Click here to switch to the map view.

The map label for this gene is resD [C]

Identifier: 150007997

GI number: 150007997

Start: 1578017

End: 1578952

Strand: Reverse

Name: resD [C]

Synonym: BDI_1359

Alternate gene names: 150007997

Gene position: 1578952-1578017 (Counterclockwise)

Preceding gene: 150008001

Following gene: 150007996

Centisome position: 32.82

GC content: 48.18

Gene sequence:

>936_bases
ATGAAAAAAGAAGAAGATTTTGTTATGGGCCTGTCCATCTACATGGCTTGTCTGCGTGAGAAAAAACGGTATTCCACGGC
GAAGAGTTATCAAGATGCCTTGAACTCGTTCAAGTGCTTTTGCGGTATGGAGGCGATTCCTTATGCCTATATTAATAGGA
ACAGGCTTTTGTGCTATCAGTCATGGTTGTTGGACAAGGGCCGTTCGTTGAATACGGTGTCTACCTATATGCGTCGGATT
CGTCACATTTATAACTTGGCCGTGGAGGCGAACGAGGCTCCCTTTGTACCCAACCTGTTCAAAGATGTCTTCACGGGCGT
TGAAAGCAAGCGGAAGAAGGCGTTGCCGCGAGAGATGCTGGAGCGTATGTTTAACGCCCCGTTGGAGGATCCGTCCTTGC
GGCGTGTACAGTTGACCGTTCGGTTGATGTTCGCGTTCAGCGGGATAGCGTTTGTGGATCTCACGCATTTGAAATGGGAG
AATATCCGGGATGGGATATTGCAGTATCACCGACAAAAGAGCGGGTCTCTCATACAGCTGGAGATTCCCTCCGGGGCGTT
GCGGCTGTTGGATGAGTTGTCCGCTTGTACGGCAAAGGAATCCCTTTATTTATTTCCTTTTTTGAGTGGAAGGAGAACCG
GTGAGGCGGCCTACAAAGAATATAACAGGACCTTGTCCCGCTTTAACCGTGACTTGAAGTTGTTGGCGAGATCGACAGGC
GTTACGCTTCCGGTCACCTCATATACGATCCGTCATTCATTCGCCTCGTTCTTGAAGGAACAAGATGTATCGATCGAGGT
TATCAGTGAGTTGTTGGGGCATAAGTCTATTAAGACAACACAGATCTATTTGAAGAGCTTCTCGTTGGAACGTTTGTCGA
CAGTGAACCGGAATTGTTTTGAGAGCGTGTGTAAACCGATACCCAAAGTGGGGTAA

Upstream 100 bases:

>100_bases
CGACAAACATAATCGGTCGTAGGTGTTGCTTCATCTGTATAGATTTTATTTACACAGTGTACAAAGGTAGTATTTTTGGC
CTTTTTATTAAGGAGAAGAT

Downstream 100 bases:

>100_bases
GAGGCTTGCTACTTGGGAAGTAGCGTATTCTTTCACGGCGCAAAAGTAATAAAAAATAACAAATAACAAGCAATCATAAG
GCTTAGTTTGTTCATTAGTT

Product: integrase

Products: NA

Alternate protein names: Transposase; Tyrosine Type Site-Specific Recombinase; Tyrosine Site-Specific Recombinase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family; Phage Integrase Family Protein; Site-Specific Recombinase IntIA; Site-Specific Recombinase; Bacteriophage Integrase; Site-Specific Recombinase XerD; Integrase/Recombinase Ripx; Integrase/Site-Specific Recombinase; Tyrosine Recombinase XerD; Recombinase/Integrase; Integrase/Recombinase; Tyrosine Recombinase XerD Subunit; LOW QUALITY PROTEIN Tyrosine Recombinase; Integrase/Transposase

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKKEEDFVMGLSIYMACLREKKRYSTAKSYQDALNSFKCFCGMEAIPYAYINRNRLLCYQSWLLDKGRSLNTVSTYMRRI
RHIYNLAVEANEAPFVPNLFKDVFTGVESKRKKALPREMLERMFNAPLEDPSLRRVQLTVRLMFAFSGIAFVDLTHLKWE
NIRDGILQYHRQKSGSLIQLEIPSGALRLLDELSACTAKESLYLFPFLSGRRTGEAAYKEYNRTLSRFNRDLKLLARSTG
VTLPVTSYTIRHSFASFLKEQDVSIEVISELLGHKSIKTTQIYLKSFSLERLSTVNRNCFESVCKPIPKVG

Sequences:

>Translated_311_residues
MKKEEDFVMGLSIYMACLREKKRYSTAKSYQDALNSFKCFCGMEAIPYAYINRNRLLCYQSWLLDKGRSLNTVSTYMRRI
RHIYNLAVEANEAPFVPNLFKDVFTGVESKRKKALPREMLERMFNAPLEDPSLRRVQLTVRLMFAFSGIAFVDLTHLKWE
NIRDGILQYHRQKSGSLIQLEIPSGALRLLDELSACTAKESLYLFPFLSGRRTGEAAYKEYNRTLSRFNRDLKLLARSTG
VTLPVTSYTIRHSFASFLKEQDVSIEVISELLGHKSIKTTQIYLKSFSLERLSTVNRNCFESVCKPIPKVG
>Mature_311_residues
MKKEEDFVMGLSIYMACLREKKRYSTAKSYQDALNSFKCFCGMEAIPYAYINRNRLLCYQSWLLDKGRSLNTVSTYMRRI
RHIYNLAVEANEAPFVPNLFKDVFTGVESKRKKALPREMLERMFNAPLEDPSLRRVQLTVRLMFAFSGIAFVDLTHLKWE
NIRDGILQYHRQKSGSLIQLEIPSGALRLLDELSACTAKESLYLFPFLSGRRTGEAAYKEYNRTLSRFNRDLKLLARSTG
VTLPVTSYTIRHSFASFLKEQDVSIEVISELLGHKSIKTTQIYLKSFSLERLSTVNRNCFESVCKPIPKVG

Specific function: Acts As A Repressor Of Transcription And As A Site- Specific Resolvase That Cleaves At The Rfsf Site. [C]

COG id: COG4974

COG function: function code L; Site-specific recombinase XerD

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35912; Mature: 35912

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEEDFVMGLSIYMACLREKKRYSTAKSYQDALNSFKCFCGMEAIPYAYINRNRLLCYQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEHHH
SWLLDKGRSLNTVSTYMRRIRHIYNLAVEANEAPFVPNLFKDVFTGVESKRKKALPREML
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHCCHHHHH
ERMFNAPLEDPSLRRVQLTVRLMFAFSGIAFVDLTHLKWENIRDGILQYHRQKSGSLIQL
HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHCCCCEEEE
EIPSGALRLLDELSACTAKESLYLFPFLSGRRTGEAAYKEYNRTLSRFNRDLKLLARSTG
ECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTLPVTSYTIRHSFASFLKEQDVSIEVISELLGHKSIKTTQIYLKSFSLERLSTVNRNCF
CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH
ESVCKPIPKVG
HHHHHHCCCCC
>Mature Secondary Structure
MKKEEDFVMGLSIYMACLREKKRYSTAKSYQDALNSFKCFCGMEAIPYAYINRNRLLCYQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCEEEHHH
SWLLDKGRSLNTVSTYMRRIRHIYNLAVEANEAPFVPNLFKDVFTGVESKRKKALPREML
HHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHCCHHHHH
ERMFNAPLEDPSLRRVQLTVRLMFAFSGIAFVDLTHLKWENIRDGILQYHRQKSGSLIQL
HHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHCCCCEEEE
EIPSGALRLLDELSACTAKESLYLFPFLSGRRTGEAAYKEYNRTLSRFNRDLKLLARSTG
ECCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VTLPVTSYTIRHSFASFLKEQDVSIEVISELLGHKSIKTTQIYLKSFSLERLSTVNRNCF
CEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHH
ESVCKPIPKVG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA