| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007919
Identifier: 150007919
GI number: 150007919
Start: 1489841
End: 1491067
Strand: Direct
Name: 150007919
Synonym: BDI_1280
Alternate gene names: NA
Gene position: 1489841-1491067 (Clockwise)
Preceding gene: 150007918
Following gene: 150007920
Centisome position: 30.96
GC content: 40.34
Gene sequence:
>1227_bases ATGATTGAGCAATTCTTTCAAATAGGAGAAAATTGGATAGACAAGGAGGAGTATCTATTTCAATTGATAGACGCCATCGT ATTCCTATGTTTTATGGTATGCGTACTGTATTTATTCGTATTCGCCGTTTACTCTAAAAGGAAATCGACTTATAAATACC CTACGACTATGAAAAAATACCGTTTTGCGGCCTTATTTCCGGCCTATGGGGAGGATGAGGTAATTATAGACTCCGTCAAA AGTTTCCTTCAGCAAGACTATCCAAGAGAATTATATGATATTATCGTGATAGCCAACCAAATGCGTCAGGAAACCCTCGA TAGGCTAAAGTCATTATCCGTAAAGATTATAAAAATGGAGAACCCACAAAGTACCAAAATAGAGGCCCTCAAGGCAGCCA TCCGTTACATTGAAGAAGGAAAAACAAAATATGACAACGTGATTATCCTTGACGCCGATAATATCGTAAAAAACAATTAT ATAGAGAAAATAAACGATGCTATTTATGCAGGTTGTTCAGCCATACAGACGCATAGGGTAGCCAAGAACAGAGATAGCAG CATAGCGGTGCTCGACGCCGTTAGCGAGGAGATCAACAACTCTATTTTCAGGAAAGGACATACCCGCCTAGGTTTCTCGT CCGCCTTAAGTGGCTCGGGTATGGCTTTCGAATACGGTCTTTTCAAGAATATCATACAAGGTTGCAACGATATCGGGGAA GATAAGTACATGGAGCGAAAACTGTTACTCCAAAATATATATATCGAATATCTTGAAGATGTCTATACATACGACGAGAA AGTAAGAGGCAAGAAAGACTTCTATAATCAAAGACAGCGCTGGCTTGCCACACAATTCCACAACTTACTCTCAGGGATTC TCCAGATACCGGGAGCACTAATAAAAGGAAATTGGGACTATTGCGATAAATTATTTCAATGGATGATGCCCCCTCGTGTC TTATTGCTAGGGTTTATCACGTTAATTGCCGCCATCCTAAGTCCACTTGATATCATAATCTCCATTAAATGGTGGTTCCT CTTGATATGGCTAGGCATCACTTTTAGCGTAGCGGTTCCAGACTATTTAGTGGACCAAAAATTCAGGAAGGCGATCGCCA GTGTTCCCATCCTATTCTTCCTCATGTTCCTAAACACGTTCCGAATAGGGAAAAAGCATACATTCTCTCACACCAAACAT TCTCCAAATCATGAAGATAGCCATTGA
Upstream 100 bases:
>100_bases ATGGTAATTTCCTTTACGGGACTTACTTTTATAATGGTAGGACCCTATCTAGATCAAGAAATACAAGAAAAAAAATCAAC TGATTCAAATATAAAACACC
Downstream 100 bases:
>100_bases AGCCCAGCGAATTTTCCGTACGAATAAGCACGGGATGGATTTTGTAGCGCTCGAGAGCATTCGAGAGCTACAGAAAATCG ACAAGGAAAATGAATATTTC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Glycosyltransferase Group 2 Family Protein; N-Acetylglucosaminyltransferase; Capsule-Related Protein; Glycosyl Transferase; Group 2 Family Glycosyltransferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Family 2 Protein; Glycoside Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Capsular Polysaccharide Biosynthesis Glycosyl Transferase
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MIEQFFQIGENWIDKEEYLFQLIDAIVFLCFMVCVLYLFVFAVYSKRKSTYKYPTTMKKYRFAALFPAYGEDEVIIDSVK SFLQQDYPRELYDIIVIANQMRQETLDRLKSLSVKIIKMENPQSTKIEALKAAIRYIEEGKTKYDNVIILDADNIVKNNY IEKINDAIYAGCSAIQTHRVAKNRDSSIAVLDAVSEEINNSIFRKGHTRLGFSSALSGSGMAFEYGLFKNIIQGCNDIGE DKYMERKLLLQNIYIEYLEDVYTYDEKVRGKKDFYNQRQRWLATQFHNLLSGILQIPGALIKGNWDYCDKLFQWMMPPRV LLLGFITLIAAILSPLDIIISIKWWFLLIWLGITFSVAVPDYLVDQKFRKAIASVPILFFLMFLNTFRIGKKHTFSHTKH SPNHEDSH
Sequences:
>Translated_408_residues MIEQFFQIGENWIDKEEYLFQLIDAIVFLCFMVCVLYLFVFAVYSKRKSTYKYPTTMKKYRFAALFPAYGEDEVIIDSVK SFLQQDYPRELYDIIVIANQMRQETLDRLKSLSVKIIKMENPQSTKIEALKAAIRYIEEGKTKYDNVIILDADNIVKNNY IEKINDAIYAGCSAIQTHRVAKNRDSSIAVLDAVSEEINNSIFRKGHTRLGFSSALSGSGMAFEYGLFKNIIQGCNDIGE DKYMERKLLLQNIYIEYLEDVYTYDEKVRGKKDFYNQRQRWLATQFHNLLSGILQIPGALIKGNWDYCDKLFQWMMPPRV LLLGFITLIAAILSPLDIIISIKWWFLLIWLGITFSVAVPDYLVDQKFRKAIASVPILFFLMFLNTFRIGKKHTFSHTKH SPNHEDSH >Mature_408_residues MIEQFFQIGENWIDKEEYLFQLIDAIVFLCFMVCVLYLFVFAVYSKRKSTYKYPTTMKKYRFAALFPAYGEDEVIIDSVK SFLQQDYPRELYDIIVIANQMRQETLDRLKSLSVKIIKMENPQSTKIEALKAAIRYIEEGKTKYDNVIILDADNIVKNNY IEKINDAIYAGCSAIQTHRVAKNRDSSIAVLDAVSEEINNSIFRKGHTRLGFSSALSGSGMAFEYGLFKNIIQGCNDIGE DKYMERKLLLQNIYIEYLEDVYTYDEKVRGKKDFYNQRQRWLATQFHNLLSGILQIPGALIKGNWDYCDKLFQWMMPPRV LLLGFITLIAAILSPLDIIISIKWWFLLIWLGITFSVAVPDYLVDQKFRKAIASVPILFFLMFLNTFRIGKKHTFSHTKH SPNHEDSH
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47548; Mature: 47548
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQFFQIGENWIDKEEYLFQLIDAIVFLCFMVCVLYLFVFAVYSKRKSTYKYPTTMKKY CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RFAALFPAYGEDEVIIDSVKSFLQQDYPRELYDIIVIANQMRQETLDRLKSLSVKIIKME HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC NPQSTKIEALKAAIRYIEEGKTKYDNVIILDADNIVKNNYIEKINDAIYAGCSAIQTHRV CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNRDSSIAVLDAVSEEINNSIFRKGHTRLGFSSALSGSGMAFEYGLFKNIIQGCNDIGE HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHHHHCCH DKYMERKLLLQNIYIEYLEDVYTYDEKVRGKKDFYNQRQRWLATQFHNLLSGILQIPGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IKGNWDYCDKLFQWMMPPRVLLLGFITLIAAILSPLDIIISIKWWFLLIWLGITFSVAVP EECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DYLVDQKFRKAIASVPILFFLMFLNTFRIGKKHTFSHTKHSPNHEDSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIEQFFQIGENWIDKEEYLFQLIDAIVFLCFMVCVLYLFVFAVYSKRKSTYKYPTTMKKY CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH RFAALFPAYGEDEVIIDSVKSFLQQDYPRELYDIIVIANQMRQETLDRLKSLSVKIIKME HHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC NPQSTKIEALKAAIRYIEEGKTKYDNVIILDADNIVKNNYIEKINDAIYAGCSAIQTHRV CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKNRDSSIAVLDAVSEEINNSIFRKGHTRLGFSSALSGSGMAFEYGLFKNIIQGCNDIGE HCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEHHHHHHHHHHHHHHCCH DKYMERKLLLQNIYIEYLEDVYTYDEKVRGKKDFYNQRQRWLATQFHNLLSGILQIPGAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IKGNWDYCDKLFQWMMPPRVLLLGFITLIAAILSPLDIIISIKWWFLLIWLGITFSVAVP EECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DYLVDQKFRKAIASVPILFFLMFLNTFRIGKKHTFSHTKHSPNHEDSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA