| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150007408
Identifier: 150007408
GI number: 150007408
Start: 886624
End: 887730
Strand: Reverse
Name: 150007408
Synonym: BDI_0759
Alternate gene names: NA
Gene position: 887730-886624 (Counterclockwise)
Preceding gene: 150007409
Following gene: 150007395
Centisome position: 18.45
GC content: 53.03
Gene sequence:
>1107_bases ATGAGGAGTACCTTTCGAGTTCTGTTCTACACCAAGAACCAGGCCATAAAAAATGGCCGTGTCCCTGTCATGGGGCGTAT TACCGTCAACGGAACGACGGCGAGTTTCAGCTGCAAGCGTGATGTTCCCCTTGCCCTTTGGGATGCCAAAGGCAACTGTG CCAAAGGCAAATCCGAGGAGGCAAGACGGCTGAACCGGGAGCTGGAGAACATCAAGGCACAGATCGGCAAGCACTATCAA TATCTCTCGGACCACGATTCGTTCCTGACAGCCAAGAAGGTCTATGACCGCTATAACGGCTTTGGCGAGGAGATCCATTC GTTGATGGAGATCTTCAATATCCAGATCCGGGATTACAAACGGCAGATCGGCAAGACGAAAGCCCAAAGCACCTACCGGG GGTTGGTGGACGAGTACAAGTGTCTGTCCTGTTACCTGAAGGACAAGTTGGGTACGGAGGATATCCCCCTGATGTCGCTG GACATGGATTTCATCAAGAACTATTACAACTGGATGCTTTCCGTGCGCGGGCTGGCCAAGTCAACGGCCTTCGAGCGCGT CAACACACTGAAATGGCTGATGTATCTGGCAATGGACGAGGGATGGATCCACAAGCACCCGTTCAAGAAGTTCGTGTGCA AGCCGGAATACAAGAAACGTCCTTTCCTCTCGGAGGAGGACCTGCAACGCGTTATCAGCGTCAAGCTGAGCTACAGGCGG CAGCAGGCCATCCGGGACATGTTTGTTTTCATGTGCTTCAGCGGCCTGGCCCATGCCGACCTGAAGGAACTTTCTTACCG GAATGTCCACACGGATTCGGACGGGAACACCTGGCTGGTTGGAAACCGTGTGAAGACCAAGGCACCCTATGTTGTCAAGC TGCTCCCGATAGCCGTCGAGCTGATCGAGAAATACAGGGGGGTGAACGAATTCAAGGTTTCTCCGGACAGGGTGTTCCCC GTGGGGGAAATAGGGAGTATGGAGGACAGTCTGAAACGTATCGGCGAGAAGGCCGGCTGCAGTGTCCGCGTCAGCCCGCA TGTCGGAAGGCATAGCGATTTTTCTTTCTTGCTAAGATACAATGTATTACAATATATTTCGGCTTGA
Upstream 100 bases:
>100_bases AACAGACAATATAAGCAGTTATTTTTCAATTGTTTGCATTATTCTTCATAGCTTAAAACAACTCGATAAATAGTAATTTT GTAACAAAAATAATCGAGTT
Downstream 100 bases:
>100_bases TAGGTAACGATTTAGAAACCAGCGAAATTCCGTGTTTTACCTCGTTTTGCAGTAATTCAAAAGAACGCTTTTTCTAAATG CAAAGGTAATATTATTATTT
Product: putative phage integrase
Products: NA
Alternate protein names: Tyrosine Type Site-Specific Recombinase; Transposase; Integrase Family Protein; Site-Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Bacteriophage Integrase; Phage Integrase Family Protein; Phage Integrase; Integrase Protein; Integrase/Transposase
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MRSTFRVLFYTKNQAIKNGRVPVMGRITVNGTTASFSCKRDVPLALWDAKGNCAKGKSEEARRLNRELENIKAQIGKHYQ YLSDHDSFLTAKKVYDRYNGFGEEIHSLMEIFNIQIRDYKRQIGKTKAQSTYRGLVDEYKCLSCYLKDKLGTEDIPLMSL DMDFIKNYYNWMLSVRGLAKSTAFERVNTLKWLMYLAMDEGWIHKHPFKKFVCKPEYKKRPFLSEEDLQRVISVKLSYRR QQAIRDMFVFMCFSGLAHADLKELSYRNVHTDSDGNTWLVGNRVKTKAPYVVKLLPIAVELIEKYRGVNEFKVSPDRVFP VGEIGSMEDSLKRIGEKAGCSVRVSPHVGRHSDFSFLLRYNVLQYISA
Sequences:
>Translated_368_residues MRSTFRVLFYTKNQAIKNGRVPVMGRITVNGTTASFSCKRDVPLALWDAKGNCAKGKSEEARRLNRELENIKAQIGKHYQ YLSDHDSFLTAKKVYDRYNGFGEEIHSLMEIFNIQIRDYKRQIGKTKAQSTYRGLVDEYKCLSCYLKDKLGTEDIPLMSL DMDFIKNYYNWMLSVRGLAKSTAFERVNTLKWLMYLAMDEGWIHKHPFKKFVCKPEYKKRPFLSEEDLQRVISVKLSYRR QQAIRDMFVFMCFSGLAHADLKELSYRNVHTDSDGNTWLVGNRVKTKAPYVVKLLPIAVELIEKYRGVNEFKVSPDRVFP VGEIGSMEDSLKRIGEKAGCSVRVSPHVGRHSDFSFLLRYNVLQYISA >Mature_368_residues MRSTFRVLFYTKNQAIKNGRVPVMGRITVNGTTASFSCKRDVPLALWDAKGNCAKGKSEEARRLNRELENIKAQIGKHYQ YLSDHDSFLTAKKVYDRYNGFGEEIHSLMEIFNIQIRDYKRQIGKTKAQSTYRGLVDEYKCLSCYLKDKLGTEDIPLMSL DMDFIKNYYNWMLSVRGLAKSTAFERVNTLKWLMYLAMDEGWIHKHPFKKFVCKPEYKKRPFLSEEDLQRVISVKLSYRR QQAIRDMFVFMCFSGLAHADLKELSYRNVHTDSDGNTWLVGNRVKTKAPYVVKLLPIAVELIEKYRGVNEFKVSPDRVFP VGEIGSMEDSLKRIGEKAGCSVRVSPHVGRHSDFSFLLRYNVLQYISA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42708; Mature: 42708
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTFRVLFYTKNQAIKNGRVPVMGRITVNGTTASFSCKRDVPLALWDAKGNCAKGKSEE CCCEEEEEEEECCCHHCCCCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCHH ARRLNRELENIKAQIGKHYQYLSDHDSFLTAKKVYDRYNGFGEEIHSLMEIFNIQIRDYK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RQIGKTKAQSTYRGLVDEYKCLSCYLKDKLGTEDIPLMSLDMDFIKNYYNWMLSVRGLAK HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH STAFERVNTLKWLMYLAMDEGWIHKHPFKKFVCKPEYKKRPFLSEEDLQRVISVKLSYRR HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QQAIRDMFVFMCFSGLAHADLKELSYRNVHTDSDGNTWLVGNRVKTKAPYVVKLLPIAVE HHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCEEEECCCEECCCCHHHHHHHHHHH LIEKYRGVNEFKVSPDRVFPVGEIGSMEDSLKRIGEKAGCSVRVSPHVGRHSDFSFLLRY HHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH NVLQYISA HHHHHHCC >Mature Secondary Structure MRSTFRVLFYTKNQAIKNGRVPVMGRITVNGTTASFSCKRDVPLALWDAKGNCAKGKSEE CCCEEEEEEEECCCHHCCCCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCHH ARRLNRELENIKAQIGKHYQYLSDHDSFLTAKKVYDRYNGFGEEIHSLMEIFNIQIRDYK HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH RQIGKTKAQSTYRGLVDEYKCLSCYLKDKLGTEDIPLMSLDMDFIKNYYNWMLSVRGLAK HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHH STAFERVNTLKWLMYLAMDEGWIHKHPFKKFVCKPEYKKRPFLSEEDLQRVISVKLSYRR HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH QQAIRDMFVFMCFSGLAHADLKELSYRNVHTDSDGNTWLVGNRVKTKAPYVVKLLPIAVE HHHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCEEEECCCEECCCCHHHHHHHHHHH LIEKYRGVNEFKVSPDRVFPVGEIGSMEDSLKRIGEKAGCSVRVSPHVGRHSDFSFLLRY HHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH NVLQYISA HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA