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The map label for this gene is ydiF [H]

Identifier: 150008336

GI number: 150008336

Start: 2024372

End: 2026009

Strand: Reverse

Name: ydiF [H]

Synonym: BDI_1708

Alternate gene names: 150008336

Gene position: 2026009-2024372 (Counterclockwise)

Preceding gene: 150008338

Following gene: 150008334

Centisome position: 42.11

GC content: 50.18

Gene sequence:

>1638_bases
ATGATTTCAGTTGACGGACTAACAGTAGAGTTTGGTGGAAGCGCCCTTTTCTCGGATGTTTCTTTTGTGATTAACGAGAA
AGATCGTATCGCCTTGATGGGTAAGAACGGTGCCGGTAAATCTACCTTGTTGAAGATATTGGCCGGCGTGCGGGAGCCAA
GCCGTGGAAAAGTGTCCGCCCCTAAAGATACCGTGATCGCTTATTTGCCGCAGCATTTGATGACGGAGGATGGCCGTACC
GTTTTCGAGGAGACGGCGCAGGCTTTCGCCCATCTGCACGAGATGGAGGCGGAGATCGCCGAATTGAATAAGCAACTGGA
GACTCGTACGGACTATGAGTCGGATAGTTATATGGAGCTGATCGAGCGGGTCTCTACCTTGAGCGAGAAATTCTATTCCA
TAGAGGAGATCAATTACGACGCCGATATAGAGAAAACCTTGTTGGGACTGGGTTTCAAACGGGAGGATTTCGACCGGCAA
ACCAGTGAATTCAGCGGTGGCTGGCGTATGCGTATCGAGCTGGCGAAACTACTGTTGAAGAAACCGGATGTCCTTTTGCT
GGATGAGCCGACGAATCACTTGGATATCGAGTCTATCCAGTGGTTGGAGGATTTCTTGATCGATAACGGTCAGGCCGTAG
TGGTGATCAGCCACGACCGTGCGTTCGTGGATCATATCACGACTCGTACGATCGAGGTGACGATGGGCCGGATTTATGAT
TATAAGGTAAACTATAGCCAATACTTGCAATTACGGAAGGAACGTCGTGAGCAACAACAGAAGGCTTATGACGAGCAACA
GAAGATGATAGCCGAGACGAGAGAGTTCATCGAGCGTTTCAAGGGCACGTACTCCAAGACCTTGCAGGTGCAGAGCCGTG
TGAAGATGCTGGAGAAACTGGAGATCTTGGAGGTGGATGAGGAAGATACCTCGGCTTTGCGCTTGAAGTTTCCGCCTTCG
CCTCGTTCGGGCTCTTATCCGGTGACGATCGAGAATGTCTCGAAAGCGTATGGCGATCATACGGTTTTCCGAAACGCTAA
TCTGATGATCGAGCGAGGGGATAAGATCGCTTTCGTCGGGAAGAATGGCGAGGGTAAGTCTACCTTGGTGAAGTGTATCA
TGAAAGAGATCGAGCATGAGGGGACGTTGACGCTGGGGCATAACGTGATGATCGGTTATTTCGCCCAGAACCAAGCCTCC
CTGCTGGATGAGAATCTTACGGTTTTCCAGACGATAGACGATGTGGCGCAAGGCGATATCCGTAATAAGATCAAGGATCT
GCTGGGTGCGTTCATGTTTGGCGGCGAGAACTCGGCGAAGAAGGTGAAGGTGCTTTCCGGTGGCGAGCGCACACGTCTGG
CTATGATTAAGCTATTGTTGGAGCCTGTGAACTTGCTGATTCTGGATGAGCCGACAAACCATCTGGATATGAAGACGAAG
GATATCTTGAAGCAGGCGTTGCTTGACTTTGACGGGACGTTGATCGTCGTATCCCACGACCGTGATTTCTTGGATGGGCT
GGTCTCTAAGGTCTATGAGTTCGGAAACCAAAAAGTGACGGAGCATTTGGAAGGCATCTATGAGTTTATGCAGCGCAAGA
AGATGGAGAATCTGCGTGAGCTTGAGCGGAAGAATTAA

Upstream 100 bases:

>100_bases
TTGCCCCGGAAAGATCGTATGAAATCTCCTGTACATCCCTAATGAAAGGGATTTTTCTTATCTTCGCGGCTTCATTATAT
TAATGTATTAAAATAAACAT

Downstream 100 bases:

>100_bases
ATCCTCCACCCAAGCGTCAGCATAATATCATACGTGGAGCTATCTATATCTTTATGATACTTATAATGGGTACGGCGGGA
GAAATAACGATTTCGCAACG

Product: putative ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MISVDGLTVEFGGSALFSDVSFVINEKDRIALMGKNGAGKSTLLKILAGVREPSRGKVSAPKDTVIAYLPQHLMTEDGRT
VFEETAQAFAHLHEMEAEIAELNKQLETRTDYESDSYMELIERVSTLSEKFYSIEEINYDADIEKTLLGLGFKREDFDRQ
TSEFSGGWRMRIELAKLLLKKPDVLLLDEPTNHLDIESIQWLEDFLIDNGQAVVVISHDRAFVDHITTRTIEVTMGRIYD
YKVNYSQYLQLRKERREQQQKAYDEQQKMIAETREFIERFKGTYSKTLQVQSRVKMLEKLEILEVDEEDTSALRLKFPPS
PRSGSYPVTIENVSKAYGDHTVFRNANLMIERGDKIAFVGKNGEGKSTLVKCIMKEIEHEGTLTLGHNVMIGYFAQNQAS
LLDENLTVFQTIDDVAQGDIRNKIKDLLGAFMFGGENSAKKVKVLSGGERTRLAMIKLLLEPVNLLILDEPTNHLDMKTK
DILKQALLDFDGTLIVVSHDRDFLDGLVSKVYEFGNQKVTEHLEGIYEFMQRKKMENLRELERKN

Sequences:

>Translated_545_residues
MISVDGLTVEFGGSALFSDVSFVINEKDRIALMGKNGAGKSTLLKILAGVREPSRGKVSAPKDTVIAYLPQHLMTEDGRT
VFEETAQAFAHLHEMEAEIAELNKQLETRTDYESDSYMELIERVSTLSEKFYSIEEINYDADIEKTLLGLGFKREDFDRQ
TSEFSGGWRMRIELAKLLLKKPDVLLLDEPTNHLDIESIQWLEDFLIDNGQAVVVISHDRAFVDHITTRTIEVTMGRIYD
YKVNYSQYLQLRKERREQQQKAYDEQQKMIAETREFIERFKGTYSKTLQVQSRVKMLEKLEILEVDEEDTSALRLKFPPS
PRSGSYPVTIENVSKAYGDHTVFRNANLMIERGDKIAFVGKNGEGKSTLVKCIMKEIEHEGTLTLGHNVMIGYFAQNQAS
LLDENLTVFQTIDDVAQGDIRNKIKDLLGAFMFGGENSAKKVKVLSGGERTRLAMIKLLLEPVNLLILDEPTNHLDMKTK
DILKQALLDFDGTLIVVSHDRDFLDGLVSKVYEFGNQKVTEHLEGIYEFMQRKKMENLRELERKN
>Mature_545_residues
MISVDGLTVEFGGSALFSDVSFVINEKDRIALMGKNGAGKSTLLKILAGVREPSRGKVSAPKDTVIAYLPQHLMTEDGRT
VFEETAQAFAHLHEMEAEIAELNKQLETRTDYESDSYMELIERVSTLSEKFYSIEEINYDADIEKTLLGLGFKREDFDRQ
TSEFSGGWRMRIELAKLLLKKPDVLLLDEPTNHLDIESIQWLEDFLIDNGQAVVVISHDRAFVDHITTRTIEVTMGRIYD
YKVNYSQYLQLRKERREQQQKAYDEQQKMIAETREFIERFKGTYSKTLQVQSRVKMLEKLEILEVDEEDTSALRLKFPPS
PRSGSYPVTIENVSKAYGDHTVFRNANLMIERGDKIAFVGKNGEGKSTLVKCIMKEIEHEGTLTLGHNVMIGYFAQNQAS
LLDENLTVFQTIDDVAQGDIRNKIKDLLGAFMFGGENSAKKVKVLSGGERTRLAMIKLLLEPVNLLILDEPTNHLDMKTK
DILKQALLDFDGTLIVVSHDRDFLDGLVSKVYEFGNQKVTEHLEGIYEFMQRKKMENLRELERKN

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=510, Percent_Identity=32.9411764705882, Blast_Score=265, Evalue=1e-70,
Organism=Homo sapiens, GI27881506, Length=535, Percent_Identity=31.0280373831776, Blast_Score=230, Evalue=3e-60,
Organism=Homo sapiens, GI10947137, Length=535, Percent_Identity=31.0280373831776, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI10947135, Length=556, Percent_Identity=28.4172661870504, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI69354671, Length=556, Percent_Identity=28.4172661870504, Blast_Score=194, Evalue=1e-49,
Organism=Escherichia coli, GI1789751, Length=521, Percent_Identity=34.3570057581574, Blast_Score=318, Evalue=7e-88,
Organism=Escherichia coli, GI1787041, Length=536, Percent_Identity=33.955223880597, Blast_Score=314, Evalue=1e-86,
Organism=Escherichia coli, GI2367384, Length=525, Percent_Identity=33.9047619047619, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI1787182, Length=540, Percent_Identity=31.1111111111111, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1789864, Length=247, Percent_Identity=23.8866396761134, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1786703, Length=209, Percent_Identity=30.622009569378, Blast_Score=76, Evalue=7e-15,
Organism=Escherichia coli, GI48994997, Length=244, Percent_Identity=24.5901639344262, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1787758, Length=231, Percent_Identity=25.974025974026, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789962, Length=227, Percent_Identity=25.9911894273128, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1788165, Length=180, Percent_Identity=30.5555555555556, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI87081791, Length=191, Percent_Identity=26.7015706806283, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787500, Length=223, Percent_Identity=23.7668161434978, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1787029, Length=219, Percent_Identity=25.5707762557078, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI87081709, Length=192, Percent_Identity=25, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790467, Length=193, Percent_Identity=28.4974093264249, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI87081782, Length=220, Percent_Identity=29.0909090909091, Blast_Score=64, Evalue=3e-11,
Organism=Escherichia coli, GI1787712, Length=219, Percent_Identity=26.4840182648402, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1789593, Length=221, Percent_Identity=25.7918552036199, Blast_Score=62, Evalue=7e-11,
Organism=Escherichia coli, GI1786872, Length=249, Percent_Identity=24.0963855421687, Blast_Score=62, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17553372, Length=534, Percent_Identity=32.2097378277154, Blast_Score=259, Evalue=2e-69,
Organism=Caenorhabditis elegans, GI17555318, Length=548, Percent_Identity=30.6569343065693, Blast_Score=241, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI17559834, Length=561, Percent_Identity=27.9857397504456, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI115533608, Length=226, Percent_Identity=26.9911504424779, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=546, Percent_Identity=31.5018315018315, Blast_Score=273, Evalue=5e-74,
Organism=Saccharomyces cerevisiae, GI6320874, Length=550, Percent_Identity=29.8181818181818, Blast_Score=233, Evalue=5e-62,
Organism=Saccharomyces cerevisiae, GI6325030, Length=407, Percent_Identity=26.044226044226, Blast_Score=122, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323278, Length=402, Percent_Identity=24.6268656716418, Blast_Score=108, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=401, Percent_Identity=25.1870324189526, Blast_Score=103, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24666836, Length=551, Percent_Identity=33.0308529945554, Blast_Score=286, Evalue=4e-77,
Organism=Drosophila melanogaster, GI24642252, Length=557, Percent_Identity=31.0592459605027, Blast_Score=253, Evalue=3e-67,
Organism=Drosophila melanogaster, GI18859989, Length=557, Percent_Identity=31.0592459605027, Blast_Score=253, Evalue=3e-67,
Organism=Drosophila melanogaster, GI24641342, Length=539, Percent_Identity=29.6846011131725, Blast_Score=226, Evalue=2e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 62264; Mature: 62264

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVDGLTVEFGGSALFSDVSFVINEKDRIALMGKNGAGKSTLLKILAGVREPSRGKVSA
CEEECCEEEEECCCHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
PKDTVIAYLPQHLMTEDGRTVFEETAQAFAHLHEMEAEIAELNKQLETRTDYESDSYMEL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
IERVSTLSEKFYSIEEINYDADIEKTLLGLGFKREDFDRQTSEFSGGWRMRIELAKLLLK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHC
KPDVLLLDEPTNHLDIESIQWLEDFLIDNGQAVVVISHDRAFVDHITTRTIEVTMGRIYD
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHEEEEEECEEEE
YKVNYSQYLQLRKERREQQQKAYDEQQKMIAETREFIERFKGTYSKTLQVQSRVKMLEKL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EILEVDEEDTSALRLKFPPSPRSGSYPVTIENVSKAYGDHTVFRNANLMIERGDKIAFVG
HHEECCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHCCCCEEEECCCEEEECCCEEEEEE
KNGEGKSTLVKCIMKEIEHEGTLTLGHNVMIGYFAQNQASLLDENLTVFQTIDDVAQGDI
CCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHH
RNKIKDLLGAFMFGGENSAKKVKVLSGGERTRLAMIKLLLEPVNLLILDEPTNHLDMKTK
HHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH
DILKQALLDFDGTLIVVSHDRDFLDGLVSKVYEFGNQKVTEHLEGIYEFMQRKKMENLRE
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LERKN
HHHCC
>Mature Secondary Structure
MISVDGLTVEFGGSALFSDVSFVINEKDRIALMGKNGAGKSTLLKILAGVREPSRGKVSA
CEEECCEEEEECCCHHHHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCC
PKDTVIAYLPQHLMTEDGRTVFEETAQAFAHLHEMEAEIAELNKQLETRTDYESDSYMEL
CHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
IERVSTLSEKFYSIEEINYDADIEKTLLGLGFKREDFDRQTSEFSGGWRMRIELAKLLLK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHCCCCEEEHHHHHHHHHC
KPDVLLLDEPTNHLDIESIQWLEDFLIDNGQAVVVISHDRAFVDHITTRTIEVTMGRIYD
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHEEEEEECEEEE
YKVNYSQYLQLRKERREQQQKAYDEQQKMIAETREFIERFKGTYSKTLQVQSRVKMLEKL
EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
EILEVDEEDTSALRLKFPPSPRSGSYPVTIENVSKAYGDHTVFRNANLMIERGDKIAFVG
HHEECCCCCCCEEEEECCCCCCCCCCCEEEHHHHHHCCCCEEEECCCEEEECCCEEEEEE
KNGEGKSTLVKCIMKEIEHEGTLTLGHNVMIGYFAQNQASLLDENLTVFQTIDDVAQGDI
CCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHH
RNKIKDLLGAFMFGGENSAKKVKVLSGGERTRLAMIKLLLEPVNLLILDEPTNHLDMKTK
HHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHH
DILKQALLDFDGTLIVVSHDRDFLDGLVSKVYEFGNQKVTEHLEGIYEFMQRKKMENLRE
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LERKN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]