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The map label for this gene is yadS [H]

Identifier: 150008334

GI number: 150008334

Start: 2022110

End: 2022721

Strand: Reverse

Name: yadS [H]

Synonym: BDI_1706

Alternate gene names: 150008334

Gene position: 2022721-2022110 (Counterclockwise)

Preceding gene: 150008336

Following gene: 150008333

Centisome position: 42.04

GC content: 42.97

Gene sequence:

>612_bases
ATGATAGATTTTATCACCTTTTGTGACTATACAGGGACCTTTGCGTTTGCCATAAGTGGCATAAGATTGGCTTCTGCGAA
ACAATTTGATTGGTTTGGCGCCTATGTGGTGGGTGTCGTGACCGCTGTAGGAGGAGGTACGATTCGTGATATTTTATTGA
ATGCGGTGCCTTTTTGGATGGAACAAGCCTCTTATTTGATTGTCTCGGCCTTGGCTTTGTTGTTCGTTATCGCTTTCCGA
AAATACGTGATCCGTTTGAACAATACATTTTTTATATTCGATGCTATCGGATTGGGGTTGTTTGTGGTGGTAGGTATCGC
CAAGACCTTGGATTTCGGGTTTCCCATGTGGGTGGCGATCGTGATGGGAACTATAACCGGCTCGTTTGGCGGTATGATGA
GGGATATATTGATTAATGAGGAACCTTTGATATTCCGGAAAGATATTTATGCGTTGGCTTGTGTCTTTGGCGGTTTGATA
TATTATATATGTATGCAAACTTCTATGTCGGCGGCGATGATACAGTTCGTATCGGCGTTGAGCGTGTTCCTCGCACGTAT
AATCGCCGTAAAATATCATATAAGTGTTCCGGTGTTGAAAGGAGAAGAATAA

Upstream 100 bases:

>100_bases
TAAACATTAAGGGATTCGTTTGGTTTAAATTATTGTTAGGTATTCTTTCTATAAATGCTGTTATTTGCGAACTATTCCGT
ATTTTTGCGAAAAAAACAAA

Downstream 100 bases:

>100_bases
TTTATTAACTTTGCATAATTATATGGACATGCATACTCAACAAGAAAAGGCTTCCATCCTGTTGATATATACGGGTGGGA
CGATAGGTATGATCGAGAAT

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MIDFITFCDYTGTFAFAISGIRLASAKQFDWFGAYVVGVVTAVGGGTIRDILLNAVPFWMEQASYLIVSALALLFVIAFR
KYVIRLNNTFFIFDAIGLGLFVVVGIAKTLDFGFPMWVAIVMGTITGSFGGMMRDILINEEPLIFRKDIYALACVFGGLI
YYICMQTSMSAAMIQFVSALSVFLARIIAVKYHISVPVLKGEE

Sequences:

>Translated_203_residues
MIDFITFCDYTGTFAFAISGIRLASAKQFDWFGAYVVGVVTAVGGGTIRDILLNAVPFWMEQASYLIVSALALLFVIAFR
KYVIRLNNTFFIFDAIGLGLFVVVGIAKTLDFGFPMWVAIVMGTITGSFGGMMRDILINEEPLIFRKDIYALACVFGGLI
YYICMQTSMSAAMIQFVSALSVFLARIIAVKYHISVPVLKGEE
>Mature_203_residues
MIDFITFCDYTGTFAFAISGIRLASAKQFDWFGAYVVGVVTAVGGGTIRDILLNAVPFWMEQASYLIVSALALLFVIAFR
KYVIRLNNTFFIFDAIGLGLFVVVGIAKTLDFGFPMWVAIVMGTITGSFGGMMRDILINEEPLIFRKDIYALACVFGGLI
YYICMQTSMSAAMIQFVSALSVFLARIIAVKYHISVPVLKGEE

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=206, Percent_Identity=37.8640776699029, Blast_Score=116, Evalue=9e-28,
Organism=Escherichia coli, GI87082304, Length=170, Percent_Identity=33.5294117647059, Blast_Score=102, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22376; Mature: 22376

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFITFCDYTGTFAFAISGIRLASAKQFDWFGAYVVGVVTAVGGGTIRDILLNAVPFWM
CCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EQASYLIVSALALLFVIAFRKYVIRLNNTFFIFDAIGLGLFVVVGIAKTLDFGFPMWVAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VMGTITGSFGGMMRDILINEEPLIFRKDIYALACVFGGLIYYICMQTSMSAAMIQFVSAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFLARIIAVKYHISVPVLKGEE
HHHHHHHHHHHHHEEEEEECCCC
>Mature Secondary Structure
MIDFITFCDYTGTFAFAISGIRLASAKQFDWFGAYVVGVVTAVGGGTIRDILLNAVPFWM
CCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EQASYLIVSALALLFVIAFRKYVIRLNNTFFIFDAIGLGLFVVVGIAKTLDFGFPMWVAI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHH
VMGTITGSFGGMMRDILINEEPLIFRKDIYALACVFGGLIYYICMQTSMSAAMIQFVSAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFLARIIAVKYHISVPVLKGEE
HHHHHHHHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA