEKRFRGELAKCAGCRICK

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=410, Percent_Identity=27.0731707317073, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI87081955, Length=309, Percent_Identity=22.9773462783171, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 50636; Mature: 50505

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNMKAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLGFPSTRSEDYKYTDVAQ
CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGG
HHCCCCCCCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCHHHCCCCCHHCH
LKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFR
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHCHHHHHHHHH
NDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESS
HHHHHHHCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCC
ESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQM
CCHHHHHHEEHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
DTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREAR
HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECEEEEECCHHHHHHHHCCCCCHHCHHHH
MYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVR
HCCCCCEEEEECCEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LEALKDRLHKLVEKRFRGELAKCAGCRICK
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCC
>Mature Secondary Structure 
SNMKAEQQYIDLFAQCEDLVCRHSTPVMNALRADALANFERLGFPSTRSEDYKYTDVAQ
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
AFAPDYGLNINRVAIPVNPYDVFRCDVPNLSTSLYFVVNDTFYDKDLPKAHLPEGVYAGG
HHCCCCCCCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCHHHCCCCCHHCH
LKAFTEQYPEIASKYYGKAAPSSKDGIIALNTMLAQDGFVVYVPKNVVVERPIQLVNIFR
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCHHHCHHHHHHHHH
NDVDTMANRRVLVIMEPHSEAKLLVCDHSIDDVKFLATQVVEIFAEEGARFDYYDLEESS
HHHHHHHCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCC
ESTTRFSSVHVKQAASTNVLVNGITLTNGLTRNNYYVELNGEYAESTLCGMSVLDKEQQM
CCHHHHHHEEHHHCCCCCEEEEEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHH
DTYSHITHAVPNCTSNELFKNVLNDHAVGVFSGRILVKEDAQKTAAYQTNRNLCATREAR
HHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEECEEEEECCHHHHHHHHCCCCCHHCHHHH
MYSKPQLEIYADDVKCSHGMTTGQLDENALFYMQSRGIPRDEARMLLSVAFTSDVIDHVR
HCCCCCEEEEECCEECCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LEALKDRLHKLVEKRFRGELAKCAGCRICK
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]