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The map label for this gene is rfbU [H]

Identifier: 150007920

GI number: 150007920

Start: 1491051

End: 1492181

Strand: Direct

Name: rfbU [H]

Synonym: BDI_1281

Alternate gene names: 150007920

Gene position: 1491051-1492181 (Clockwise)

Preceding gene: 150007919

Following gene: 150007921

Centisome position: 30.99

GC content: 45.36

Gene sequence:

>1131_bases
ATGAAGATAGCCATTGAAGCCCAGCGAATTTTCCGTACGAATAAGCACGGGATGGATTTTGTAGCGCTCGAGAGCATTCG
AGAGCTACAGAAAATCGACAAGGAAAATGAATATTTCATATTCGTAAGTCCGGGAGAAGATCATTGCCTAGAAGAAACAA
GCAATACGCACATCGTGGAGGTAAAATGCCCCACCTACCCCCTTTGGGAGCAGGTGGCGTTGCCACGGGCTGTAGCCAAG
ATAAGGCCAGACCTATTGCATTGTACGAGTAACACGGCTCCGATTCATTGCCCCGTCCCATTGGTATTGACCTTGCACGA
CATCATCTTCCTTGAGCCCAAGCAGGGAGGTAATACATCATGGTACCAAAACATGGGTTGGCACTACCGACGTTTAGTAG
TTCCCCGTATACTCCCTAAGTGTAAGAGAATCATTACCGTATCTCATTTTGAACGTGATCGGATTCGAGAGGCCTTATGT
CTGCCCAAAGAACAAATCATGGCGATCTACAATGGATACAGCCAGCATTTTCATCCCCTATCAGGCATATCCGCCATCAC
CCATAAATACATTCATTCGGACGATTACCTTTTCTTCCTAGGAAATACGGACCCTAAGAAAAATGTACCCCGCACCTTGA
AGGCATACAGTCTGTATCTCAAGCGCTCATCAAGAAAGCGTCCTCTATTAATAGCGGACTTACGCGAAGACAAGCTGGAT
ATGATATTGAGAGAGCAGCATATAGAGGAAATCAAGCCTTACCTGTCTTACCCAGGTTACATCTCCAACAAGGATTTGGC
ATACTTGTACAATGGGGCCTTCGTCTTCCTATACACCTCCCTAAGGGAAAGCTTCGGTATCCCCATGCTAGAAGCTATGG
CATGCGGTACACCCGTGATAACGGGGAATACCTCGGCCATGCCTGAGATCGCCGGAAAGGGAGGATTATTGGCAGATCCT
TTCAACGAAGAAGAAGTAGCTTCCTTATTGCTGCGGCTAGAAGAAGATCAAGCATTCCATGATGAACAAATAAAATATGG
ATTACAAAGATCCCGATTATTCTCATGGAATCATACGGCTAGGAAACTATTGCAAGTTTATATGGAAGTCATTCAATCCT
TAAAGAAATGA

Upstream 100 bases:

>100_bases
GCGATCGCCAGTGTTCCCATCCTATTCTTCCTCATGTTCCTAAACACGTTCCGAATAGGGAAAAAGCATACATTCTCTCA
CACCAAACATTCTCCAAATC

Downstream 100 bases:

>100_bases
ATATCAGCGATCTTAAACAAAAGATAAAGAAAAATGACAGATTAAAGAGAACGGTTCATTACTTAATAATGAATCAAAGA
GGCTCTTGCCCTAGATTATG

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKIAIEAQRIFRTNKHGMDFVALESIRELQKIDKENEYFIFVSPGEDHCLEETSNTHIVEVKCPTYPLWEQVALPRAVAK
IRPDLLHCTSNTAPIHCPVPLVLTLHDIIFLEPKQGGNTSWYQNMGWHYRRLVVPRILPKCKRIITVSHFERDRIREALC
LPKEQIMAIYNGYSQHFHPLSGISAITHKYIHSDDYLFFLGNTDPKKNVPRTLKAYSLYLKRSSRKRPLLIADLREDKLD
MILREQHIEEIKPYLSYPGYISNKDLAYLYNGAFVFLYTSLRESFGIPMLEAMACGTPVITGNTSAMPEIAGKGGLLADP
FNEEEVASLLLRLEEDQAFHDEQIKYGLQRSRLFSWNHTARKLLQVYMEVIQSLKK

Sequences:

>Translated_376_residues
MKIAIEAQRIFRTNKHGMDFVALESIRELQKIDKENEYFIFVSPGEDHCLEETSNTHIVEVKCPTYPLWEQVALPRAVAK
IRPDLLHCTSNTAPIHCPVPLVLTLHDIIFLEPKQGGNTSWYQNMGWHYRRLVVPRILPKCKRIITVSHFERDRIREALC
LPKEQIMAIYNGYSQHFHPLSGISAITHKYIHSDDYLFFLGNTDPKKNVPRTLKAYSLYLKRSSRKRPLLIADLREDKLD
MILREQHIEEIKPYLSYPGYISNKDLAYLYNGAFVFLYTSLRESFGIPMLEAMACGTPVITGNTSAMPEIAGKGGLLADP
FNEEEVASLLLRLEEDQAFHDEQIKYGLQRSRLFSWNHTARKLLQVYMEVIQSLKK
>Mature_376_residues
MKIAIEAQRIFRTNKHGMDFVALESIRELQKIDKENEYFIFVSPGEDHCLEETSNTHIVEVKCPTYPLWEQVALPRAVAK
IRPDLLHCTSNTAPIHCPVPLVLTLHDIIFLEPKQGGNTSWYQNMGWHYRRLVVPRILPKCKRIITVSHFERDRIREALC
LPKEQIMAIYNGYSQHFHPLSGISAITHKYIHSDDYLFFLGNTDPKKNVPRTLKAYSLYLKRSSRKRPLLIADLREDKLD
MILREQHIEEIKPYLSYPGYISNKDLAYLYNGAFVFLYTSLRESFGIPMLEAMACGTPVITGNTSAMPEIAGKGGLLADP
FNEEEVASLLLRLEEDQAFHDEQIKYGLQRSRLFSWNHTARKLLQVYMEVIQSLKK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43507; Mature: 43507

Theoretical pI: Translated: 8.27; Mature: 8.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIAIEAQRIFRTNKHGMDFVALESIRELQKIDKENEYFIFVSPGEDHCLEETSNTHIVE
CEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCEEEE
VKCPTYPLWEQVALPRAVAKIRPDLLHCTSNTAPIHCPVPLVLTLHDIIFLEPKQGGNTS
EECCCCCHHHHHHHHHHHHHHCCHHEEECCCCCCEECCCHHHHEEEEEEEECCCCCCCCC
WYQNMGWHYRRLVVPRILPKCKRIITVSHFERDRIREALCLPKEQIMAIYNGYSQHFHPL
HHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHCCCH
SGISAITHKYIHSDDYLFFLGNTDPKKNVPRTLKAYSLYLKRSSRKRPLLIADLREDKLD
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH
MILREQHIEEIKPYLSYPGYISNKDLAYLYNGAFVFLYTSLRESFGIPMLEAMACGTPVI
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEHHHHHHHCCCHHHHHHCCCCEE
TGNTSAMPEIAGKGGLLADPFNEEEVASLLLRLEEDQAFHDEQIKYGLQRSRLFSWNHTA
ECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHH
RKLLQVYMEVIQSLKK
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIAIEAQRIFRTNKHGMDFVALESIRELQKIDKENEYFIFVSPGEDHCLEETSNTHIVE
CEEEEEHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCEEEE
VKCPTYPLWEQVALPRAVAKIRPDLLHCTSNTAPIHCPVPLVLTLHDIIFLEPKQGGNTS
EECCCCCHHHHHHHHHHHHHHCCHHEEECCCCCCEECCCHHHHEEEEEEEECCCCCCCCC
WYQNMGWHYRRLVVPRILPKCKRIITVSHFERDRIREALCLPKEQIMAIYNGYSQHFHPL
HHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHCCCH
SGISAITHKYIHSDDYLFFLGNTDPKKNVPRTLKAYSLYLKRSSRKRPLLIADLREDKLD
HHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH
MILREQHIEEIKPYLSYPGYISNKDLAYLYNGAFVFLYTSLRESFGIPMLEAMACGTPVI
HHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEEEHHHHHHHCCCHHHHHHCCCCEE
TGNTSAMPEIAGKGGLLADPFNEEEVASLLLRLEEDQAFHDEQIKYGLQRSRLFSWNHTA
ECCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHH
RKLLQVYMEVIQSLKK
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]