| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is mtaD [H]
Identifier: 150007729
GI number: 150007729
Start: 1260793
End: 1262049
Strand: Direct
Name: mtaD [H]
Synonym: BDI_1084
Alternate gene names: 150007729
Gene position: 1260793-1262049 (Clockwise)
Preceding gene: 150007728
Following gene: 150007730
Centisome position: 26.2
GC content: 47.33
Gene sequence:
>1257_bases ATGAGTATATTAATAAAGAATGTCCTGTTTAACGATAAAACGATTGATATCTATATCGAAGGAAAAGAGATCAAGCAAAT AGGAGCGGGGCTGTCCTTTCCTGCCGATAAGATACTGGATGGTAGCCGTAAAGCCGTCATTCCCGGTTTCGTGAACGCTC ATACGCATGCTGCCATGACTTTGTTCCGCGGCTTTGGCGATGATATGCCGCTTATGCCGTGGCTTGAGCAAAAGATCTGG CCGAATGAGGCGAAAATGACCCGTGAGGATGTATATTGGGGAGCGAAATTAGCGTGTTTGGAAATGATAAAAAGTGGCAC GACCACTTTCTTCGACATGTATCAACGCCCTCGTGTCACGGCCGATGTGACGGAAGAGATGGGATTGCGAGGTATCATAG CCGGCGTTTGCTTCGATGGTTTTGATAAAGAAGAGGCGGAGAAATGCAAACGCCATAACGAACGACTGATCCAAGATGTG GATAACTACAGCAAACGGGTTCGCTTCTCGATCGGGCCACACGCTATCTATACCGTTTCCGGTGAGCTTCTGAAATGGGC GCATCAGTTCGCCATGGAACACCAAATCCCTATCCATCTGCATCTGGCAGAGACAGAGGGGGAAGTGAAAGACTCTCTCG ATAGATTCGGACTCACTCCCGTACGTTATTTATATGAGTTAGGTGTGCTTTCTCCACGTTTGATCATCGCTCATGGAATT TACATCGATGATGACGAGCTTCGTATGTTGGCCGATCACGAGGTGAAAGTCGTACATAACCCGGCCTCAAACATGAAACT GGCTTCCGGCATGCATTTTAAGTTCAAGGAAATGCGCCAATTGGGTATTACCGTGGGATTGGGAACGGACGGTTGTTCCT CTTCCAATAACTTGGATATGATCGAGGCGATGAAGCTGGCTTCCCTGTTAGGAAAAGCTTGGCGAAAGGATCCCGAAGCC TTGACCGCAAATGAGATGCTGCAAGCCGCTACTGCGGAAGGAGCCGTTATGTTCGGTTTAAAAGCCGGGCAGATCAAGGA AGGGTATTTAGCCGATCTATGTTTGATAGATCTCAACACCCCCGCTTTTACCCCAAACTTCAATTTCGTCTCAAATCTTG TATACGCCGCCAACGGCAGTTGCGTGGATACCGTTATCTGTGATGGTAAAATATTGATGGAGAATAAGAAGGTACCGGGA GAGGACGAGATTATGGAGAAAGCGGCAGAGATAGCTTATAACTTGATGAAACGTTAA
Upstream 100 bases:
>100_bases CGATCCATTCGCCCAACGAGAGTCAGGAGTTGGATATCTTCTTCAAGGGAATCGAGTCGGTAGCGGAATTCTACCGTTTA TATAAATAAGAAGGAAGAAG
Downstream 100 bases:
>100_bases ATTGATTAAATATGGAAATGATTAAAACCGAACAATATCGGGAAGCGGCCGCCTATTTAGCTAGCCGGATCGAAGGTAAC CCGGAGACCGCCATTATCCT
Product: chlorohydrolase family protein
Products: NA
Alternate protein names: MTA/SAH deaminase [H]
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSILIKNVLFNDKTIDIYIEGKEIKQIGAGLSFPADKILDGSRKAVIPGFVNAHTHAAMTLFRGFGDDMPLMPWLEQKIW PNEAKMTREDVYWGAKLACLEMIKSGTTTFFDMYQRPRVTADVTEEMGLRGIIAGVCFDGFDKEEAEKCKRHNERLIQDV DNYSKRVRFSIGPHAIYTVSGELLKWAHQFAMEHQIPIHLHLAETEGEVKDSLDRFGLTPVRYLYELGVLSPRLIIAHGI YIDDDELRMLADHEVKVVHNPASNMKLASGMHFKFKEMRQLGITVGLGTDGCSSSNNLDMIEAMKLASLLGKAWRKDPEA LTANEMLQAATAEGAVMFGLKAGQIKEGYLADLCLIDLNTPAFTPNFNFVSNLVYAANGSCVDTVICDGKILMENKKVPG EDEIMEKAAEIAYNLMKR
Sequences:
>Translated_418_residues MSILIKNVLFNDKTIDIYIEGKEIKQIGAGLSFPADKILDGSRKAVIPGFVNAHTHAAMTLFRGFGDDMPLMPWLEQKIW PNEAKMTREDVYWGAKLACLEMIKSGTTTFFDMYQRPRVTADVTEEMGLRGIIAGVCFDGFDKEEAEKCKRHNERLIQDV DNYSKRVRFSIGPHAIYTVSGELLKWAHQFAMEHQIPIHLHLAETEGEVKDSLDRFGLTPVRYLYELGVLSPRLIIAHGI YIDDDELRMLADHEVKVVHNPASNMKLASGMHFKFKEMRQLGITVGLGTDGCSSSNNLDMIEAMKLASLLGKAWRKDPEA LTANEMLQAATAEGAVMFGLKAGQIKEGYLADLCLIDLNTPAFTPNFNFVSNLVYAANGSCVDTVICDGKILMENKKVPG EDEIMEKAAEIAYNLMKR >Mature_417_residues SILIKNVLFNDKTIDIYIEGKEIKQIGAGLSFPADKILDGSRKAVIPGFVNAHTHAAMTLFRGFGDDMPLMPWLEQKIWP NEAKMTREDVYWGAKLACLEMIKSGTTTFFDMYQRPRVTADVTEEMGLRGIIAGVCFDGFDKEEAEKCKRHNERLIQDVD NYSKRVRFSIGPHAIYTVSGELLKWAHQFAMEHQIPIHLHLAETEGEVKDSLDRFGLTPVRYLYELGVLSPRLIIAHGIY IDDDELRMLADHEVKVVHNPASNMKLASGMHFKFKEMRQLGITVGLGTDGCSSSNNLDMIEAMKLASLLGKAWRKDPEAL TANEMLQAATAEGAVMFGLKAGQIKEGYLADLCLIDLNTPAFTPNFNFVSNLVYAANGSCVDTVICDGKILMENKKVPGE DEIMEKAAEIAYNLMKR
Specific function: Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine [H]
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTA/SAH deaminase family [H]
Homologues:
Organism=Homo sapiens, GI4758426, Length=332, Percent_Identity=27.710843373494, Blast_Score=107, Evalue=2e-23, Organism=Escherichia coli, GI87082177, Length=431, Percent_Identity=26.4501160092807, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI1789249, Length=373, Percent_Identity=26.2734584450402, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6319963, Length=340, Percent_Identity=26.1764705882353, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI24643849, Length=272, Percent_Identity=29.7794117647059, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 - InterPro: IPR011059 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: =3.5.4.28 [H]
Molecular weight: Translated: 46718; Mature: 46586
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILIKNVLFNDKTIDIYIEGKEIKQIGAGLSFPADKILDGSRKAVIPGFVNAHTHAAMT CCEEEEEHHCCCCEEEEEECCHHHHHHCCCCCCCHHHHCCCCCCEECCCHHCHHHHHHHH LFRGFGDDMPLMPWLEQKIWPNEAKMTREDVYWGAKLACLEMIKSGTTTFFDMYQRPRVT HHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCC ADVTEEMGLRGIIAGVCFDGFDKEEAEKCKRHNERLIQDVDNYSKRVRFSIGPHAIYTVS CHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEC GELLKWAHQFAMEHQIPIHLHLAETEGEVKDSLDRFGLTPVRYLYELGVLSPRLIIAHGI HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECC YIDDDELRMLADHEVKVVHNPASNMKLASGMHFKFKEMRQLGITVGLGTDGCSSSNNLDM EECCCCCEEEECCCEEEEECCCCCCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHH IEAMKLASLLGKAWRKDPEALTANEMLQAATAEGAVMFGLKAGQIKEGYLADLCLIDLNT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCC PAFTPNFNFVSNLVYAANGSCVDTVICDGKILMENKKVPGEDEIMEKAAEIAYNLMKR CCCCCCHHHHHHHHEECCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SILIKNVLFNDKTIDIYIEGKEIKQIGAGLSFPADKILDGSRKAVIPGFVNAHTHAAMT CEEEEEHHCCCCEEEEEECCHHHHHHCCCCCCCHHHHCCCCCCEECCCHHCHHHHHHHH LFRGFGDDMPLMPWLEQKIWPNEAKMTREDVYWGAKLACLEMIKSGTTTFFDMYQRPRVT HHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCC ADVTEEMGLRGIIAGVCFDGFDKEEAEKCKRHNERLIQDVDNYSKRVRFSIGPHAIYTVS CHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEC GELLKWAHQFAMEHQIPIHLHLAETEGEVKDSLDRFGLTPVRYLYELGVLSPRLIIAHGI HHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECC YIDDDELRMLADHEVKVVHNPASNMKLASGMHFKFKEMRQLGITVGLGTDGCSSSNNLDM EECCCCCEEEECCCEEEEECCCCCCEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCHH IEAMKLASLLGKAWRKDPEALTANEMLQAATAEGAVMFGLKAGQIKEGYLADLCLIDLNT HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEEEECCC PAFTPNFNFVSNLVYAANGSCVDTVICDGKILMENKKVPGEDEIMEKAAEIAYNLMKR CCCCCCHHHHHHHHEECCCCEEEEEEECCEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA