| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150006790
Identifier: 150006790
GI number: 150006790
Start: 126052
End: 126888
Strand: Reverse
Name: 150006790
Synonym: BDI_0116
Alternate gene names: NA
Gene position: 126888-126052 (Counterclockwise)
Preceding gene: 150006791
Following gene: 150006781
Centisome position: 2.64
GC content: 44.92
Gene sequence:
>837_bases ATGAGAACAAGAATGATGGCCTTATTTGCGTTGATCGCTTTTTGCGCAATGCCTATCGAGGCGAAGAAAGTAAAAGGAAA TGGGGATATTATCACGAAAGAAATCTCCGTCAGAGACTATTCAGCGATAAAAGTCGGCTCAACCGCCATGGGGTATAGCG ACAGTTGGTTCAGCCTATTCAGCCGTGGGGGAAATCCGTCGTACGTTTTCGGATATACGCAAGGAGAATCAGCGTCCTTA CGAATCACGATCGACGAGAACTTATATCCTTATATAAACGTTCAAGTAAAAAACGAAGAACTTTCAATCTCCACAGAGAA TGGTACACAATTAAGCCCTACCCGATTTAAAATAGAGGGCACTTCCAAGAAGCTGGAAAAAATCAAGATGTCCGGTTGTA TGGATTTTGTCCTGAGAAGCGCTTTATCCGGAGATGATCTGGAAATTATAGCGACAAGGGGTAGCGACGTGAAAATGGAG CAGCCAATCAACGTATCCAATTGCATAATTGAGGCGACCAGCGGTAGCGATATCATCATCAACGATCTTACTACCCGAAT AATACGAGGCCGTGCCAGCGGAGGTAGCGATCTCAAGCTTACGGGAAAAGCGGAGAACGGCGAATATTCCGCCTCAGGTG GCTCCGATATCAAGGCTTATGATCTTATCTTAAACCAGTTGGAATGTTCCGCCAGTGGTGGCTCCGATATTTATACACAC GTAACCGATTATATCAAGGCTTCGGCAAGCGGAGGTAGTGATGTACATTACAAAGGTTCGGCAAGATCGGATACATCCAC TTCCGGAGGAAGCGATATTATAAAAGAGGGTAATTAA
Upstream 100 bases:
>100_bases AAGAAAGTCAATGATAGCTTCTTTTTTTTCATTTTAGATGTAACGTTTTTTCAACTCCATTCGTCTTATAAGAAAAGAGT ATAAATTAATTACACTTCAT
Downstream 100 bases:
>100_bases TACCCTCTTTTTCACCCTCTTATACATTGAATTTTATAACAAAAGTACTTCCTTTTCCAACTGCGCTATCAACAGAAAGA GTTCCTCCATGAGCTTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MRTRMMALFALIAFCAMPIEAKKVKGNGDIITKEISVRDYSAIKVGSTAMGYSDSWFSLFSRGGNPSYVFGYTQGESASL RITIDENLYPYINVQVKNEELSISTENGTQLSPTRFKIEGTSKKLEKIKMSGCMDFVLRSALSGDDLEIIATRGSDVKME QPINVSNCIIEATSGSDIIINDLTTRIIRGRASGGSDLKLTGKAENGEYSASGGSDIKAYDLILNQLECSASGGSDIYTH VTDYIKASASGGSDVHYKGSARSDTSTSGGSDIIKEGN
Sequences:
>Translated_278_residues MRTRMMALFALIAFCAMPIEAKKVKGNGDIITKEISVRDYSAIKVGSTAMGYSDSWFSLFSRGGNPSYVFGYTQGESASL RITIDENLYPYINVQVKNEELSISTENGTQLSPTRFKIEGTSKKLEKIKMSGCMDFVLRSALSGDDLEIIATRGSDVKME QPINVSNCIIEATSGSDIIINDLTTRIIRGRASGGSDLKLTGKAENGEYSASGGSDIKAYDLILNQLECSASGGSDIYTH VTDYIKASASGGSDVHYKGSARSDTSTSGGSDIIKEGN >Mature_278_residues MRTRMMALFALIAFCAMPIEAKKVKGNGDIITKEISVRDYSAIKVGSTAMGYSDSWFSLFSRGGNPSYVFGYTQGESASL RITIDENLYPYINVQVKNEELSISTENGTQLSPTRFKIEGTSKKLEKIKMSGCMDFVLRSALSGDDLEIIATRGSDVKME QPINVSNCIIEATSGSDIIINDLTTRIIRGRASGGSDLKLTGKAENGEYSASGGSDIKAYDLILNQLECSASGGSDIYTH VTDYIKASASGGSDVHYKGSARSDTSTSGGSDIIKEGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29810; Mature: 29810
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRMMALFALIAFCAMPIEAKKVKGNGDIITKEISVRDYSAIKVGSTAMGYSDSWFSLF CCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHH SRGGNPSYVFGYTQGESASLRITIDENLYPYINVQVKNEELSISTENGTQLSPTRFKIEG HCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCEECCEEEEEEC TSKKLEKIKMSGCMDFVLRSALSGDDLEIIATRGSDVKMEQPINVSNCIIEATSGSDIII CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCCEEEE NDLTTRIIRGRASGGSDLKLTGKAENGEYSASGGSDIKAYDLILNQLECSASGGSDIYTH HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCHHHHH VTDYIKASASGGSDVHYKGSARSDTSTSGGSDIIKEGN HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MRTRMMALFALIAFCAMPIEAKKVKGNGDIITKEISVRDYSAIKVGSTAMGYSDSWFSLF CCHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHH SRGGNPSYVFGYTQGESASLRITIDENLYPYINVQVKNEELSISTENGTQLSPTRFKIEG HCCCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEECCEEEEEECCCCEECCEEEEEEC TSKKLEKIKMSGCMDFVLRSALSGDDLEIIATRGSDVKMEQPINVSNCIIEATSGSDIII CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCCEEEEECCCCEEEE NDLTTRIIRGRASGGSDLKLTGKAENGEYSASGGSDIKAYDLILNQLECSASGGSDIYTH HHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCCHHHHH VTDYIKASASGGSDVHYKGSARSDTSTSGGSDIIKEGN HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA