Click here to switch to the map view.

The map label for this gene is sufB [C]

Identifier: 150010116

GI number: 150010116

Start: 4327750

End: 4329195

Strand: Direct

Name: sufB [C]

Synonym: BDI_3536

Alternate gene names: 150010116

Gene position: 4327750-4329195 (Clockwise)

Preceding gene: 150010115

Following gene: 150010117

Centisome position: 89.95

GC content: 48.34

Gene sequence:

>1446_bases
ATGCAGGATTCAAATCATATCATTAATGAGGTAACGAGCGGAGATTATAAATATGGCTTCGTTACCGATATTGATACGGA
GGTGATCCATCGTGGATTAGACGAGGAGACGGTCCGTATTATCTCTGCCAAGAAGAACGAGCCGGAATGGTTACTCGAGT
TCCGTTTGAAGGCTTTTCGCCATTGGCAGACGTTGGAGATGCCTACATGGCCTCACTTGAATATCCCGCCGATCGATTAT
CAGGACATTATCTATTATGCCGCCCCTAAGAAAAAAGAGGGACCAAAGAGCTTGGATGAGGTAGATCCTGAGTTGTTGAA
AACATTCGATAAACTGGGTATTCCTTTGGAAGAACAGAAGCATTTAAGCGGAATGGCGGTAGACGCCGTGATGGATAGTG
TTTCCGTGAAGACAACTTTCAAGGAGAATCTCGCGGAGAAGGGGATTATTTTCTGTTCGTTCAGCGAGGCTGTACAACAT
CATCCGGACTTGGTGCAGAAGTATTTGGGCAGCGTGGTTGGTTATCGTGATAATTTCTTCGCCGCCTTGAATTCGGCCGT
GTTCTCGGATGGTTCGTTTGTTTATATACCGAAGGGCGTACGTTGCCCGATGGAGTTGAGTACGTATTTCCGTATCAATG
CCGCTAATACCGGACAGTTCGAGCGTACCTTGATTGTCGCAGACGATGAGGCGTATGTAAGTTATCTGGAAGGATGTACG
GCGCCGATGCGTGACGAGAACCAATTGCATGCCGCTATCGTGGAGATCGTGGCGAACGAGCGTGCCGAGGTGAAGTATTC
TACCGTACAGAATTGGTATCCGGGTGATAAGGAAGGTAAAGGCGGTATCTATAACTTCGTGACGAAACGAGGTTTGTGCA
AAGGTGAGGGTAGCAAGATCTCTTGGACGCAAGTAGAGACCGGTTCGGCGATCACTTGGAAATATCCGAGCTGTATCTTG
GCGGGTGATAACTCGGTAGGTGAGTTTTACTCGGTTGCCGTGACCAATAATTACCAACAGGCCGATACGGGTACGAAGAT
GATTCATCTGGGTAAGAATACGAAAAGTACGATCGTATCCAAGGGTATCTCTGCCGGTCATAGCCAGAATAGCTATCGGG
GATTGGTGAAGGTGTCCGCCCGTGCGGAAGGCGCCCGAAACCATAGCCAATGCGATAGTTTGTTACTAAGCTCTACTTGT
GGAGCTCATACGTTCCCTTACGCTGATATTCAGAATGAGACGGCGATCGTGGAGCATGAGGCTACGACGAGTAAGATCAG
TGAGGAGCAATTGTTCTACTGCCAGCAACGGGGTATCTCGGTAGAAGAGGCTGTTGGTTTGATCGTGAATGGATATGCCC
GCGAGGTAATGAATAAGTTACCGATGGAGTTTGCTGTCGAGGCTCAGAAATTACTAACGATCTCGCTGGAAGGCAGCGTA
GGATAG

Upstream 100 bases:

>100_bases
TTTTTATTATAGCGTGAAGCAAATAGTACCAACAATTTTCCCACATAATTTGTTTTCATTAGGAGAATGAAGGGCTTTTA
TCAATGGTTAATTTATAATT

Downstream 100 bases:

>100_bases
AATAATTTTCAATTTTCAACTTTCAATTTTCAATAAGAAAAGATGTTAGAGGTTAAGAATTTACATGCCAACGTAAATGG
CAAAGAGATATTGAAAGGTA

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MQDSNHIINEVTSGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFRHWQTLEMPTWPHLNIPPIDY
QDIIYYAAPKKKEGPKSLDEVDPELLKTFDKLGIPLEEQKHLSGMAVDAVMDSVSVKTTFKENLAEKGIIFCSFSEAVQH
HPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSYLEGCT
APMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKGEGSKISWTQVETGSAITWKYPSCIL
AGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTKSTIVSKGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLLSSTC
GAHTFPYADIQNETAIVEHEATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTISLEGSV
G

Sequences:

>Translated_481_residues
MQDSNHIINEVTSGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFRHWQTLEMPTWPHLNIPPIDY
QDIIYYAAPKKKEGPKSLDEVDPELLKTFDKLGIPLEEQKHLSGMAVDAVMDSVSVKTTFKENLAEKGIIFCSFSEAVQH
HPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSYLEGCT
APMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKGEGSKISWTQVETGSAITWKYPSCIL
AGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTKSTIVSKGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLLSSTC
GAHTFPYADIQNETAIVEHEATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTISLEGSV
G
>Mature_481_residues
MQDSNHIINEVTSGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFRHWQTLEMPTWPHLNIPPIDY
QDIIYYAAPKKKEGPKSLDEVDPELLKTFDKLGIPLEEQKHLSGMAVDAVMDSVSVKTTFKENLAEKGIIFCSFSEAVQH
HPDLVQKYLGSVVGYRDNFFAALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSYLEGCT
APMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKGEGSKISWTQVETGSAITWKYPSCIL
AGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTKSTIVSKGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLLSSTC
GAHTFPYADIQNETAIVEHEATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTISLEGSV
G

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=482, Percent_Identity=62.655601659751, Blast_Score=640, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53500; Mature: 53500

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSNHIINEVTSGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFR
CCCCCCHHHHCCCCCEEEEEEECCCHHHHHCCCCHHHEEEEECCCCCHHHHHHHHHHHHH
HWQTLEMPTWPHLNIPPIDYQDIIYYAAPKKKEGPKSLDEVDPELLKTFDKLGIPLEEQK
CCCEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHH
HLSGMAVDAVMDSVSVKTTFKENLAEKGIIFCSFSEAVQHHPDLVQKYLGSVVGYRDNFF
HCCCEEHHHHHHHHHEEHHHHHHHHHCCEEEEEHHHHHHCCHHHHHHHHHHHHCCCCHHH
AALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSYLEGCT
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHCCC
APMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKGEGSKI
CCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEE
SWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTKSTIVS
EEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCHHHHHH
KGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLLSSTCGAHTFPYADIQNETAIVEHE
HCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
ATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTISLEGSV
CHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEECCCC
G
C
>Mature Secondary Structure
MQDSNHIINEVTSGDYKYGFVTDIDTEVIHRGLDEETVRIISAKKNEPEWLLEFRLKAFR
CCCCCCHHHHCCCCCEEEEEEECCCHHHHHCCCCHHHEEEEECCCCCHHHHHHHHHHHHH
HWQTLEMPTWPHLNIPPIDYQDIIYYAAPKKKEGPKSLDEVDPELLKTFDKLGIPLEEQK
CCCEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHH
HLSGMAVDAVMDSVSVKTTFKENLAEKGIIFCSFSEAVQHHPDLVQKYLGSVVGYRDNFF
HCCCEEHHHHHHHHHEEHHHHHHHHHCCEEEEEHHHHHHCCHHHHHHHHHHHHCCCCHHH
AALNSAVFSDGSFVYIPKGVRCPMELSTYFRINAANTGQFERTLIVADDEAYVSYLEGCT
HHHHHHHCCCCCEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCHHHHHHHHCCC
APMRDENQLHAAIVEIVANERAEVKYSTVQNWYPGDKEGKGGIYNFVTKRGLCKGEGSKI
CCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCCEE
SWTQVETGSAITWKYPSCILAGDNSVGEFYSVAVTNNYQQADTGTKMIHLGKNTKSTIVS
EEEEEECCCEEEEECCEEEEECCCCCCCEEEEEEECCCHHCCCCCEEEEECCCCHHHHHH
KGISAGHSQNSYRGLVKVSARAEGARNHSQCDSLLLSSTCGAHTFPYADIQNETAIVEHE
HCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEC
ATTSKISEEQLFYCQQRGISVEEAVGLIVNGYAREVMNKLPMEFAVEAQKLLTISLEGSV
CHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCEEEEEEEECCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]