Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150007584

Identifier: 150007584

GI number: 150007584

Start: 1084495

End: 1086714

Strand: Direct

Name: 150007584

Synonym: BDI_0937

Alternate gene names: NA

Gene position: 1084495-1086714 (Clockwise)

Preceding gene: 150007582

Following gene: 150007586

Centisome position: 22.54

GC content: 47.16

Gene sequence:

>2220_bases
ATGAAAAGATTTCTGATGATGATGACCTTGATAGGGCTTGTGGGAAACTGGAACTCGACGTTGACCGCCCAACTCGTCTC
TCCCGATTCATTGTATTTGAACGAGGACTTACCCGAGATAAACATTGTCGCCGTGAAACCCTTGATAAAGGCGGAGGCGG
ATAAGACTACTTACAGTATCGCCGAGGACCCGGATTCCAGAACCTATACCCTGCTGGAGATGTTGCGGAAAGTCCCTCTA
GTGACCGTGGATGGCGAGGATAACGTGAAGGTAAACGGACAATCCAGTTTTAAGATTTATATGAATGGGCGTCCCTCGAA
TATGTTCTCCAATAATCCCAAGGAGGTCTTGCGTAGTATCCCCGCCAGCATGATCAAGAAAGTGGAGGTGATAACAGATC
CCGGTGCCCGTTACGATGCGGAGGGTGTCAGCGGAATCTTGAATATCGTGACGAAAGGAGCGGAGTTCGAGGGATATAAC
GCGAGTATAAACACTACGGTGATGAACTTATTTAAGAGTGTCGGTGGTTTCGCTACGCTGAAATATGGCCGATTATCGCT
TTCCGGAAATTATACGTTTAGCCAACAATCGTCCGAGAGCGAGTCGGATTATCTCCGTACTCAGTCGGGAGACGGTGGGA
AGCTCCGGATGCTCTCAGACGTAGACGTGAAATATCCGGCTCATTATGGAAGTCTGGAAGGCAGTTTCGAGATCGATACA
TTGAATTTAATCTCCTTGTCCGGAAACTTGAATATCGGAAACAGCAACTCTATTTGGAATAGCCATTATAGCAGGCTTGA
TAAAGAGGGGGAAGAAATCTATGCTTATAACGAGGATATGAGTAAAAAGAACGAATGGGGTAGCGCCTCCTTAAAAGCGG
ATTATCAGCGTTTATTCAAACGAAATAAGGAAGAGATGCTAACGCTTTCCTATCAGTATGATTATATCCCGAACGATATC
TATAGCGTGTTTTACGATAAGGATAAGATGGGTAATGTCTCGTTACCCCAACTGGAGGCCGATTATACCCGGCAAATCAG
TCATGCCCGCACCCATGAGCATACGGCCCAGCTTGATTACGTGAATCCTTTTACAAGTATACATTCCATCGAGGGAGGTT
TGAAGCTGATTCGGCGTAGCAGTACGAGCCACGCTACTTCGGAGGTAAAGGAGTTGGGTGAGGGTGTCTGGTTACCCGCA
GATTTACAGCCTTTGGTGGAATATCGGCATGTGCAGAATATATGCTCCGCCTATGCGGGATATGGATTTAAGTATGGTAA
ATGGAGCTTGAACCCCGGCATTCGTATGGAACATACTTGGCAGGACGTGACTTATAAACAAGGCGAAGGCAAGGATTTTA
ATTATCGTGTAACGGATTGGGTTCCTTCTTGGACCTCCGCTTTCCGCTTGGATGACCGGAGTTTGTTTCGCTTGGCTTAC
AACTTACGTTTACGTCGCCCGAATATCAGCTATTTGAATCCTACGGTGTTCGTGTCTGGGACCTCTATCTCGTATGGAAA
TCCGGGATTGGTATCGGAGAAACATCATCGTCTTTCGGCGTCATACAGTTATTACGGAACGAAATTGAATGTGCAAGCTT
CCGTGCTCTGCACCTTGGGAAAAGGGGTGATTGATGAGTATCTGTTCATTGATTCGGCGAATGTGGTGAATAGTACGTAT
GATAATCTCGTGGACGTGAAAGCAGCGGGAGGAAACCTTTATCTAAGCTATAATCCTTCGCCCCGGACAAGCGTGTCGCT
GAACAGCATGTTGCATTATCTGGATTTACGGGCGCAGGAGGGGAATGAGGTTTACGATACGGATGTGCGTAATTCCGGCT
TTTGTGGCTCTGCTTTTGTCGATTTCTCGCAGAAGTTTAAGTACGGGTGGCGTTTTGTCCTGTCGGGTGGGTACGTGCGT
TCCGAGCCGAATGTGGGGATGGACTCGTACGGCTTTTATTTTTACGGCTTGAGTGTGGTAAAGAGCTTCTTGAAGGATAA
ATTGACTTGTACGCTGCGGGCGCAAGATTTTCTGGGAGATCATAAGACGATACAGATTAACGAGCGATATCCGGACTTTC
ATATCCGGCAGACCGAGCGTATGTTTAGTCGTGGTTTCGGCATCGCCATTAGCTACCGGATCGGTGATTTAAAAGCGAGC
GTGAAGAAGGCGGGGAGAAGCATAAGGAATGATGATCTGTTGGACGCCCTAGATAAGTAG

Upstream 100 bases:

>100_bases
AATGTCATGGAAATGTCAGCTACTTATCCGGCGATTATTTACGTTGTCGTTGTCTGTTGCCTCTACTTTTGCCCGAAAAC
AAATCAAATAAGATACAGAT

Downstream 100 bases:

>100_bases
GGCGGGCACAGGCCCGCTCCCTACGGTATCATAACTCGTCCAGCCATTTCTTGCCGGGCTTCGTGTAAAGCCAAGCGATA
AATAAACCTGTAATAACTCC

Product: putative TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor Plug; Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Exported Protein; NB Dependent Receptor; NB-Dependent Receptor Domain-Containing Protein; Outer Membrane Receptor Family Transporter; NB Dependent/Ligand-Gated Channel; Nb-Dependent Outer Membrane Receptor; Outer Membrane Receptor For Ferrienterochelin And Colicin; Protein Containing nB-Dependent Receptor Plug Domain

Number of amino acids: Translated: 739; Mature: 739

Protein sequence:

>739_residues
MKRFLMMMTLIGLVGNWNSTLTAQLVSPDSLYLNEDLPEINIVAVKPLIKAEADKTTYSIAEDPDSRTYTLLEMLRKVPL
VTVDGEDNVKVNGQSSFKIYMNGRPSNMFSNNPKEVLRSIPASMIKKVEVITDPGARYDAEGVSGILNIVTKGAEFEGYN
ASINTTVMNLFKSVGGFATLKYGRLSLSGNYTFSQQSSESESDYLRTQSGDGGKLRMLSDVDVKYPAHYGSLEGSFEIDT
LNLISLSGNLNIGNSNSIWNSHYSRLDKEGEEIYAYNEDMSKKNEWGSASLKADYQRLFKRNKEEMLTLSYQYDYIPNDI
YSVFYDKDKMGNVSLPQLEADYTRQISHARTHEHTAQLDYVNPFTSIHSIEGGLKLIRRSSTSHATSEVKELGEGVWLPA
DLQPLVEYRHVQNICSAYAGYGFKYGKWSLNPGIRMEHTWQDVTYKQGEGKDFNYRVTDWVPSWTSAFRLDDRSLFRLAY
NLRLRRPNISYLNPTVFVSGTSISYGNPGLVSEKHHRLSASYSYYGTKLNVQASVLCTLGKGVIDEYLFIDSANVVNSTY
DNLVDVKAAGGNLYLSYNPSPRTSVSLNSMLHYLDLRAQEGNEVYDTDVRNSGFCGSAFVDFSQKFKYGWRFVLSGGYVR
SEPNVGMDSYGFYFYGLSVVKSFLKDKLTCTLRAQDFLGDHKTIQINERYPDFHIRQTERMFSRGFGIAISYRIGDLKAS
VKKAGRSIRNDDLLDALDK

Sequences:

>Translated_739_residues
MKRFLMMMTLIGLVGNWNSTLTAQLVSPDSLYLNEDLPEINIVAVKPLIKAEADKTTYSIAEDPDSRTYTLLEMLRKVPL
VTVDGEDNVKVNGQSSFKIYMNGRPSNMFSNNPKEVLRSIPASMIKKVEVITDPGARYDAEGVSGILNIVTKGAEFEGYN
ASINTTVMNLFKSVGGFATLKYGRLSLSGNYTFSQQSSESESDYLRTQSGDGGKLRMLSDVDVKYPAHYGSLEGSFEIDT
LNLISLSGNLNIGNSNSIWNSHYSRLDKEGEEIYAYNEDMSKKNEWGSASLKADYQRLFKRNKEEMLTLSYQYDYIPNDI
YSVFYDKDKMGNVSLPQLEADYTRQISHARTHEHTAQLDYVNPFTSIHSIEGGLKLIRRSSTSHATSEVKELGEGVWLPA
DLQPLVEYRHVQNICSAYAGYGFKYGKWSLNPGIRMEHTWQDVTYKQGEGKDFNYRVTDWVPSWTSAFRLDDRSLFRLAY
NLRLRRPNISYLNPTVFVSGTSISYGNPGLVSEKHHRLSASYSYYGTKLNVQASVLCTLGKGVIDEYLFIDSANVVNSTY
DNLVDVKAAGGNLYLSYNPSPRTSVSLNSMLHYLDLRAQEGNEVYDTDVRNSGFCGSAFVDFSQKFKYGWRFVLSGGYVR
SEPNVGMDSYGFYFYGLSVVKSFLKDKLTCTLRAQDFLGDHKTIQINERYPDFHIRQTERMFSRGFGIAISYRIGDLKAS
VKKAGRSIRNDDLLDALDK
>Mature_739_residues
MKRFLMMMTLIGLVGNWNSTLTAQLVSPDSLYLNEDLPEINIVAVKPLIKAEADKTTYSIAEDPDSRTYTLLEMLRKVPL
VTVDGEDNVKVNGQSSFKIYMNGRPSNMFSNNPKEVLRSIPASMIKKVEVITDPGARYDAEGVSGILNIVTKGAEFEGYN
ASINTTVMNLFKSVGGFATLKYGRLSLSGNYTFSQQSSESESDYLRTQSGDGGKLRMLSDVDVKYPAHYGSLEGSFEIDT
LNLISLSGNLNIGNSNSIWNSHYSRLDKEGEEIYAYNEDMSKKNEWGSASLKADYQRLFKRNKEEMLTLSYQYDYIPNDI
YSVFYDKDKMGNVSLPQLEADYTRQISHARTHEHTAQLDYVNPFTSIHSIEGGLKLIRRSSTSHATSEVKELGEGVWLPA
DLQPLVEYRHVQNICSAYAGYGFKYGKWSLNPGIRMEHTWQDVTYKQGEGKDFNYRVTDWVPSWTSAFRLDDRSLFRLAY
NLRLRRPNISYLNPTVFVSGTSISYGNPGLVSEKHHRLSASYSYYGTKLNVQASVLCTLGKGVIDEYLFIDSANVVNSTY
DNLVDVKAAGGNLYLSYNPSPRTSVSLNSMLHYLDLRAQEGNEVYDTDVRNSGFCGSAFVDFSQKFKYGWRFVLSGGYVR
SEPNVGMDSYGFYFYGLSVVKSFLKDKLTCTLRAQDFLGDHKTIQINERYPDFHIRQTERMFSRGFGIAISYRIGDLKAS
VKKAGRSIRNDDLLDALDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83423; Mature: 83423

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFLMMMTLIGLVGNWNSTLTAQLVSPDSLYLNEDLPEINIVAVKPLIKAEADKTTYSI
CHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCEEEEEECHHHHCCCCCCEEEE
AEDPDSRTYTLLEMLRKVPLVTVDGEDNVKVNGQSSFKIYMNGRPSNMFSNNPKEVLRSI
CCCCCCCHHHHHHHHHHCCEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHC
PASMIKKVEVITDPGARYDAEGVSGILNIVTKGAEFEGYNASINTTVMNLFKSVGGFATL
CHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEE
KYGRLSLSGNYTFSQQSSESESDYLRTQSGDGGKLRMLSDVDVKYPAHYGSLEGSFEIDT
EECEEEECCCEEECCCCCCCCHHHHCCCCCCCCEEEEEECCCEECCCCCCCCCCCEEEEE
LNLISLSGNLNIGNSNSIWNSHYSRLDKEGEEIYAYNEDMSKKNEWGSASLKADYQRLFK
EEEEEEECCEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
RNKEEMLTLSYQYDYIPNDIYSVFYDKDKMGNVSLPQLEADYTRQISHARTHEHTAQLDY
CCCCCEEEEEEEECCCCCHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCHHCEECC
VNPFTSIHSIEGGLKLIRRSSTSHATSEVKELGEGVWLPADLQPLVEYRHVQNICSAYAG
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
YGFKYGKWSLNPGIRMEHTWQDVTYKQGEGKDFNYRVTDWVPSWTSAFRLDDRSLFRLAY
CCEEECEEECCCCCEEEECCCCCEEECCCCCCCCEEEECCCCCCHHHEECCCHHHHEEEE
NLRLRRPNISYLNPTVFVSGTSISYGNPGLVSEKHHRLSASYSYYGTKLNVQASVLCTLG
EEEEECCCCCEECCEEEEECCEECCCCCCCCCCHHHHEECEEEEECEEEEEEEEEEEECC
KGVIDEYLFIDSANVVNSTYDNLVDVKAAGGNLYLSYNPSPRTSVSLNSMLHYLDLRAQE
HHHHHHEEEEECCHHHHHHHHCEEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHCCCCC
GNEVYDTDVRNSGFCGSAFVDFSQKFKYGWRFVLSGGYVRSEPNVGMDSYGFYFYGLSVV
CCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCHHHHHHHHH
KSFLKDKLTCTLRAQDFLGDHKTIQINERYPDFHIRQTERMFSRGFGIAISYRIGDLKAS
HHHHHCCEEEEEEEHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHH
VKKAGRSIRNDDLLDALDK
HHHHCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKRFLMMMTLIGLVGNWNSTLTAQLVSPDSLYLNEDLPEINIVAVKPLIKAEADKTTYSI
CHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCEEEEEECHHHHCCCCCCEEEE
AEDPDSRTYTLLEMLRKVPLVTVDGEDNVKVNGQSSFKIYMNGRPSNMFSNNPKEVLRSI
CCCCCCCHHHHHHHHHHCCEEEECCCCCEEECCCCEEEEEECCCCCCCCCCCHHHHHHHC
PASMIKKVEVITDPGARYDAEGVSGILNIVTKGAEFEGYNASINTTVMNLFKSVGGFATL
CHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEE
KYGRLSLSGNYTFSQQSSESESDYLRTQSGDGGKLRMLSDVDVKYPAHYGSLEGSFEIDT
EECEEEECCCEEECCCCCCCCHHHHCCCCCCCCEEEEEECCCEECCCCCCCCCCCEEEEE
LNLISLSGNLNIGNSNSIWNSHYSRLDKEGEEIYAYNEDMSKKNEWGSASLKADYQRLFK
EEEEEEECCEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
RNKEEMLTLSYQYDYIPNDIYSVFYDKDKMGNVSLPQLEADYTRQISHARTHEHTAQLDY
CCCCCEEEEEEEECCCCCHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCHHCEECC
VNPFTSIHSIEGGLKLIRRSSTSHATSEVKELGEGVWLPADLQPLVEYRHVQNICSAYAG
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
YGFKYGKWSLNPGIRMEHTWQDVTYKQGEGKDFNYRVTDWVPSWTSAFRLDDRSLFRLAY
CCEEECEEECCCCCEEEECCCCCEEECCCCCCCCEEEECCCCCCHHHEECCCHHHHEEEE
NLRLRRPNISYLNPTVFVSGTSISYGNPGLVSEKHHRLSASYSYYGTKLNVQASVLCTLG
EEEEECCCCCEECCEEEEECCEECCCCCCCCCCHHHHEECEEEEECEEEEEEEEEEEECC
KGVIDEYLFIDSANVVNSTYDNLVDVKAAGGNLYLSYNPSPRTSVSLNSMLHYLDLRAQE
HHHHHHEEEEECCHHHHHHHHCEEEEEECCCEEEEEECCCCCCEEEHHHHHHHHHCCCCC
GNEVYDTDVRNSGFCGSAFVDFSQKFKYGWRFVLSGGYVRSEPNVGMDSYGFYFYGLSVV
CCEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCCCHHHHHHHHH
KSFLKDKLTCTLRAQDFLGDHKTIQINERYPDFHIRQTERMFSRGFGIAISYRIGDLKAS
HHHHHCCEEEEEEEHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHH
VKKAGRSIRNDDLLDALDK
HHHHCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA