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The map label for this gene is yajL [H]

Identifier: 150008001

GI number: 150008001

Start: 1582543

End: 1583115

Strand: Reverse

Name: yajL [H]

Synonym: BDI_1363

Alternate gene names: 150008001

Gene position: 1583115-1582543 (Counterclockwise)

Preceding gene: 150008002

Following gene: 150007997

Centisome position: 32.9

GC content: 46.42

Gene sequence:

>573_bases
ATGAAAAATGCGGTTGTCTTTTTAGCGACAGGCTTTGAGGAAATAGAGGCCTTGGGTACGATTGATGTCTTGAGGCGTGG
TGGTGTACGGGTTATGATGGTATCTATTACGGGTGACCGATTGGTGATAGGAGCTCATGATATTCCGGTAATGGCTGATT
ATCTGTTCGAGGAGGCGGATTTCAGTTGCGTCGATGCCTTGATCTTGCCGGGTGGAATACCCGGAAGCAACCACTTAAAT
GCGCATGCCCATTTGAAAGAATTAGTCAAGGAGAAAACGGAGGAAGGCGTATTAATCGGTGCTATCTGTGCCGGACCGAT
GGTTTTAGGTGGTCTTGGATTGCTAAAAGGGAAAAGGGCTACCTGTTTTCCTTTCTTCGAGCCAACAATGGTAGGCGCTA
TCCCTACGGATAATGGAGTAGAGCAGGATGGAAATATCATCACAAGCAAGGGGCCGGGTTTTATGTTTGAGTTTGGTTTG
ACGATCTTGAGGAATCTGAAAGACGAGGAAATCGCTTTGGAAGTGGCGGATGCCTTATTATATGACGCTTTGTTGCATGG
GACAAAGCATTAA

Upstream 100 bases:

>100_bases
TCTGGTTCACCTTACCATTGGTTGTTACGGATAAGGCTGTTGTGGAGAAGGATGATCCTTCTGTTTTAAGTGAATGTCAA
CTATATTAAATAAAAAAGAA

Downstream 100 bases:

>100_bases
TGTGCTTGAAATTAAAATCCCTTGAGAGAATGTCTCTAAGACATTCTCTCAAGGGATTTTTGTTGTAAAGAGTTTTCCCT
TTCCTAAATTATTTCTGGAA

Product: ThiJ family intracellular protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKNAVVFLATGFEEIEALGTIDVLRRGGVRVMMVSITGDRLVIGAHDIPVMADYLFEEADFSCVDALILPGGIPGSNHLN
AHAHLKELVKEKTEEGVLIGAICAGPMVLGGLGLLKGKRATCFPFFEPTMVGAIPTDNGVEQDGNIITSKGPGFMFEFGL
TILRNLKDEEIALEVADALLYDALLHGTKH

Sequences:

>Translated_190_residues
MKNAVVFLATGFEEIEALGTIDVLRRGGVRVMMVSITGDRLVIGAHDIPVMADYLFEEADFSCVDALILPGGIPGSNHLN
AHAHLKELVKEKTEEGVLIGAICAGPMVLGGLGLLKGKRATCFPFFEPTMVGAIPTDNGVEQDGNIITSKGPGFMFEFGL
TILRNLKDEEIALEVADALLYDALLHGTKH
>Mature_190_residues
MKNAVVFLATGFEEIEALGTIDVLRRGGVRVMMVSITGDRLVIGAHDIPVMADYLFEEADFSCVDALILPGGIPGSNHLN
AHAHLKELVKEKTEEGVLIGAICAGPMVLGGLGLLKGKRATCFPFFEPTMVGAIPTDNGVEQDGNIITSKGPGFMFEFGL
TILRNLKDEEIALEVADALLYDALLHGTKH

Specific function: Involved in biogenesis of ribosomal proteins, probably as a ribosomal protein-folding chaperone. Interacts with ribosomal subunits, ribosomes and polysomes. Confers resistance to oxidative stress [H]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C56 family [H]

Homologues:

Organism=Homo sapiens, GI183227678, Length=183, Percent_Identity=36.6120218579235, Blast_Score=112, Evalue=2e-25,
Organism=Homo sapiens, GI31543380, Length=183, Percent_Identity=36.6120218579235, Blast_Score=112, Evalue=2e-25,
Organism=Escherichia coli, GI87081736, Length=186, Percent_Identity=34.4086021505376, Blast_Score=85, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17531319, Length=178, Percent_Identity=37.6404494382022, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17558714, Length=175, Percent_Identity=36.5714285714286, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI28571932, Length=181, Percent_Identity=37.5690607734807, Blast_Score=121, Evalue=2e-28,
Organism=Drosophila melanogaster, GI24653499, Length=186, Percent_Identity=37.6344086021505, Blast_Score=112, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006287
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 20304; Mature: 20304

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNAVVFLATGFEEIEALGTIDVLRRGGVRVMMVSITGDRLVIGAHDIPVMADYLFEEAD
CCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHCC
FSCVDALILPGGIPGSNHLNAHAHLKELVKEKTEEGVLIGAICAGPMVLGGLGLLKGKRA
CHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCCC
TCFPFFEPTMVGAIPTDNGVEQDGNIITSKGPGFMFEFGLTILRNLKDEEIALEVADALL
EEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
YDALLHGTKH
HHHHHHCCCC
>Mature Secondary Structure
MKNAVVFLATGFEEIEALGTIDVLRRGGVRVMMVSITGDRLVIGAHDIPVMADYLFEEAD
CCCEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEECCCCHHHHHHHHHHCC
FSCVDALILPGGIPGSNHLNAHAHLKELVKEKTEEGVLIGAICAGPMVLGGLGLLKGKRA
CHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCCC
TCFPFFEPTMVGAIPTDNGVEQDGNIITSKGPGFMFEFGLTILRNLKDEEIALEVADALL
EEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
YDALLHGTKH
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9592144 [H]