| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is yuxL [H]
Identifier: 150009121
GI number: 150009121
Start: 2977196
End: 2979679
Strand: Direct
Name: yuxL [H]
Synonym: BDI_2522
Alternate gene names: 150009121
Gene position: 2977196-2979679 (Clockwise)
Preceding gene: 150009120
Following gene: 150009122
Centisome position: 61.88
GC content: 46.22
Gene sequence:
>2484_bases ATGATAAACAAAAACATCTTAATTCTTTCAGCCCTATGCTCCTGTTGCTCACTATGGGCGGATGAGGTTGTCGTGCGACA TTACAATTACGCCGGCCCTTACGAGGTGAAAAAGCCTTTCCTAGCAGATAGCTTGGATGTAAACAGTAAGAGATTTTCCG ACAAGGAACTATTGAACACGACCGTTCCTTTCTGCAACCTTTCCCAAAGCGGACAAACCCTTGACGCGGCGTCTTCCGGA GAGCTGACCTTGCCAACCTCGGCCTCTTCCTACGCGCTACATTTGGTTTCCTTCTACCTGAATAGTGACCGCTATACAAA AGGTACCTTAAGGATCAATGGCCCTGAGATTTCAGAAGTCTACGTGGATGGACAACCCATAAAACTAACCCAAGGAGAAG CCTCGTTGACCTTGGAGCCGCGACGCTATGAAATCGTAATTAAATATTTATCTGAGAGCCACAAAGAGAATGCCTTAAAA GCCTCATTCAACCCGGAAAAAGACGCGGTGGTAACCGCGACCGTCAATCCGGAGAAACGTTATACATTAAGTGATGTATT TGATGGTAAACGCATCCAATCCGCCAGCCTGTCCCCGAATGGAAAATTCATTATCGTCTCCTATCAAGAAACCTATCCCG GCGGAAAGCAGTCCTCATTTACCCAGATACTAGACAAGGCTACCGGTTCCGTATTGGTTGAGAACGGACAGAGCTTACGC TGGATGCCTAAAAGCAATCTGGCCTATTACACCCGGAAAGGGATGAAAGGCACGGAATTGGTGACCCTAGACCCTACCAG TAAAAAGGAGAACATCCTTTCCAGCCAATTGCCTGAAGGTTCTTTCAGCTTCGGGCCTACCGAAGACTATCTATTATTCT CCATACGGGAGAAAGGACCGCAAGAACGAAAAGAGATCCAAGAGATACTGGTGCCGGATGATCGCCAACCGGGATGGAGA AACCGTATGTTTATCCATAAATATGACCTGCGAACCGGATTGTTCCAACGGCTCACCTATGGACATACTTCTACTTACAT CAACGATGTATCTCAAGACGGCCACTATCTGCTATTCAGTCGCAGGGAACCGAATTTAACGGAGCGCCCTTTCTCACGTA CATATATATATAAGATGGATCTACGAACCATGCATGTGGATACCCTTATAAAAGGTGAGAAATTCGTAAGCCGTGCCGTT TTCTCCCCGGATGCCACCCAATTACTCGTTGACGCATCTGGAGAGGCTTTCGATGGTATCGGATTAAAGATCAAAGAAGG ACAGACATCCAATACGAGCGACGGGCAATTATTCCTATACAATATAGCAGATAAAAGTATAAAGCCGCTTACGAAAGATT TTGACCCCTCTGTCGATTCCTACGAGTGGAACGCCCTCGATAAACAAATCTATATCATGGCGAAAGATAAGGACCGTGTT CGCATGTATAGTCTAAACCCGTCCAACGGAAAGATTAAGCAACTTCAAGCCAAGGAAGATGTCATCTCCGATTACTCCAT CGCCAATCAAGCTTTCGAAATGGTTTATTTCGGATTAAGCGCTTCCAATTCCCAAAGGCTTTATACCTATAACCTGAAAA ACGACGCCTCTTCCTGCTTGATCGATCTCTCCAAAGAGATCTTGAGAGACGTCACTTTAGGAGAAGTGCAAGATTGGAAT TTCGTTTCCGCCCAAGGGGATACGATTTACGGCCGCTTCTATCTCCCTCCTCATTTTGACGCAACTAAGAAATATCCGAT GATCGTGAATTATTACGGAGGAACAACTCCTACGGCCCGGGTGATGGAAAGCCGTTATCCTTCGCATGTATACGCCGGCT TAGGGTACATCGTCTACATCATACAGCCCAGTGGAGCGACTGGATTCGGCCAAGAGTTCTCCGCACGCCATGTCAACGCA TGGGGTAAACTTACCGCTGACGAGATCATCGAAGGCACGAAAAAGTTCTGTGAGGAGCATCCTTTTGTCAACACGAAGAA AATCGGTTGCATGGGGGCTTCATACGGAGGTTTCATGACTCAATACCTACAAATAAAAACAGATATATTCGCGGCGGCCA TGTCTCATGCGGGAATCAGCGACATCACCAGCTATTGGGGAGAAGGTTACTGGGGATATTCATACAGCTCGTTGGCTAGC GCTAACAGTTATCCATGGAATGCCCGGGATATGTACACTTTACAAAGTCCGCTGTTTAACGCAGACAAGATCAATACCCC GATCTTGTTCTTACATGGAACCGCAGACACGAATGTTCCGATTGGAGAGAGCATCCAGATGTTTACCGCATTAAAATTAT TGGGTAAGCCTACAGCGTTTGTCCAGGTAGAAGGAGAGAACCACCATATACTGGATTATGAGAAACGTATCTTGTGGAAT AACACAATTTACGCATGGTTCGCTAAGTGGTTGAAAGATCAACCGGAGTGGTGGGACGCATTATATCCTCCGAAAAGCCT ATAA
Upstream 100 bases:
>100_bases TCGTAGATGAGATAGAAATCTTATAAGATAATGATACAGCGAGATGGCTGAGAGATACCCGCCATCTCGCTTTCTTATTT TAAACTAAATAACAAATATC
Downstream 100 bases:
>100_bases AAATCAAAATAGGTCACTCTATTCACATATATCTAAAGAGTATCTTTATTAGATACTCTTTTTTTATTTAAATACATTAG ATAGTATTTATGAAACACCT
Product: putative alanyl dipeptidyl peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNTTVPFCNLSQSGQTLDAASSG ELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEVYVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALK ASFNPEKDAVVTATVNPEKRYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWR NRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAV FSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCLIDLSKEILRDVTLGEVQDWN FVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTARVMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNA WGKLTADEIIEGTKKFCEEHPFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAFVQVEGENHHILDYEKRILWN NTIYAWFAKWLKDQPEWWDALYPPKSL
Sequences:
>Translated_827_residues MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNTTVPFCNLSQSGQTLDAASSG ELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEVYVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALK ASFNPEKDAVVTATVNPEKRYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWR NRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAV FSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCLIDLSKEILRDVTLGEVQDWN FVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTARVMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNA WGKLTADEIIEGTKKFCEEHPFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAFVQVEGENHHILDYEKRILWN NTIYAWFAKWLKDQPEWWDALYPPKSL >Mature_827_residues MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNTTVPFCNLSQSGQTLDAASSG ELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEVYVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALK ASFNPEKDAVVTATVNPEKRYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWR NRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAV FSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCLIDLSKEILRDVTLGEVQDWN FVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTARVMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNA WGKLTADEIIEGTKKFCEEHPFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAFVQVEGENHHILDYEKRILWN NTIYAWFAKWLKDQPEWWDALYPPKSL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI37577089, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI18450280, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI194394146, Length=267, Percent_Identity=26.2172284644195, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI16933540, Length=239, Percent_Identity=25.5230125523013, Blast_Score=68, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17552908, Length=203, Percent_Identity=29.064039408867, Blast_Score=89, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25144537, Length=291, Percent_Identity=25.4295532646048, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144540, Length=291, Percent_Identity=25.4295532646048, Blast_Score=71, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324793, Length=247, Percent_Identity=27.9352226720648, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI45550825, Length=236, Percent_Identity=22.4576271186441, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI45553511, Length=236, Percent_Identity=22.4576271186441, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI45551969, Length=236, Percent_Identity=22.4576271186441, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 93508; Mature: 93508
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNT CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC TVPFCNLSQSGQTLDAASSGELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEV CCCCEECCCCCCEEECCCCCCEEECCCCCHHHHEEEHEEECCCCEEEEEEEECCCCEEEE YVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALKASFNPEKDAVVTATVNPEKR EECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCCC YTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR EEHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCEEE WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGP EECCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCC QERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFS HHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEE RREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSPDATQLLVDASGEAFDGI CCCCCCCCCCCCEEEEEEECCEEEEHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCC GLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV CEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCE RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCL EEEEECCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHH IDLSKEILRDVTLGEVQDWNFVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTAR HHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHH VMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNAWGKLTADEIIEGTKKFCEEH HHHHCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHC PFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCC ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAF CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEE VQVEGENHHILDYEKRILWNNTIYAWFAKWLKDQPEWWDALYPPKSL EEEECCCCEEEECCCEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCC >Mature Secondary Structure MINKNILILSALCSCCSLWADEVVVRHYNYAGPYEVKKPFLADSLDVNSKRFSDKELLNT CCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHC TVPFCNLSQSGQTLDAASSGELTLPTSASSYALHLVSFYLNSDRYTKGTLRINGPEISEV CCCCEECCCCCCEEECCCCCCEEECCCCCHHHHEEEHEEECCCCEEEEEEEECCCCEEEE YVDGQPIKLTQGEASLTLEPRRYEIVIKYLSESHKENALKASFNPEKDAVVTATVNPEKR EECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEEECCCCC YTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSVLVENGQSLR EEHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCEEE WMPKSNLAYYTRKGMKGTELVTLDPTSKKENILSSQLPEGSFSFGPTEDYLLFSIREKGP EECCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEEHHCCC QERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFS HHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEE RREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSPDATQLLVDASGEAFDGI CCCCCCCCCCCCEEEEEEECCEEEEHHHHHCCHHHHHHHHCCCCCCEEEEECCCCCCCCC GLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDPSVDSYEWNALDKQIYIMAKDKDRV CEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCEEEEEEECCCCE RMYSLNPSNGKIKQLQAKEDVISDYSIANQAFEMVYFGLSASNSQRLYTYNLKNDASSCL EEEEECCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEECCCCCCCEEEEEECCCCHHHHH IDLSKEILRDVTLGEVQDWNFVSAQGDTIYGRFYLPPHFDATKKYPMIVNYYGGTTPTAR HHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHH VMESRYPSHVYAGLGYIVYIIQPSGATGFGQEFSARHVNAWGKLTADEIIEGTKKFCEEH HHHHCCCCHHHCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHC PFVNTKKIGCMGASYGGFMTQYLQIKTDIFAAAMSHAGISDITSYWGEGYWGYSYSSLAS CCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHCC ANSYPWNARDMYTLQSPLFNADKINTPILFLHGTADTNVPIGESIQMFTALKLLGKPTAF CCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCEEE VQVEGENHHILDYEKRILWNNTIYAWFAKWLKDQPEWWDALYPPKSL EEEECCCCEEEECCCEEEECCCHHHHHHHHHCCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]