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The map label for this gene is ycgA [H]

Identifier: 150007112

GI number: 150007112

Start: 525223

End: 526806

Strand: Reverse

Name: ycgA [H]

Synonym: BDI_0456

Alternate gene names: 150007112

Gene position: 526806-525223 (Counterclockwise)

Preceding gene: 150007113

Following gene: 150007109

Centisome position: 10.95

GC content: 44.76

Gene sequence:

>1584_bases
ATGAAAAAGAGACAAATACCCCACACTTACGTAATCATTTTTTACATCATCTTATTTTGCGCCGCATTGACATGGGTTAT
CCCCGGTGGGCAATACACGGAAAATATCAGCCCAGATGGAGAGCGGACCGTTGTATATGAATCCGTGGAAAGCGTACCTC
AAACATGGGAGGTACTCTCCGCCTTTTATAAAGGATTTGTGGACAAGGCGGATATCATCGTCTTCATCCTCATCATCGGT
GGTGCATTCTGGATCGTGAACGACAGTAAGGCATTTGATATCGGGACAGTCAGTTTCCTACGAAAAGCACGCAAAATGGA
GAACAACCCCATCCTTCGTAAAATAGGCATAGATAATTTCTTATTGACCGCCATCATGCTACTTTTCAGTATATTCGGGG
CCGTATTCGGGATGAGTGAGGAGACCATCGCTTTTTGTCTGGTCTTGGTCCCGATGGCGATATCTATGGGATACGATTCC
ATAACCGGCGTATGTATGGTTTTTATAGCGGCGGGATTAGGTTTCGCCGGAGCGATTTTAAACCCTTTCACTATCGGTAT
AGCGCAAGGCTTAGCAGGAATTCCTCTTTTTTCCGGCATCGAGTATCGTATCGTTTGTTGGTGTATTATCAATGTGGTAG
GCTTCACATGGATATTGCGTTATGCCGCCAAGGTAAAAAAGAACCCTCAACTATCGCCCGTCTATGAGGATGATCAATAT
TGGAGAGATTTGCATAGTACCAATTCCTTAGAAATCGTATACAGAACCCCGAAAGCCGCATGGATCAGTTTCGTCCTATT
GGCAATCGTACTAGTTATCTTTTCGATCTATTACCCCCAGACATCCTTAAAAATAGGAAATAGCGTAATCAAGGGACTAC
CCTTAATCCCGATTCTTAGCGTAGCTTTCGTGATCAGCTCGATATTTACCCTACGGAAAACCGTACATTTGTATATATTG
AACCTTTTATTCTTCACGATCTTTTTCTTGATAACAGGCGTAATGGGCTATGGGTGGTACATTATGGAAATAGCGACCTT
GTTCTTCGCCTTGGGTATAGCGGCGGGAATCGCCAATGGACGCAATCCGAATGAGCTTGTGAAACTTTTCTTGGAAGGTT
GCAAGGATATCATGAGCGCCGCCTTGGTTGTCGGCTTAGCTGGAGGTATTATCGTAATCCTGCAAGACGGTAAAGTGATC
GATACGATTCTCTTTAACCTAGCGAAAGGGATGGAAGGTTTGGGACAAGTAGCTACGGTCGGGATGATGTACGTTATTCA
AACGCTTATCAATTTAGTTATTCCTTCCGGAAGTGCCAAAGCGGCCCTCACCATGCCTATCATGGCCCCATTCTCGGAGT
TGATCGGTTTATCCAAGCAGGCCACCGTCATGGCCTTTCAGTTTGGCGATGGCTTCACGAACCTGATAACTCCCACATCT
GGTGTTCTGATAGCGGTTCTAGGAGTAAGCCGTATTCCGTATGATAAATGGTTCAAATGGGCATGGAAATTCATCCTTGT
CCTAGTGATCCTAGGATTCCTATTATTGATCCCAACGGTATTGATCCCGATGAACGGCTTTTAA

Upstream 100 bases:

>100_bases
AACGTAAACTCAAAGACGTAGATACGCTTAGCGACCGTGAGGCCCGAGCTATCCTTCCCGAGATCGGAATATTAACTGAA
GAAGACGAAAAAGCAGAATC

Downstream 100 bases:

>100_bases
TCGATATAGCTTTGCGCCTTCCGCAATAGGCTTCCGTGATCCATCACGCCGGAAGAGCGCCATATGATCTCACCTTTCTT
AAAGATGATCAAAGTGGGTA

Product: putative C4-dicarboxylate anaerobic carrier

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 527

Protein sequence:

>527_residues
MKKRQIPHTYVIIFYIILFCAALTWVIPGGQYTENISPDGERTVVYESVESVPQTWEVLSAFYKGFVDKADIIVFILIIG
GAFWIVNDSKAFDIGTVSFLRKARKMENNPILRKIGIDNFLLTAIMLLFSIFGAVFGMSEETIAFCLVLVPMAISMGYDS
ITGVCMVFIAAGLGFAGAILNPFTIGIAQGLAGIPLFSGIEYRIVCWCIINVVGFTWILRYAAKVKKNPQLSPVYEDDQY
WRDLHSTNSLEIVYRTPKAAWISFVLLAIVLVIFSIYYPQTSLKIGNSVIKGLPLIPILSVAFVISSIFTLRKTVHLYIL
NLLFFTIFFLITGVMGYGWYIMEIATLFFALGIAAGIANGRNPNELVKLFLEGCKDIMSAALVVGLAGGIIVILQDGKVI
DTILFNLAKGMEGLGQVATVGMMYVIQTLINLVIPSGSAKAALTMPIMAPFSELIGLSKQATVMAFQFGDGFTNLITPTS
GVLIAVLGVSRIPYDKWFKWAWKFILVLVILGFLLLIPTVLIPMNGF

Sequences:

>Translated_527_residues
MKKRQIPHTYVIIFYIILFCAALTWVIPGGQYTENISPDGERTVVYESVESVPQTWEVLSAFYKGFVDKADIIVFILIIG
GAFWIVNDSKAFDIGTVSFLRKARKMENNPILRKIGIDNFLLTAIMLLFSIFGAVFGMSEETIAFCLVLVPMAISMGYDS
ITGVCMVFIAAGLGFAGAILNPFTIGIAQGLAGIPLFSGIEYRIVCWCIINVVGFTWILRYAAKVKKNPQLSPVYEDDQY
WRDLHSTNSLEIVYRTPKAAWISFVLLAIVLVIFSIYYPQTSLKIGNSVIKGLPLIPILSVAFVISSIFTLRKTVHLYIL
NLLFFTIFFLITGVMGYGWYIMEIATLFFALGIAAGIANGRNPNELVKLFLEGCKDIMSAALVVGLAGGIIVILQDGKVI
DTILFNLAKGMEGLGQVATVGMMYVIQTLINLVIPSGSAKAALTMPIMAPFSELIGLSKQATVMAFQFGDGFTNLITPTS
GVLIAVLGVSRIPYDKWFKWAWKFILVLVILGFLLLIPTVLIPMNGF
>Mature_527_residues
MKKRQIPHTYVIIFYIILFCAALTWVIPGGQYTENISPDGERTVVYESVESVPQTWEVLSAFYKGFVDKADIIVFILIIG
GAFWIVNDSKAFDIGTVSFLRKARKMENNPILRKIGIDNFLLTAIMLLFSIFGAVFGMSEETIAFCLVLVPMAISMGYDS
ITGVCMVFIAAGLGFAGAILNPFTIGIAQGLAGIPLFSGIEYRIVCWCIINVVGFTWILRYAAKVKKNPQLSPVYEDDQY
WRDLHSTNSLEIVYRTPKAAWISFVLLAIVLVIFSIYYPQTSLKIGNSVIKGLPLIPILSVAFVISSIFTLRKTVHLYIL
NLLFFTIFFLITGVMGYGWYIMEIATLFFALGIAAGIANGRNPNELVKLFLEGCKDIMSAALVVGLAGGIIVILQDGKVI
DTILFNLAKGMEGLGQVATVGMMYVIQTLINLVIPSGSAKAALTMPIMAPFSELIGLSKQATVMAFQFGDGFTNLITPTS
GVLIAVLGVSRIPYDKWFKWAWKFILVLVILGFLLLIPTVLIPMNGF

Specific function: Unknown

COG id: COG1288

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yfcC and H.influenzae HI_0594 [H]

Homologues:

Organism=Escherichia coli, GI87082082, Length=277, Percent_Identity=34.2960288808664, Blast_Score=159, Evalue=5e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018387
- InterPro:   IPR018385 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 58010; Mature: 58010

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]