| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is exuT [C]
Identifier: 150007409
GI number: 150007409
Start: 888175
End: 889590
Strand: Reverse
Name: exuT [C]
Synonym: BDI_0760
Alternate gene names: 150007409
Gene position: 889590-888175 (Counterclockwise)
Preceding gene: 150007410
Following gene: 150007408
Centisome position: 18.49
GC content: 48.73
Gene sequence:
>1416_bases ATGATAGAAAAAATTCATCAGAAACTAAGCGACTCGAAAGTCGCACGCTGGAGTGTACTCGCTTTGGCGGCATTCACGAT GCTTTGCGGATACTTCCTTACGGATGTAATGGCTCCGCTTAAACCGATGTTGGAAGAACAGCTAAGCTGGACGAGTACGG AATATGGTTGGTTCACCAGCGCTTACGGCTGGTTCAACGTATTTCTCTTCATGTTGATCATTGGTGGTATCGTTCTGGAT AAGATGGGTGTCCGTTTCACGGGTGTCGCTTCCTGTATCTTGATGATTATCGGTTGTTCCATTAAATATTACGCCATCTC GGATGCGTTTACGATGGAAGGAGAGCTTTTCGGATGGAAAGCGCAAGTGATGGTGGCCGCCCTCGGATACGCGATCTTCG GTGTCGGCGTGGAGACCGCCGGTATCACGGTATCTAAGATTATCGTACGGTGGTTCAAGGGAAAAGAGATGGCGTTGGCT ATGGGCTTGGAGATGGCTACGGCTCGTTTGGGTACGGCCTTGGCTTTATCTATCACGGTTCCCGCCGCCAAGTACTTCGG TAGTATCTCCGCTCCTATCTTGCTTTGTCTTTGTATGTTGTGTATCGGTTTGATCGCCTTCCTCGTATTTTGCGTGATGG ATCGCAAGCTGGACGCTTCGATGGACGCTATCGAGCAAGCCGAGGAGGAAGAGCCTTTCCGTTTGAAAGATATCTTATTG ATCGTTACCAATAAGGGTTTCTGGTTGATCGCTCTGCTTTGCGTATTATTCTATTCGGCCGTATTCCCCTTCTTGAAATA CGCTACGGACTTGATGGTCAATAAATATAACGTAGATCCGGAGTTGGCGGGAAATATCCCGGCTATCTTACCTTTCGGCA CGATTCTTCTGACTCCGTTCTTCGGTAATTTATACGACCGCAAGGGTAAAGGGGCGACGATCATGATCTTTGGCGCCTTG ATGTTGATCGGCGTGCATTTATTATTCACGCTTCCGATCTTGAATCAGTGGTGGTTCGCCACGATCGTGATGATCGTATT GGGTATCGCTTTCTCCTTGGTCCCATCGGCGATGTGGCCATCTGTTCCGAAGATTATCCCGGAGAAGCAATTAGGCACGG CTTATGCCTTGATTTTCTGGGTACAGAATATCGGTCTGAGTATGGTTCCCTTATTAATCGGCTGGATATTGGATACGTAT TGCAAGATCGACAATGGTACGGGCAAACCGGCTTACGACTATACGATACCGATGGCAGTCTTCACCTGCTTCGGTGTACT CGCCCTCTTCATCGCCTTGATGTTGAAACGTGAGGACCGGATCAAAGGCTACGGCCTTGAATTGCCGAACATCCAAAAGG ACGCCGATAAAGCCGAGGCCGAGATAATCGCTAAAGAGATGATCGCGGAGCCTTAA
Upstream 100 bases:
>100_bases TGATCTTTATCGGAGGCAGTACGTTTATCGTAGCGGACGCTCTCCCCTTGTTCATGAAAGAAGACGAATACAAATAATAT AACTCTATAAAACAAATATC
Downstream 100 bases:
>100_bases TAAAGCTCATAACCCTAAATAAATGGAAGGCGCTGTAAACTTGATTTACTGCGCCTTTCTTTTTGATGACTGAAAACCAT CGTCATTGGAACACACAAAA
Product: putative oxalate:formate antiporter
Products: galacturonate [Cytoplasm]; Proton [Cytoplasm]; glucuronate [Cytoplasm] [C]
Alternate protein names: None
Number of amino acids: Translated: 471; Mature: 471
Protein sequence:
>471_residues MIEKIHQKLSDSKVARWSVLALAAFTMLCGYFLTDVMAPLKPMLEEQLSWTSTEYGWFTSAYGWFNVFLFMLIIGGIVLD KMGVRFTGVASCILMIIGCSIKYYAISDAFTMEGELFGWKAQVMVAALGYAIFGVGVETAGITVSKIIVRWFKGKEMALA MGLEMATARLGTALALSITVPAAKYFGSISAPILLCLCMLCIGLIAFLVFCVMDRKLDASMDAIEQAEEEEPFRLKDILL IVTNKGFWLIALLCVLFYSAVFPFLKYATDLMVNKYNVDPELAGNIPAILPFGTILLTPFFGNLYDRKGKGATIMIFGAL MLIGVHLLFTLPILNQWWFATIVMIVLGIAFSLVPSAMWPSVPKIIPEKQLGTAYALIFWVQNIGLSMVPLLIGWILDTY CKIDNGTGKPAYDYTIPMAVFTCFGVLALFIALMLKREDRIKGYGLELPNIQKDADKAEAEIIAKEMIAEP
Sequences:
>Translated_471_residues MIEKIHQKLSDSKVARWSVLALAAFTMLCGYFLTDVMAPLKPMLEEQLSWTSTEYGWFTSAYGWFNVFLFMLIIGGIVLD KMGVRFTGVASCILMIIGCSIKYYAISDAFTMEGELFGWKAQVMVAALGYAIFGVGVETAGITVSKIIVRWFKGKEMALA MGLEMATARLGTALALSITVPAAKYFGSISAPILLCLCMLCIGLIAFLVFCVMDRKLDASMDAIEQAEEEEPFRLKDILL IVTNKGFWLIALLCVLFYSAVFPFLKYATDLMVNKYNVDPELAGNIPAILPFGTILLTPFFGNLYDRKGKGATIMIFGAL MLIGVHLLFTLPILNQWWFATIVMIVLGIAFSLVPSAMWPSVPKIIPEKQLGTAYALIFWVQNIGLSMVPLLIGWILDTY CKIDNGTGKPAYDYTIPMAVFTCFGVLALFIALMLKREDRIKGYGLELPNIQKDADKAEAEIIAKEMIAEP >Mature_471_residues MIEKIHQKLSDSKVARWSVLALAAFTMLCGYFLTDVMAPLKPMLEEQLSWTSTEYGWFTSAYGWFNVFLFMLIIGGIVLD KMGVRFTGVASCILMIIGCSIKYYAISDAFTMEGELFGWKAQVMVAALGYAIFGVGVETAGITVSKIIVRWFKGKEMALA MGLEMATARLGTALALSITVPAAKYFGSISAPILLCLCMLCIGLIAFLVFCVMDRKLDASMDAIEQAEEEEPFRLKDILL IVTNKGFWLIALLCVLFYSAVFPFLKYATDLMVNKYNVDPELAGNIPAILPFGTILLTPFFGNLYDRKGKGATIMIFGAL MLIGVHLLFTLPILNQWWFATIVMIVLGIAFSLVPSAMWPSVPKIIPEKQLGTAYALIFWVQNIGLSMVPLLIGWILDTY CKIDNGTGKPAYDYTIPMAVFTCFGVLALFIALMLKREDRIKGYGLELPNIQKDADKAEAEIIAKEMIAEP
Specific function: Aldohexuronate Transport System. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI269847416, Length=384, Percent_Identity=28.3854166666667, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI269847422, Length=285, Percent_Identity=29.8245614035088, Blast_Score=131, Evalue=1e-30, Organism=Drosophila melanogaster, GI21356765, Length=399, Percent_Identity=26.8170426065163, Blast_Score=161, Evalue=8e-40, Organism=Drosophila melanogaster, GI28574037, Length=377, Percent_Identity=26.525198938992, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI281364404, Length=377, Percent_Identity=26.525198938992, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52134; Mature: 52134
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEKIHQKLSDSKVARWSVLALAAFTMLCGYFLTDVMAPLKPMLEEQLSWTSTEYGWFTS CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AYGWFNVFLFMLIIGGIVLDKMGVRFTGVASCILMIIGCSIKYYAISDAFTMEGELFGWK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCHH AQVMVAALGYAIFGVGVETAGITVSKIIVRWFKGKEMALAMGLEMATARLGTALALSITV HHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEC PAAKYFGSISAPILLCLCMLCIGLIAFLVFCVMDRKLDASMDAIEQAEEEEPFRLKDILL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEE IVTNKGFWLIALLCVLFYSAVFPFLKYATDLMVNKYNVDPELAGNIPAILPFGTILLTPF EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH FGNLYDRKGKGATIMIFGALMLIGVHLLFTLPILNQWWFATIVMIVLGIAFSLVPSAMWP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVPKIIPEKQLGTAYALIFWVQNIGLSMVPLLIGWILDTYCKIDNGTGKPAYDYTIPMAV CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH FTCFGVLALFIALMLKREDRIKGYGLELPNIQKDADKAEAEIIAKEMIAEP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIEKIHQKLSDSKVARWSVLALAAFTMLCGYFLTDVMAPLKPMLEEQLSWTSTEYGWFTS CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH AYGWFNVFLFMLIIGGIVLDKMGVRFTGVASCILMIIGCSIKYYAISDAFTMEGELFGWK HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCHH AQVMVAALGYAIFGVGVETAGITVSKIIVRWFKGKEMALAMGLEMATARLGTALALSITV HHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEC PAAKYFGSISAPILLCLCMLCIGLIAFLVFCVMDRKLDASMDAIEQAEEEEPFRLKDILL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEEEE IVTNKGFWLIALLCVLFYSAVFPFLKYATDLMVNKYNVDPELAGNIPAILPFGTILLTPF EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHH FGNLYDRKGKGATIMIFGALMLIGVHLLFTLPILNQWWFATIVMIVLGIAFSLVPSAMWP HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SVPKIIPEKQLGTAYALIFWVQNIGLSMVPLLIGWILDTYCKIDNGTGKPAYDYTIPMAV CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH FTCFGVLALFIALMLKREDRIKGYGLELPNIQKDADKAEAEIIAKEMIAEP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: galacturonate [Periplasm]; Proton [Periplasm]; glucuronate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + galacturonate [Periplasm] = galacturonate [Cytoplasm] + Proton [Cytoplasm] Proton [Periplasm] + glucuronate [Periplasm] = Proton [Cytoplasm] + glucuronate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA