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The map label for this gene is rmuC [H]

Identifier: 150007113

GI number: 150007113

Start: 526803

End: 528074

Strand: Reverse

Name: rmuC [H]

Synonym: BDI_0457

Alternate gene names: 150007113

Gene position: 528074-526803 (Counterclockwise)

Preceding gene: 150007117

Following gene: 150007112

Centisome position: 10.98

GC content: 47.09

Gene sequence:

>1272_bases
ATGGATTGGATTATTATCGGCGGACTTCTTATAATCATCGTGACGCAAATCCTTTTGCGTCCTAAACAGCTAAATAATAA
CAAAGAAGACCTAGAAAAGTTACTAAACGAGATACAACGCTCGTTCGACCGTATCGAGAAAAACTTTAGGGAGGACTTCC
GCCTGAACCGGGAAGAAAGCCGGTTAGTAGCAAAAGATAACCGAGAAGAGCTGGCTCGTTCCATGAATGAGTTCAAGGAA
GCCTTCGAACGTGGAATCGATTCTTTTAACAGGTTGCAGAAAGAGAAATTCGCCGCCTTGGACGAACGCCAACAGAGATT
AGTGGATAACACGGAAAAAAGGCTGGAAGAGATCCGAGTCACCGTAGACGAGAAACTTCAAAAGACATTGAATGACCGTA
TCGGGCAATCTTTCCGTTTAGTCACCGAACAATTAGAAAGTGTACAAAAAGGACTGGGCGAGATGCAAACCTTAGCACAG
GATGTAGGAGGATTAAAACGGGTACTTAGTAATGTTAAGACCCGGGGAAATATCGGGGAGATCCAACTCAGTATGTTATT
GGAGCAGTTATTGGCACCAGAGCAATACGAGGCGAATGTACATACCCGGAAAGGTTCGGATGCGGTCGTTGAATTCGCAG
TCAAGCTCCCCGGGCGGGATGATGCCCGAGAATTCGTATACCTTCCCATAGACGCTAAATTCCCGAAAGATGTATACGAA
CAGCTCCTAGACGCTTACGATGCCGCAGATTCCCAAGCGATCGAGACAGCCGGAAAATTATTGGAGACAACGATCAAGAA
GATGGCTAAAGATATTTCGGACAAATATCTGGCACCTCCCGCCACGACCGATTTCGGCATTATGTTCCTGCCGTTCGAGG
GCATTTACGCCGAGGTCGTACGCCGTTCCGCTTTATTGGAGGACTTGCAACGAAACTACAAGGTAGTCGTAACAGGTCCC
ACTACCCTAGCGGCCATACTAAACAGTTTACAAATGGGCTTCCGTACATTGGCGATTCAAAAGCACTCAGGGGAGGTATG
GACGATCTTAGGGGCCGTGAAAAAAGAATTCGAGAAAGTAGGCGGTATGCTCGAGAAAGCCCAAAAGAACTTGCAAACCG
CCAGCGGGCAAATAGAAGAGGTTTTAGGTACCCGTACCCGTGCCATCCAACGTAAACTCAAAGACGTAGATACGCTTAGC
GACCGTGAGGCCCGAGCTATCCTTCCCGAGATCGGAATATTAACTGAAGAAGACGAAAAAGCAGAATCATGA

Upstream 100 bases:

>100_bases
ATAAAACAAACGAAAATAAACAATGTTTTTTCATTTAACTCTATTTAACTACTGTTGCAAAATACAGATTACCTATCTTT
GACGTCAAAATTAAAAACAG

Downstream 100 bases:

>100_bases
AAAAGAGACAAATACCCCACACTTACGTAATCATTTTTTACATCATCTTATTTTGCGCCGCATTGACATGGGTTATCCCC
GGTGGGCAATACACGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MDWIIIGGLLIIIVTQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREESRLVAKDNREELARSMNEFKE
AFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRVTVDEKLQKTLNDRIGQSFRLVTEQLESVQKGLGEMQTLAQ
DVGGLKRVLSNVKTRGNIGEIQLSMLLEQLLAPEQYEANVHTRKGSDAVVEFAVKLPGRDDAREFVYLPIDAKFPKDVYE
QLLDAYDAADSQAIETAGKLLETTIKKMAKDISDKYLAPPATTDFGIMFLPFEGIYAEVVRRSALLEDLQRNYKVVVTGP
TTLAAILNSLQMGFRTLAIQKHSGEVWTILGAVKKEFEKVGGMLEKAQKNLQTASGQIEEVLGTRTRAIQRKLKDVDTLS
DREARAILPEIGILTEEDEKAES

Sequences:

>Translated_423_residues
MDWIIIGGLLIIIVTQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREESRLVAKDNREELARSMNEFKE
AFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRVTVDEKLQKTLNDRIGQSFRLVTEQLESVQKGLGEMQTLAQ
DVGGLKRVLSNVKTRGNIGEIQLSMLLEQLLAPEQYEANVHTRKGSDAVVEFAVKLPGRDDAREFVYLPIDAKFPKDVYE
QLLDAYDAADSQAIETAGKLLETTIKKMAKDISDKYLAPPATTDFGIMFLPFEGIYAEVVRRSALLEDLQRNYKVVVTGP
TTLAAILNSLQMGFRTLAIQKHSGEVWTILGAVKKEFEKVGGMLEKAQKNLQTASGQIEEVLGTRTRAIQRKLKDVDTLS
DREARAILPEIGILTEEDEKAES
>Mature_423_residues
MDWIIIGGLLIIIVTQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREESRLVAKDNREELARSMNEFKE
AFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRVTVDEKLQKTLNDRIGQSFRLVTEQLESVQKGLGEMQTLAQ
DVGGLKRVLSNVKTRGNIGEIQLSMLLEQLLAPEQYEANVHTRKGSDAVVEFAVKLPGRDDAREFVYLPIDAKFPKDVYE
QLLDAYDAADSQAIETAGKLLETTIKKMAKDISDKYLAPPATTDFGIMFLPFEGIYAEVVRRSALLEDLQRNYKVVVTGP
TTLAAILNSLQMGFRTLAIQKHSGEVWTILGAVKKEFEKVGGMLEKAQKNLQTASGQIEEVLGTRTRAIQRKLKDVDTLS
DREARAILPEIGILTEEDEKAES

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 48154; Mature: 48154

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWIIIGGLLIIIVTQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREES
CCEEHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RLVAKDNREELARSMNEFKEAFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDEKLQKTLNDRIGQSFRLVTEQLESVQKGLGEMQTLAQDVGGLKRVLSNVKTRGNIGE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IQLSMLLEQLLAPEQYEANVHTRKGSDAVVEFAVKLPGRDDAREFVYLPIDAKFPKDVYE
HHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH
QLLDAYDAADSQAIETAGKLLETTIKKMAKDISDKYLAPPATTDFGIMFLPFEGIYAEVV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHH
RRSALLEDLQRNYKVVVTGPTTLAAILNSLQMGFRTLAIQKHSGEVWTILGAVKKEFEKV
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
GGMLEKAQKNLQTASGQIEEVLGTRTRAIQRKLKDVDTLSDREARAILPEIGILTEEDEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHC
AES
CCC
>Mature Secondary Structure
MDWIIIGGLLIIIVTQILLRPKQLNNNKEDLEKLLNEIQRSFDRIEKNFREDFRLNREES
CCEEHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RLVAKDNREELARSMNEFKEAFERGIDSFNRLQKEKFAALDERQQRLVDNTEKRLEEIRV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVDEKLQKTLNDRIGQSFRLVTEQLESVQKGLGEMQTLAQDVGGLKRVLSNVKTRGNIGE
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
IQLSMLLEQLLAPEQYEANVHTRKGSDAVVEFAVKLPGRDDAREFVYLPIDAKFPKDVYE
HHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH
QLLDAYDAADSQAIETAGKLLETTIKKMAKDISDKYLAPPATTDFGIMFLPFEGIYAEVV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHH
RRSALLEDLQRNYKVVVTGPTTLAAILNSLQMGFRTLAIQKHSGEVWTILGAVKKEFEKV
HHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHH
GGMLEKAQKNLQTASGQIEEVLGTRTRAIQRKLKDVDTLSDREARAILPEIGILTEEDEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHC
AES
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]