Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150007466

Identifier: 150007466

GI number: 150007466

Start: 963425

End: 965233

Strand: Reverse

Name: 150007466

Synonym: BDI_0817

Alternate gene names: NA

Gene position: 965233-963425 (Counterclockwise)

Preceding gene: 150007469

Following gene: 150007465

Centisome position: 20.06

GC content: 43.12

Gene sequence:

>1809_bases
ATGAACAAGATTAGTATATACGCATTGACGTTCTTTTTAAGTTTATCGAGCGTAACCGTTTATTCCCAAAAGAATAATAA
GCAAGTTATTTTTACTAACGAACAAGGGAGCGATATATTTTATCATACCATCGAACGCGGACAAACCGTATACGCCATAG
CGACCATGTATGGCGTAAGCGTAGAGGATATTTATCGGTTGAATCCGGAAAGTAAAGAAGGGATCAAGGCCGGTTCTACG
TTAAGAATCCCGCAGAAGGACTCCGCTATCGCACCTTCCGGCAAAGCAGATAACTATACATACCATACGATCCAGCCGAA
AGAGACCTTGTACTCTTTATCCATTAAATATTCAGTGCCCGCCACGGATATTATCGCCGCCAATCCGGGTCTCTCCACAT
CGACCTTTACGATTGGCAAGAATATCCGGATCCCGCCGACACGACTGGAAACCTTGCCTACTACGGAAAAAAAGACCGTA
CAGAAGGAAATGGAATATACCATACAGAAAAAAGAGACCATGTACCGTATCTGCCGGAAGTTCGATATTTCCAGCGTGGA
GCTTTTAAGACTCAACCCCGAGCTGAAAAACGGAGTGAAAGCGGGCATGGTTATCAAGATACCGGTAGCCAGTGAAGAAG
TGATCACCCAAAACATAAGACAGCCGGAAGAGCGTGAGGTGAACGCCCTCCTCTCTACTCCTAAAGATATAAAGAAGGTG
AACCGTATCCAAGTCGCCTTATTGTTGCCGTTCATGACGAACGAGACAACGCAATCATCCGCAACCTCCCGTTTCGTGGA
ATATTACGAGGGATTGCTATTGGCGGTCGACAGCTTACGAAATATGGGAACCTCTATCGAGCTATCGGTATATGATACTG
GAAACGGTACGAAGAAAGTCAAGGAGATATTGAAAGAAGATGCGTTATCAAACGCTAATTTGATCATTGGTGCCGTACAG
AACGACCAAATCGGATTGATCGCAGATTTCGCTCAAAAGCACAATATCAAATACGTGATCCCTTTCACCTCCAAGAATGA
TGATGTCTTGTCAAACGCGAATGTTTATCAAGTAAACACACCTCATTCCTATTTATACTCCAAGGCGGCACAAGCCGGAT
GCGATTTATTCTCGGATTACAATATCATACTTGTCAATATAAAGGATAAAGAAGAAAAGCCGGAATTTATCAAAGCCTTC
AAGACGGAGATGCAGCAACGCGATATCCCGTTCAAGGAAGTAACTTATAAAGGGGATACTTTCGCCACGGATATAGAGGC
AGCCATGGTAAGGGACAAGCGGAATGTGGTATTGCCAACCTCCGCCTCCTTAGATGCGGTGAATAAGATCAAGGCACCGC
TCCGTATGCTTTCCGAGTTGAAAGAGGAGGAGAAAGAGCCTTATATGGTCAACCTATTCGGTTATCCGGAATGGCAGACC
TATACAAGAGAGTGTCTGGAGGACTTCTACGCATTGAACACCTATATCTATAGTAATTTCTATGCGGACAACTTATCTCC
GGAAGTCCATAGCTTTTATTCCGATTATAAAAACTGGTATAGCAAGAATTTAATCAACACATTCCCGAAATATGGAATCC
TAGGCTTTGACACGGGTATGTATTTCCTAGGTGCCATCAATAAATATGGCTCGAACTTCGAGAATAATCTAGACAAGATC
CATTATAAGAGCATCCAGACCGGATTCGATTTCCATAGAGTGAATAATTGGGGCGGTTTTATCAATACGAACTTGTTTAT
TGTACATTACAAGAATGATTATACGGTAACCCGCAGTGAGGTAAGATAA

Upstream 100 bases:

>100_bases
AGTCTAAAAATTACGGTTCCAAAATTAGGGAAATAAAAGGACATACGTAGCATGATAAGCAAAATTCACTATCTTTGTCA
CAAAATACTCCGAACAGCAA

Downstream 100 bases:

>100_bases
TTGATATGATGACGAAAAAGATATTTGTAGCGATATTTCTGTGCATGGCAAGCTTATCGATTTGCCATGCGCAGAAAAGT
ACTTTTAAGCAAGAGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM-Repeat Protein; LysM Domain-Containing Proteins; Peptidase M; LysM-Repeat Domain Protein; LysM Repeat-Containing Protein; LysM-Repeat Domain-Containing Protein; NLP/P60 Protein; LysM-Repeat-Containing Protein

Number of amino acids: Translated: 602; Mature: 602

Protein sequence:

>602_residues
MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVSVEDIYRLNPESKEGIKAGST
LRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVPATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTV
QKEMEYTIQKKETMYRICRKFDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV
NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKVKEILKEDALSNANLIIGAVQ
NDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNTPHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAF
KTEMQQRDIPFKEVTYKGDTFATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT
YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGMYFLGAINKYGSNFENNLDKI
HYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSEVR

Sequences:

>Translated_602_residues
MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVSVEDIYRLNPESKEGIKAGST
LRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVPATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTV
QKEMEYTIQKKETMYRICRKFDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV
NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKVKEILKEDALSNANLIIGAVQ
NDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNTPHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAF
KTEMQQRDIPFKEVTYKGDTFATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT
YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGMYFLGAINKYGSNFENNLDKI
HYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSEVR
>Mature_602_residues
MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVSVEDIYRLNPESKEGIKAGST
LRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVPATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTV
QKEMEYTIQKKETMYRICRKFDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV
NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKVKEILKEDALSNANLIIGAVQ
NDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNTPHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAF
KTEMQQRDIPFKEVTYKGDTFATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT
YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGMYFLGAINKYGSNFENNLDKI
HYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSEVR

Specific function: Unknown

COG id: COG3858

COG function: function code R; Predicted glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68645; Mature: 68645

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVS
CCCEEEEHHEEHHHHHEEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEEEHHCCC
VEDIYRLNPESKEGIKAGSTLRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVP
HHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECHHHEEEEEEEEEECC
ATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTVQKEMEYTIQKKETMYRICRK
CCEEEECCCCCCCCEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV
CCCCCEEEEEECCHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKV
HHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHH
KEILKEDALSNANLIIGAVQNDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNT
HHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHCCCEEEEEECCCCCCCCCCCCEEEECC
PHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAFKTEMQQRDIPFKEVTYKGDT
CHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCC
FATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT
CHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGM
HHHHHHHHHHHHHHHHEECEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH
YFLGAINKYGSNFENNLDKIHYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSE
HHHHHHHHHCCCHHCCHHHEEHHHHHCCCCEEEECCCCCEEECCEEEEEECCCEEEECCC
VR
CC
>Mature Secondary Structure
MNKISIYALTFFLSLSSVTVYSQKNNKQVIFTNEQGSDIFYHTIERGQTVYAIATMYGVS
CCCEEEEHHEEHHHHHEEEEEEECCCCEEEEECCCCCCEEEEECCCCCEEEEEEEHHCCC
VEDIYRLNPESKEGIKAGSTLRIPQKDSAIAPSGKADNYTYHTIQPKETLYSLSIKYSVP
HHHHEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECHHHEEEEEEEEEECC
ATDIIAANPGLSTSTFTIGKNIRIPPTRLETLPTTEKKTVQKEMEYTIQKKETMYRICRK
CCEEEECCCCCCCCEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FDISSVELLRLNPELKNGVKAGMVIKIPVASEEVITQNIRQPEEREVNALLSTPKDIKKV
CCCCCEEEEEECCHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
NRIQVALLLPFMTNETTQSSATSRFVEYYEGLLLAVDSLRNMGTSIELSVYDTGNGTKKV
HHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHH
KEILKEDALSNANLIIGAVQNDQIGLIADFAQKHNIKYVIPFTSKNDDVLSNANVYQVNT
HHHHHHHCCCCCCEEEEEECCCCEEEEEHHHHHCCCEEEEEECCCCCCCCCCCCEEEECC
PHSYLYSKAAQAGCDLFSDYNIILVNIKDKEEKPEFIKAFKTEMQQRDIPFKEVTYKGDT
CHHHHHHHHHHHCCHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCC
FATDIEAAMVRDKRNVVLPTSASLDAVNKIKAPLRMLSELKEEEKEPYMVNLFGYPEWQT
CHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
YTRECLEDFYALNTYIYSNFYADNLSPEVHSFYSDYKNWYSKNLINTFPKYGILGFDTGM
HHHHHHHHHHHHHHHHEECEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHH
YFLGAINKYGSNFENNLDKIHYKSIQTGFDFHRVNNWGGFINTNLFIVHYKNDYTVTRSE
HHHHHHHHHCCCHHCCHHHEEHHHHHCCCCEEEECCCCCEEECCEEEEEECCCEEEECCC
VR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA