| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is ttgG [H]
Identifier: 150007001
GI number: 150007001
Start: 384843
End: 385868
Strand: Reverse
Name: ttgG [H]
Synonym: BDI_0337
Alternate gene names: 150007001
Gene position: 385868-384843 (Counterclockwise)
Preceding gene: 150007002
Following gene: 150007000
Centisome position: 8.02
GC content: 49.42
Gene sequence:
>1026_bases ATGAAGACAAGTCAAATGCTGAAAGTAATACCGATAGCTACATTGGCCCTGCTGATGTCTTGCTCGGGTAATAAGAGTGA GGAAGCCACGGAAACACAGAATGAGAAAGTAAAGGTGAAAGTGGAGACGGTCTCTGTTCAAGACGTGGAGCAACTCAGTG AATTTACCGCTACGGTGGAAGCGAATATCAAAAATAATATCGCTCCCCAAACCCCATTCCGTATCGAGAAAATCTTCGCC GAGGTAGGCGACCATGTAAAAGCCGGGCAGTTATTAGCCAAGATGGACGCTACCAGCCTAAAGCAAGCGAAGATACAATT GGACAACCAAGAGATCGAGTTCAAACGTATCGACGAGTTGTATAAGGTAGGTGGTGCTTCCAAATCCGCTTGGGATGCCC AAAAGACTTCCTTGGAAGTGGCTCGAGAGACGTATAAAAACTTGGTGGAGAACACCCAATTGCTAAGCCCGATCAGCGGA ATCGTAACCGCCCGCAACTACGATAGCGGCGATATGTACAGCGGCGGAAACCCAATCTACACAGTGGAGGAAATCCGTCC GGTCAAATTAATGGTGAATGTCTCCGAGAGTCTTTTTACGAAAGTGAAGAAAGGCCATGAGGTAGATATCCGGCTGGATG TGTACGGAGACGAGGTTTTCAAGGGTAAAGTCAACTTGGTTTATCCGACGATCGATCCCGCTACCCGCACGTTCCCCGTG GAGATCAAGATCGCCAACTCGGATGAGCGAGTGCGACCGGGTATGTTCGCCCGGGTGACGATGAGTTTCGGCCATATGGA TCACGTGGTGGCCCCGGATCGCTCTATCGTAAAACAATCAGGTGCCGGCGACCGGTATATCTATGTATGCAAAGACGGTA AGGTCTCCTACCAGAAGGTGAAGCTAGGACGCCGTATGGGTGATAAATATGAGATCATATCCGGAGTGGAGGATGGCGAC CAAGTGGTTATCACCGGGCAAAGCCGCCTGACGAACGGTATGGAAGTTGAAATCGAAAACGAATAA
Upstream 100 bases:
>100_bases ATGGTAGCGAAGGCGGATCTGGAGAAAGTATTGGGTAACGAACAGATGAATTGAAAATTAAAAATTGAAAGTTTAATAGA TAATAATTAGGAACAATTAT
Downstream 100 bases:
>100_bases CAGACTATGAGTTTATATGGAACAGCGGTAAGAAAGCCCGTATCGACCGCCCTTGTATTTGTGGCGATCGTGATCTTCGG ACTTTTTTCCTTAAGCAGGT
Product: putative membrane fusion protein transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKTSQMLKVIPIATLALLMSCSGNKSEEATETQNEKVKVKVETVSVQDVEQLSEFTATVEANIKNNIAPQTPFRIEKIFA EVGDHVKAGQLLAKMDATSLKQAKIQLDNQEIEFKRIDELYKVGGASKSAWDAQKTSLEVARETYKNLVENTQLLSPISG IVTARNYDSGDMYSGGNPIYTVEEIRPVKLMVNVSESLFTKVKKGHEVDIRLDVYGDEVFKGKVNLVYPTIDPATRTFPV EIKIANSDERVRPGMFARVTMSFGHMDHVVAPDRSIVKQSGAGDRYIYVCKDGKVSYQKVKLGRRMGDKYEIISGVEDGD QVVITGQSRLTNGMEVEIENE
Sequences:
>Translated_341_residues MKTSQMLKVIPIATLALLMSCSGNKSEEATETQNEKVKVKVETVSVQDVEQLSEFTATVEANIKNNIAPQTPFRIEKIFA EVGDHVKAGQLLAKMDATSLKQAKIQLDNQEIEFKRIDELYKVGGASKSAWDAQKTSLEVARETYKNLVENTQLLSPISG IVTARNYDSGDMYSGGNPIYTVEEIRPVKLMVNVSESLFTKVKKGHEVDIRLDVYGDEVFKGKVNLVYPTIDPATRTFPV EIKIANSDERVRPGMFARVTMSFGHMDHVVAPDRSIVKQSGAGDRYIYVCKDGKVSYQKVKLGRRMGDKYEIISGVEDGD QVVITGQSRLTNGMEVEIENE >Mature_341_residues MKTSQMLKVIPIATLALLMSCSGNKSEEATETQNEKVKVKVETVSVQDVEQLSEFTATVEANIKNNIAPQTPFRIEKIFA EVGDHVKAGQLLAKMDATSLKQAKIQLDNQEIEFKRIDELYKVGGASKSAWDAQKTSLEVARETYKNLVENTQLLSPISG IVTARNYDSGDMYSGGNPIYTVEEIRPVKLMVNVSESLFTKVKKGHEVDIRLDVYGDEVFKGKVNLVYPTIDPATRTFPV EIKIANSDERVRPGMFARVTMSFGHMDHVVAPDRSIVKQSGAGDRYIYVCKDGKVSYQKVKLGRRMGDKYEIISGVEDGD QVVITGQSRLTNGMEVEIENE
Specific function: The periplasmic linker component of an organic solvent efflux pump. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can export AMP and some antib
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=173, Percent_Identity=24.2774566473988, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1789929, Length=359, Percent_Identity=23.6768802228412, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI87082036, Length=287, Percent_Identity=25.7839721254355, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786668, Length=372, Percent_Identity=22.0430107526882, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789665, Length=378, Percent_Identity=23.8095238095238, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 37923; Mature: 37923
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSQMLKVIPIATLALLMSCSGNKSEEATETQNEKVKVKVETVSVQDVEQLSEFTATVE CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEEEECHHHHHHHHHHHEEEE ANIKNNIAPQTPFRIEKIFAEVGDHVKAGQLLAKMDATSLKQAKIQLDNQEIEFKRIDEL ECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHEEEEECCCCCHHHHHHHH YKVGGASKSAWDAQKTSLEVARETYKNLVENTQLLSPISGIVTARNYDSGDMYSGGNPIY HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCCCCCCEE TVEEIRPVKLMVNVSESLFTKVKKGHEVDIRLDVYGDEVFKGKVNLVYPTIDPATRTFPV ECCCCCEEEEEEECHHHHHHHHHCCCEEEEEEEEECCEEEECEEEEEEECCCCCCCEEEE EIKIANSDERVRPGMFARVTMSFGHMDHVVAPDRSIVKQSGAGDRYIYVCKDGKVSYQKV EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHH KLGRRMGDKYEIISGVEDGDQVVITGQSRLTNGMEVEIENE HHHHHCCCCEEEECCCCCCCEEEEECHHHCCCCCEEEECCC >Mature Secondary Structure MKTSQMLKVIPIATLALLMSCSGNKSEEATETQNEKVKVKVETVSVQDVEQLSEFTATVE CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEEEEEEECHHHHHHHHHHHEEEE ANIKNNIAPQTPFRIEKIFAEVGDHVKAGQLLAKMDATSLKQAKIQLDNQEIEFKRIDEL ECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHEEEEECCCCCHHHHHHHH YKVGGASKSAWDAQKTSLEVARETYKNLVENTQLLSPISGIVTARNYDSGDMYSGGNPIY HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECCCCCCCCCCCCCEE TVEEIRPVKLMVNVSESLFTKVKKGHEVDIRLDVYGDEVFKGKVNLVYPTIDPATRTFPV ECCCCCEEEEEEECHHHHHHHHHCCCEEEEEEEEECCEEEECEEEEEEECCCCCCCEEEE EIKIANSDERVRPGMFARVTMSFGHMDHVVAPDRSIVKQSGAGDRYIYVCKDGKVSYQKV EEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCCCHHHH KLGRRMGDKYEIISGVEDGDQVVITGQSRLTNGMEVEIENE HHHHHCCCCEEEECCCCCCCEEEEECHHHCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11395460 [H]