| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is nolG [H]
Identifier: 150007000
GI number: 150007000
Start: 382995
End: 384836
Strand: Reverse
Name: nolG [H]
Synonym: BDI_0336
Alternate gene names: 150007000
Gene position: 384836-382995 (Counterclockwise)
Preceding gene: 150007001
Following gene: 150006999
Centisome position: 8.0
GC content: 49.67
Gene sequence:
>1842_bases ATGAGTTTATATGGAACAGCGGTAAGAAAGCCCGTATCGACCGCCCTTGTATTTGTGGCGATCGTGATCTTCGGACTTTT TTCCTTAAGCAGGTTATCAGTGGACTTGCTTCCGGAGATAGAGACGAACACCATCATGGTGATGACGGCCTATCCCGGCG CCAGTGCTTCGGATATCGAGATGAATGTTTCGAAGCCCTTGGAAAACGTGTTGAATAGCGTAAGCGACTTGAAGCATATC ACGTCGCAATCCCGTGAGAATATATCGATCGTAACGTTGGAATTTAATTATGGCATCGATATCGATGTCGCCACAAACGA TGTCCGCGACAAACTGGACATGGTAGAGTCTTCCCTACCCGATGACGTAGAGAATCCGATCATCTTCAAGTTCGGTACGG ACGATATCCCCATCTTGATCCTTTCCGTGACCGCGGAGGAGAGCACGAACGCTCTTTACAAGATCTTGGACGATAAGGTA TCCAACCCATTGGCCCGTATCAGTGGCGTGGGTGCCGTGTCTATCTCCGGTACGCCGATCCGTGAGTTGCAAGTGTATTG CGACCCGTACAAGTTGGAGGCTTACGGCCAGACCATCGAAGGTATCTCTACCATCATCGCGCAAGAGAACCGGAATACAC CGGGAGGTAGCGTAGATATCGGTTCTAATACCTACTCCTTGCGTGTTCAAGGAGAATTCACGGACGCTAAGCAGATGCTA GACCTAGTGATCGGTAGCCAGAACGGAAAGAACGTATATCTGCGTGACGTGGCCCGTGTAGAGGACAGTATCGAGGAACG TGCGCAAGAAACGTTCAACAACGGCACGAAAGGTGGTATGATCGTCATACAGAAACAGTCCGGAGCGAACTCGGTGAACA TCGCCAAGAAGGTACACCAGGAACTTCCGGAGATACAGGCTAGCTTACCCTCAGACGTGAAGCTGGACGTAATCATGGAT ACTTCCACGAATATCTTGAATACGATCGATAGCTTGAAAGAGACGATCATGATTACCTTTATCATCGTTATGTTGGTGGT ATTCGTGTTCTTGGGACGCTGGAGGGCTACGTTTATCATTATCTTAACCATCCCGATCTCCTTGATCGCTTCTTTCGCTT ATTTGCTGGCCTCGGGCAATACGTTAAACATTATCTCATTGAGCTCACTTTCTATCGCTATCGGTATGGTGGTGGACGAC GCTATCGTGGTATTGGAGAACGTAACGACCCATATCGAGCGGGGTAGCCAGCCGAAACAGGCCGCTGTACACGCCACGAA CGAGGTGGCTATCTCGGTTATCGCCTCCACCCTTACGATGTTAGCGGTGTTCTTGCCGTTGACGATGGTTACGGGTATGG CGGGTATCTTATTTAAGCAGTTGGGATGGATCGTTAGTATCATCATGATCGTTTCTACGGTAGGCGCCTTGACATTGACC CCGATGCTTTGCTCACAGTTATTACGCCAGCAACCGGAGAAGGGTAAATTGTACCGGATGTTCTTCACGCCTATCGAAAA GGGATTGAACGCCTTGGATCGCAGTTACGGACGCTTCTTGAACTGGGCCGTACGCCACCGGAAAACGGTGATCGTAGGCG CTACGCTGATCTTCATCGGCAGTATGATGCTGATCCCGGTTATCAAGACGGAATTTTTCCCGACACAAGATAACGCACGC ATCGGCATAACGATTGAGTTGCCGATCGGTACACGGCAGGATATTACCCGTGAGTTAGCTCTCGACATCGACAAGAAGTT CCGTGAGAAATATCCGGAGATCCTAATCAGTAACTTCACGGAAGGTACGGCGGATACGGATAGAACCGTATGCGCTTCAT GA
Upstream 100 bases:
>100_bases GATCATATCCGGAGTGGAGGATGGCGACCAAGTGGTTATCACCGGGCAAAGCCGCCTGACGAACGGTATGGAAGTTGAAA TCGAAAACGAATAACAGACT
Downstream 100 bases:
>100_bases GAATGTGTATGGAAGAGGTGATGAAAGCAGCAGGTTCCGACATGGCCGTAACCGTAAAGACCAATATGCGGGACGGGTTC AAGGGAGGACTTGAAATAGA
Product: putative cation efflux transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MSLYGTAVRKPVSTALVFVAIVIFGLFSLSRLSVDLLPEIETNTIMVMTAYPGASASDIEMNVSKPLENVLNSVSDLKHI TSQSRENISIVTLEFNYGIDIDVATNDVRDKLDMVESSLPDDVENPIIFKFGTDDIPILILSVTAEESTNALYKILDDKV SNPLARISGVGAVSISGTPIRELQVYCDPYKLEAYGQTIEGISTIIAQENRNTPGGSVDIGSNTYSLRVQGEFTDAKQML DLVIGSQNGKNVYLRDVARVEDSIEERAQETFNNGTKGGMIVIQKQSGANSVNIAKKVHQELPEIQASLPSDVKLDVIMD TSTNILNTIDSLKETIMITFIIVMLVVFVFLGRWRATFIIILTIPISLIASFAYLLASGNTLNIISLSSLSIAIGMVVDD AIVVLENVTTHIERGSQPKQAAVHATNEVAISVIASTLTMLAVFLPLTMVTGMAGILFKQLGWIVSIIMIVSTVGALTLT PMLCSQLLRQQPEKGKLYRMFFTPIEKGLNALDRSYGRFLNWAVRHRKTVIVGATLIFIGSMMLIPVIKTEFFPTQDNAR IGITIELPIGTRQDITRELALDIDKKFREKYPEILISNFTEGTADTDRTVCAS
Sequences:
>Translated_613_residues MSLYGTAVRKPVSTALVFVAIVIFGLFSLSRLSVDLLPEIETNTIMVMTAYPGASASDIEMNVSKPLENVLNSVSDLKHI TSQSRENISIVTLEFNYGIDIDVATNDVRDKLDMVESSLPDDVENPIIFKFGTDDIPILILSVTAEESTNALYKILDDKV SNPLARISGVGAVSISGTPIRELQVYCDPYKLEAYGQTIEGISTIIAQENRNTPGGSVDIGSNTYSLRVQGEFTDAKQML DLVIGSQNGKNVYLRDVARVEDSIEERAQETFNNGTKGGMIVIQKQSGANSVNIAKKVHQELPEIQASLPSDVKLDVIMD TSTNILNTIDSLKETIMITFIIVMLVVFVFLGRWRATFIIILTIPISLIASFAYLLASGNTLNIISLSSLSIAIGMVVDD AIVVLENVTTHIERGSQPKQAAVHATNEVAISVIASTLTMLAVFLPLTMVTGMAGILFKQLGWIVSIIMIVSTVGALTLT PMLCSQLLRQQPEKGKLYRMFFTPIEKGLNALDRSYGRFLNWAVRHRKTVIVGATLIFIGSMMLIPVIKTEFFPTQDNAR IGITIELPIGTRQDITRELALDIDKKFREKYPEILISNFTEGTADTDRTVCAS >Mature_612_residues SLYGTAVRKPVSTALVFVAIVIFGLFSLSRLSVDLLPEIETNTIMVMTAYPGASASDIEMNVSKPLENVLNSVSDLKHIT SQSRENISIVTLEFNYGIDIDVATNDVRDKLDMVESSLPDDVENPIIFKFGTDDIPILILSVTAEESTNALYKILDDKVS NPLARISGVGAVSISGTPIRELQVYCDPYKLEAYGQTIEGISTIIAQENRNTPGGSVDIGSNTYSLRVQGEFTDAKQMLD LVIGSQNGKNVYLRDVARVEDSIEERAQETFNNGTKGGMIVIQKQSGANSVNIAKKVHQELPEIQASLPSDVKLDVIMDT STNILNTIDSLKETIMITFIIVMLVVFVFLGRWRATFIIILTIPISLIASFAYLLASGNTLNIISLSSLSIAIGMVVDDA IVVLENVTTHIERGSQPKQAAVHATNEVAISVIASTLTMLAVFLPLTMVTGMAGILFKQLGWIVSIIMIVSTVGALTLTP MLCSQLLRQQPEKGKLYRMFFTPIEKGLNALDRSYGRFLNWAVRHRKTVIVGATLIFIGSMMLIPVIKTEFFPTQDNARI GITIELPIGTRQDITRELALDIDKKFREKYPEILISNFTEGTADTDRTVCAS
Specific function: Involved in the production of Medicago-specific nodulation signal molecule [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788390, Length=563, Percent_Identity=33.214920071048, Blast_Score=311, Evalue=5e-86, Organism=Escherichia coli, GI1788391, Length=563, Percent_Identity=33.0373001776199, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1789930, Length=581, Percent_Identity=29.4320137693632, Blast_Score=228, Evalue=8e-61, Organism=Escherichia coli, GI1788814, Length=606, Percent_Identity=26.5676567656766, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1786667, Length=597, Percent_Identity=25.2931323283082, Blast_Score=208, Evalue=7e-55, Organism=Escherichia coli, GI1789666, Length=589, Percent_Identity=26.6553480475382, Blast_Score=205, Evalue=7e-54, Organism=Escherichia coli, GI1786788, Length=553, Percent_Identity=26.2206148282098, Blast_Score=169, Evalue=5e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001036 [H]
Pfam domain/function: PF00873 ACR_tran [H]
EC number: NA
Molecular weight: Translated: 67143; Mature: 67012
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLYGTAVRKPVSTALVFVAIVIFGLFSLSRLSVDLLPEIETNTIMVMTAYPGASASDIE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCCCCCCEE MNVSKPLENVLNSVSDLKHITSQSRENISIVTLEFNYGIDIDVATNDVRDKLDMVESSLP EEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHCCC DDVENPIIFKFGTDDIPILILSVTAEESTNALYKILDDKVSNPLARISGVGAVSISGTPI CCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCH RELQVYCDPYKLEAYGQTIEGISTIIAQENRNTPGGSVDIGSNTYSLRVQGEFTDAKQML HHEEEEECCEEEHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEECCHHHHHHH DLVIGSQNGKNVYLRDVARVEDSIEERAQETFNNGTKGGMIVIQKQSGANSVNIAKKVHQ HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH ELPEIQASLPSDVKLDVIMDTSTNILNTIDSLKETIMITFIIVMLVVFVFLGRWRATFII HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEE ILTIPISLIASFAYLLASGNTLNIISLSSLSIAIGMVVDDAIVVLENVTTHIERGSQPKQ EEHHHHHHHHHHHHHHHCCCEEEEEEECCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCHH AAVHATNEVAISVIASTLTMLAVFLPLTMVTGMAGILFKQLGWIVSIIMIVSTVGALTLT HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLCSQLLRQQPEKGKLYRMFFTPIEKGLNALDRSYGRFLNWAVRHRKTVIVGATLIFIG HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHH SMMLIPVIKTEFFPTQDNARIGITIELPIGTRQDITRELALDIDKKFREKYPEILISNFT HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCC EGTADTDRTVCAS CCCCCCCCCCCCC >Mature Secondary Structure SLYGTAVRKPVSTALVFVAIVIFGLFSLSRLSVDLLPEIETNTIMVMTAYPGASASDIE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCCCCCCEE MNVSKPLENVLNSVSDLKHITSQSRENISIVTLEFNYGIDIDVATNDVRDKLDMVESSLP EEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHCCC DDVENPIIFKFGTDDIPILILSVTAEESTNALYKILDDKVSNPLARISGVGAVSISGTPI CCCCCCEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCH RELQVYCDPYKLEAYGQTIEGISTIIAQENRNTPGGSVDIGSNTYSLRVQGEFTDAKQML HHEEEEECCEEEHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEECCHHHHHHH DLVIGSQNGKNVYLRDVARVEDSIEERAQETFNNGTKGGMIVIQKQSGANSVNIAKKVHQ HHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHH ELPEIQASLPSDVKLDVIMDTSTNILNTIDSLKETIMITFIIVMLVVFVFLGRWRATFII HHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEE ILTIPISLIASFAYLLASGNTLNIISLSSLSIAIGMVVDDAIVVLENVTTHIERGSQPKQ EEHHHHHHHHHHHHHHHCCCEEEEEEECCHHEEHHHHHHHHHHHHHHHHHHHHCCCCCHH AAVHATNEVAISVIASTLTMLAVFLPLTMVTGMAGILFKQLGWIVSIIMIVSTVGALTLT HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PMLCSQLLRQQPEKGKLYRMFFTPIEKGLNALDRSYGRFLNWAVRHRKTVIVGATLIFIG HHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHH SMMLIPVIKTEFFPTQDNARIGITIELPIGTRQDITRELALDIDKKFREKYPEILISNFT HHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHHHCCC EGTADTDRTVCAS CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1909418; 11481432 [H]