Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is upp [H]

Identifier: 150007793

GI number: 150007793

Start: 1330475

End: 1331128

Strand: Direct

Name: upp [H]

Synonym: BDI_1151

Alternate gene names: 150007793

Gene position: 1330475-1331128 (Clockwise)

Preceding gene: 150007792

Following gene: 150007804

Centisome position: 27.65

GC content: 45.72

Gene sequence:

>654_bases
ATGAGAATCGTTAATCTTGGAGACACCAATTCCATATTAAACAAGTTCGTAGCCGAACTTAGAGATGTAGATATACAAAA
AGACAGCCTTCGCTTCCGTCGCAATGTCGAGCGTATCGGAGAAATCATGGCTTACGAGATCAGTAAGGAATTTCATTACA
GTACGAAAGACATCCAGTCCCCGCTAGGTATAGCCCCGATGAATACGCCGGACGATCAAATCGTGATTAGTACGATCTTG
CGTGCCGGGCTTCCATTCCACCAAGGTTTCCTTCGGTATCTGGATAATGCGGAGAACGCTTTCGTATCCGCTTACCGCAA
ATATAAAGACCGTTTGAATTTTGATATTCATATCGAATATATCGCCTCTCCTCGCTTAACAGGTAAAACCTTGATCATAT
CCGACCCGATGTTGGCCACCGGAAGTTCTATGGAATTGGCGTATGAGGCCCTGTTGACCAAAGGAGTACCCGGCCATGTA
CACGTAGCCTCCATCATCTCAAGCAAACAAGCCTTGGAATACTTGCAGAAGAAAATGCCGGATGACAAGACTACAATCTG
GATCGCCGCATTAGATAATGACCTCGACGATCATTCTTATATCGTTCCCGGATTAGGCGATGCAGGAGATTTAGCGTTCG
GCGAGAAGGAATAG

Upstream 100 bases:

>100_bases
CATAAGTATGAAATCTTTCATTTATAAGTATGAATGAAAAATTTCATACTTATGATTTTTAGTGTCCGGAAATGATTACT
TTTGGGCTCAAAAAAGACTC

Downstream 100 bases:

>100_bases
GGATGTGTAAACCAAAACGTACTGCCTTTGCCCAACTCGGAATTTACACCGATCCGACCACCTAGTCTATTTACGATGGT
CTCGCAAATAGATAGCCCCA

Product: uracil phosphoribosyltransferase

Products: NA

Alternate protein names: UMP pyrophosphorylase; UPRTase [H]

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQSPLGIAPMNTPDDQIVISTIL
RAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEYIASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHV
HVASIISSKQALEYLQKKMPDDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE

Sequences:

>Translated_217_residues
MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQSPLGIAPMNTPDDQIVISTIL
RAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEYIASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHV
HVASIISSKQALEYLQKKMPDDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE
>Mature_217_residues
MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQSPLGIAPMNTPDDQIVISTIL
RAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEYIASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHV
HVASIISSKQALEYLQKKMPDDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE

Specific function: Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate [H]

COG id: COG0035

COG function: function code F; Uracil phosphoribosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPRTase family [H]

Homologues:

Organism=Escherichia coli, GI87082118, Length=198, Percent_Identity=30.8080808080808, Blast_Score=87, Evalue=6e-19,
Organism=Saccharomyces cerevisiae, GI6321920, Length=140, Percent_Identity=33.5714285714286, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 2580 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: =2.4.2.9 [H]

Molecular weight: Translated: 24375; Mature: 24375

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQS
CEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PLGIAPMNTPDDQIVISTILRAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEY
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEE
IASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHVHVASIISSKQALEYLQKKMP
EECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
DDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE
CCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRIVNLGDTNSILNKFVAELRDVDIQKDSLRFRRNVERIGEIMAYEISKEFHYSTKDIQS
CEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC
PLGIAPMNTPDDQIVISTILRAGLPFHQGFLRYLDNAENAFVSAYRKYKDRLNFDIHIEY
CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEE
IASPRLTGKTLIISDPMLATGSSMELAYEALLTKGVPGHVHVASIISSKQALEYLQKKMP
EECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
DDKTTIWIAALDNDLDDHSYIVPGLGDAGDLAFGEKE
CCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA